RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 TGFB2P61812 414 aa26.78■■□□□ 1.88
APOE-203ENST00000434152 VSIG10Q8N0Z9 540 aa26.78■■□□□ 1.88
APOE-203ENST00000434152 TJP1Q07157 1748 aa26.77■■□□□ 1.88
APOE-203ENST00000434152 KCPQ6ZWJ8 1503 aa26.76■■□□□ 1.87
APOE-203ENST00000434152 SOS1Q07889 1333 aaPredicted RBP26.76■■□□□ 1.87
APOE-203ENST00000434152 A0A0G2JLW4 131 aa26.76■■□□□ 1.87
APOE-203ENST00000434152 CCDC184Q52MB2 194 aa26.76■■□□□ 1.87
APOE-203ENST00000434152 TTC5Q8N0Z6 440 aa26.75■■□□□ 1.87
APOE-203ENST00000434152 USPL1Q5W0Q7 1092 aa26.74■■□□□ 1.87
APOE-203ENST00000434152 PNISRQ8TF01 805 aaKnown RBP26.74■■□□□ 1.87
APOE-203ENST00000434152 MRS2Q9HD23 443 aa26.74■■□□□ 1.87
APOE-203ENST00000434152 ZBTB1Q9Y2K1 713 aa26.74■■□□□ 1.87
APOE-203ENST00000434152 ZPR1O75312 459 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 TM4SF1P30408 202 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 TMPOP42166 694 aaKnown RBP26.73■■□□□ 1.87
APOE-203ENST00000434152 DDR1Q08345 913 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 LMOD3Q0VAK6 560 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 ZNF790Q6PG37 636 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 MCM10Q7L590 875 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 ZNF496Q96IT1 587 aaPredicted RBP26.73■■□□□ 1.87
APOE-203ENST00000434152 PXDNLA1KZ92 1463 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 C10orf71Q711Q0 1435 aa26.73■■□□□ 1.87
APOE-203ENST00000434152 DPEP1P16444 411 aa26.72■■□□□ 1.87
APOE-203ENST00000434152 RIPK4P57078 832 aa26.71■■□□□ 1.87
APOE-203ENST00000434152 STARD3NLO95772 234 aa26.7■■□□□ 1.86
APOE-203ENST00000434152 CANXP27824 592 aaKnown RBP26.7■■□□□ 1.86
APOE-203ENST00000434152 CCDC146Q8IYE0 955 aa26.7■■□□□ 1.86
APOE-203ENST00000434152 NARFQ9UHQ1 456 aa26.7■■□□□ 1.86
APOE-203ENST00000434152 C4AP0C0L4 1744 aa26.7■■□□□ 1.86
APOE-203ENST00000434152 BTBD11A6QL63 1104 aa26.69■■□□□ 1.86
APOE-203ENST00000434152 DCTN1Q14203 1278 aa26.69■■□□□ 1.86
APOE-203ENST00000434152 TAF7Q15545 349 aaPredicted RBP26.69■■□□□ 1.86
APOE-203ENST00000434152 BCS1LQ9Y276 419 aa26.69■■□□□ 1.86
APOE-203ENST00000434152 POLRMTO00411 1230 aaKnown RBP26.68■■□□□ 1.86
APOE-203ENST00000434152 KCNA3P22001 575 aa26.68■■□□□ 1.86
APOE-203ENST00000434152 C1QTNF8P60827 252 aa26.68■■□□□ 1.86
APOE-203ENST00000434152 KCNQ3O43525 872 aa26.67■■□□□ 1.86
APOE-203ENST00000434152 TEX13AQ9BXU3 409 aaPredicted RBP26.67■■□□□ 1.86
APOE-203ENST00000434152 COL15A1P39059 1388 aa26.67■■□□□ 1.86
APOE-203ENST00000434152 HEG1Q9ULI3 1381 aa26.67■■□□□ 1.86
APOE-203ENST00000434152 EIF5P55010 431 aaKnown RBP26.66■■□□□ 1.86
APOE-203ENST00000434152 BCL2L12Q9HB09 334 aa26.66■■□□□ 1.86
APOE-203ENST00000434152 KIF13BQ9NQT8 1826 aa26.66■■□□□ 1.86
APOE-203ENST00000434152 KDM3BQ7LBC6 1761 aa26.66■■□□□ 1.86
APOE-203ENST00000434152 GIGYF1O75420 1035 aaPredicted RBP26.65■■□□□ 1.86
APOE-203ENST00000434152 NFIXQ14938 502 aa26.65■■□□□ 1.86
APOE-203ENST00000434152 FMNL2Q96PY5 1086 aa26.65■■□□□ 1.86
APOE-203ENST00000434152 ATP10DQ9P241 1426 aa26.65■■□□□ 1.86
APOE-203ENST00000434152 BABAM1Q9NWV8 329 aa26.64■■□□□ 1.86
APOE-203ENST00000434152 KIAA1551Q9HCM1 1747 aa26.62■■□□□ 1.85
APOE-203ENST00000434152 NCBP3Q53F19 620 aaKnown RBP26.62■■□□□ 1.85
APOE-203ENST00000434152 PIM2Q9P1W9 311 aa26.62■■□□□ 1.85
APOE-203ENST00000434152 N4BP2Q86UW6 1770 aaPredicted RBP26.61■■□□□ 1.85
APOE-203ENST00000434152 ADCY9O60503 1353 aa26.61■■□□□ 1.85
APOE-203ENST00000434152 A0A087WZG4 1122 aa26.61■■□□□ 1.85
APOE-203ENST00000434152 ARHGAP27Q6ZUM4 889 aa26.61■■□□□ 1.85
APOE-203ENST00000434152 TRIM35Q9UPQ4 493 aa26.61■■□□□ 1.85
APOE-203ENST00000434152 APAF1O14727 1248 aa26.6■■□□□ 1.85
APOE-203ENST00000434152 A1BGP04217 495 aa26.6■■□□□ 1.85
APOE-203ENST00000434152 CHRNA5P30532 468 aa26.6■■□□□ 1.85
APOE-203ENST00000434152 RRP7AQ9Y3A4 280 aaKnown RBP26.6■■□□□ 1.85
APOE-203ENST00000434152 SERPINB2P05120 415 aa26.59■■□□□ 1.85
APOE-203ENST00000434152 NEUROD2Q15784 382 aa26.59■■□□□ 1.85
APOE-203ENST00000434152 ZNF526Q8TF50 670 aaPredicted RBP26.58■■□□□ 1.85
APOE-203ENST00000434152 THUMPD2Q9BTF0 503 aaKnown RBP26.58■■□□□ 1.85
APOE-203ENST00000434152 GPBP1L1Q9HC44 474 aaPredicted RBP26.58■■□□□ 1.85
APOE-203ENST00000434152 TBC1D2BQ9UPU7 963 aa26.58■■□□□ 1.85
APOE-203ENST00000434152 USP16Q9Y5T5 823 aa26.58■■□□□ 1.85
APOE-203ENST00000434152 CCER2I3L3R5 266 aa26.57■■□□□ 1.84
APOE-203ENST00000434152 IL6STP40189 918 aaPredicted RBP26.57■■□□□ 1.84
APOE-203ENST00000434152 DALRD3Q5D0E6 543 aaKnown RBP26.57■■□□□ 1.84
APOE-203ENST00000434152 ZNF330Q9Y3S2 320 aaPredicted RBP26.57■■□□□ 1.84
APOE-203ENST00000434152 BICDL1Q6ZP65 573 aa26.56■■□□□ 1.84
APOE-203ENST00000434152 PRAMEF22A3QJZ6 481 aa26.55■■□□□ 1.84
APOE-203ENST00000434152 DIEXFQ68CQ4 756 aaKnown RBP26.55■■□□□ 1.84
APOE-203ENST00000434152 SNRPA1P09661 255 aaKnown RBP26.54■■□□□ 1.84
APOE-203ENST00000434152 CCDC27Q2M243 656 aa26.54■■□□□ 1.84
APOE-203ENST00000434152 CALD1Q05682 793 aaKnown RBP26.53■■□□□ 1.84
APOE-203ENST00000434152 TBC1D9BQ66K14 1250 aa26.53■■□□□ 1.84
APOE-203ENST00000434152 SENP3-EIF4A1A0A087X0R7 540 aa26.52■■□□□ 1.84
APOE-203ENST00000434152 LAMB4A4D0S4 1761 aa26.52■■□□□ 1.84
APOE-203ENST00000434152 MIS18AQ9NYP9 233 aa26.52■■□□□ 1.84
APOE-203ENST00000434152 CHL1O00533 1208 aa26.51■■□□□ 1.83
APOE-203ENST00000434152 PIP4K2AP48426 406 aaPredicted RBP26.51■■□□□ 1.83
APOE-203ENST00000434152 EIF4A1P60842 406 aaKnown RBP26.51■■□□□ 1.83
APOE-203ENST00000434152 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
APOE-203ENST00000434152 TSPYL4Q9UJ04 414 aa26.51■■□□□ 1.83
APOE-203ENST00000434152 NGEFQ8N5V2 710 aa26.5■■□□□ 1.83
APOE-203ENST00000434152 CAMTA2O94983 1202 aa26.49■■□□□ 1.83
APOE-203ENST00000434152 CFAP44Q96MT7 982 aa26.49■■□□□ 1.83
APOE-203ENST00000434152 FAM9BQ8IZU0 186 aa26.48■■□□□ 1.83
APOE-203ENST00000434152 BRCA1P38398 1863 aaKnown RBP26.47■■□□□ 1.83
APOE-203ENST00000434152 C9orf131Q5VYM1 1079 aa26.47■■□□□ 1.83
APOE-203ENST00000434152 DZIP3Q86Y13 1208 aaKnown RBP26.47■■□□□ 1.83
APOE-203ENST00000434152 C2CD5Q86YS7 1000 aa26.47■■□□□ 1.83
APOE-203ENST00000434152 ZNF853P0CG23 659 aa26.46■■□□□ 1.83
APOE-203ENST00000434152 IFT57Q9NWB7 429 aa26.46■■□□□ 1.83
APOE-203ENST00000434152 CARMIL3Q8ND23 1372 aa26.46■■□□□ 1.83
APOE-203ENST00000434152 NBPF26B4DH59 902 aa26.45■■□□□ 1.82
APOE-203ENST00000434152 NBPF10Q6P3W6 841 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms