RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
TRAPPC4-202ENST00000434101 COL15A1P39059 1388 aa17.43■□□□□ 0.38
TRAPPC4-202ENST00000434101 ZPR1O75312 459 aa17.43■□□□□ 0.38
TRAPPC4-202ENST00000434101 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
TRAPPC4-202ENST00000434101 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
TRAPPC4-202ENST00000434101 KCNQ3O43525 872 aa17.42■□□□□ 0.38
TRAPPC4-202ENST00000434101 GPR162Q16538 588 aa17.42■□□□□ 0.38
TRAPPC4-202ENST00000434101 KIF13BQ9NQT8 1826 aa17.42■□□□□ 0.38
TRAPPC4-202ENST00000434101 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
TRAPPC4-202ENST00000434101 A0A087WZG4 1122 aa17.41■□□□□ 0.38
TRAPPC4-202ENST00000434101 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
TRAPPC4-202ENST00000434101 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
TRAPPC4-202ENST00000434101 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
TRAPPC4-202ENST00000434101 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
TRAPPC4-202ENST00000434101 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-202ENST00000434101 RIPK4P57078 832 aa17.4■□□□□ 0.38
TRAPPC4-202ENST00000434101 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-202ENST00000434101 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-202ENST00000434101 NARFQ9UHQ1 456 aa17.4■□□□□ 0.38
TRAPPC4-202ENST00000434101 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
TRAPPC4-202ENST00000434101 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC4-202ENST00000434101 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-202ENST00000434101 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-202ENST00000434101 FKBP8Q14318 412 aa17.38■□□□□ 0.37
TRAPPC4-202ENST00000434101 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
TRAPPC4-202ENST00000434101 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
TRAPPC4-202ENST00000434101 YY1P25490 414 aa17.37■□□□□ 0.37
TRAPPC4-202ENST00000434101 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
TRAPPC4-202ENST00000434101 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
TRAPPC4-202ENST00000434101 A1BGP04217 495 aa17.36■□□□□ 0.37
TRAPPC4-202ENST00000434101 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
TRAPPC4-202ENST00000434101 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
TRAPPC4-202ENST00000434101 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC4-202ENST00000434101 USP16Q9Y5T5 823 aa17.36■□□□□ 0.37
TRAPPC4-202ENST00000434101 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
TRAPPC4-202ENST00000434101 GRIN3BO60391 1043 aa17.35■□□□□ 0.37
TRAPPC4-202ENST00000434101 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
TRAPPC4-202ENST00000434101 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC4-202ENST00000434101 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-202ENST00000434101 ANP32CO43423 234 aa17.34■□□□□ 0.37
TRAPPC4-202ENST00000434101 TM4SF1P30408 202 aa17.34■□□□□ 0.37
TRAPPC4-202ENST00000434101 TGFB2P61812 414 aa17.34■□□□□ 0.37
TRAPPC4-202ENST00000434101 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
TRAPPC4-202ENST00000434101 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 DDR1Q08345 913 aa17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 BCORQ6W2J9 1755 aa17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.36
TRAPPC4-202ENST00000434101 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
TRAPPC4-202ENST00000434101 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAPPC4-202ENST00000434101 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
TRAPPC4-202ENST00000434101 NFIXQ14938 502 aa17.32■□□□□ 0.36
TRAPPC4-202ENST00000434101 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
TRAPPC4-202ENST00000434101 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
TRAPPC4-202ENST00000434101 NRXN2Q9P2S2 1712 aa17.31■□□□□ 0.36
TRAPPC4-202ENST00000434101 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC4-202ENST00000434101 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
TRAPPC4-202ENST00000434101 BRCA1P38398 1863 aaKnown RBP17.31■□□□□ 0.36
TRAPPC4-202ENST00000434101 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
TRAPPC4-202ENST00000434101 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC4-202ENST00000434101 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
TRAPPC4-202ENST00000434101 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
TRAPPC4-202ENST00000434101 SERPINB2P05120 415 aa17.28■□□□□ 0.36
TRAPPC4-202ENST00000434101 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
TRAPPC4-202ENST00000434101 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
TRAPPC4-202ENST00000434101 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
TRAPPC4-202ENST00000434101 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
TRAPPC4-202ENST00000434101 DPEP1P16444 411 aa17.27■□□□□ 0.36
TRAPPC4-202ENST00000434101 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
TRAPPC4-202ENST00000434101 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
TRAPPC4-202ENST00000434101 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
TRAPPC4-202ENST00000434101 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
TRAPPC4-202ENST00000434101 ARFGEF1Q9Y6D6 1849 aa17.26■□□□□ 0.35
TRAPPC4-202ENST00000434101 APAF1O14727 1248 aa17.26■□□□□ 0.35
TRAPPC4-202ENST00000434101 RGL2O15211 777 aa17.26■□□□□ 0.35
TRAPPC4-202ENST00000434101 WWC3Q9ULE0 1092 aa17.26■□□□□ 0.35
TRAPPC4-202ENST00000434101 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
TRAPPC4-202ENST00000434101 ERBB4Q15303 1308 aa17.25■□□□□ 0.35
TRAPPC4-202ENST00000434101 CHL1O00533 1208 aa17.25■□□□□ 0.35
TRAPPC4-202ENST00000434101 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
TRAPPC4-202ENST00000434101 MRS2Q9HD23 443 aa17.25■□□□□ 0.35
TRAPPC4-202ENST00000434101 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
TRAPPC4-202ENST00000434101 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-202ENST00000434101 NUP98P52948 1817 aa17.24■□□□□ 0.35
TRAPPC4-202ENST00000434101 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-202ENST00000434101 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
TRAPPC4-202ENST00000434101 BCS1LQ9Y276 419 aa17.24■□□□□ 0.35
TRAPPC4-202ENST00000434101 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
TRAPPC4-202ENST00000434101 UTRNP46939 3433 aa17.23■□□□□ 0.35
TRAPPC4-202ENST00000434101 NPHP1O15259 732 aa17.22■□□□□ 0.35
TRAPPC4-202ENST00000434101 KIF6Q6ZMV9 814 aa17.22■□□□□ 0.35
TRAPPC4-202ENST00000434101 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
TRAPPC4-202ENST00000434101 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
TRAPPC4-202ENST00000434101 MYL6BP14649 208 aa17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 KCNA3P22001 575 aa17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 CHRNA5P30532 468 aa17.21■□□□□ 0.35
TRAPPC4-202ENST00000434101 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms