RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NEFLP07196 543 aa33.82■■■■□ 3
TMEM248-205ENST00000433271 ARHGAP45Q92619 1136 aa33.82■■■■□ 3
TMEM248-205ENST00000433271 LAMB4A4D0S4 1761 aa33.82■■■■□ 3
TMEM248-205ENST00000433271 TRIM37O94972 964 aa33.81■■■■□ 3
TMEM248-205ENST00000433271 DNAJC10Q8IXB1 793 aa33.8■■■■□ 3
TMEM248-205ENST00000433271 DDX21Q9NR30 783 aaKnown RBP eCLIP33.8■■■■□ 3
TMEM248-205ENST00000433271 EP400Q96L91 3159 aa33.8■■■■□ 3
TMEM248-205ENST00000433271 STARD3NLO95772 234 aa33.79■■■■□ 3
TMEM248-205ENST00000433271 ERBB4Q15303 1308 aa33.79■■■■□ 3
TMEM248-205ENST00000433271 PDIA6Q15084 440 aa33.79■■■■□ 3
TMEM248-205ENST00000433271 ATF7IPQ6VMQ6 1270 aa33.79■■■■□ 3
TMEM248-205ENST00000433271 ATP6V1AP38606 617 aa33.78■■■■□ 3
TMEM248-205ENST00000433271 PTPRCP08575 1304 aa33.77■■■■□ 3
TMEM248-205ENST00000433271 PDE3AQ14432 1141 aa33.77■■■■□ 3
TMEM248-205ENST00000433271 HYPKQ9NX55 129 aa33.77■■■■□ 3
TMEM248-205ENST00000433271 G2E3Q7L622 706 aa33.76■■■■□ 3
TMEM248-205ENST00000433271 TRIM27P14373 513 aa33.75■■■□□ 2.99
TMEM248-205ENST00000433271 ZNF831Q5JPB2 1677 aa33.75■■■□□ 2.99
TMEM248-205ENST00000433271 CYP19A1P11511 503 aaPredicted RBP33.75■■■□□ 2.99
TMEM248-205ENST00000433271 MS4A1P11836 297 aa33.75■■■□□ 2.99
TMEM248-205ENST00000433271 FLIIQ13045 1269 aa33.75■■■□□ 2.99
TMEM248-205ENST00000433271 PROSER3Q2NL68 480 aa33.75■■■□□ 2.99
TMEM248-205ENST00000433271 IRX6P78412 446 aaPredicted RBP33.74■■■□□ 2.99
TMEM248-205ENST00000433271 C20orf194Q5TEA3 1177 aa33.74■■■□□ 2.99
TMEM248-205ENST00000433271 CICQ96RK0 1608 aaPredicted RBP33.74■■■□□ 2.99
TMEM248-205ENST00000433271 ANXA1P04083 346 aa33.73■■■□□ 2.99
TMEM248-205ENST00000433271 API5Q9BZZ5 524 aaKnown RBP33.73■■■□□ 2.99
TMEM248-205ENST00000433271 TJP1Q07157 1748 aa33.73■■■□□ 2.99
TMEM248-205ENST00000433271 A1BGP04217 495 aa33.72■■■□□ 2.99
TMEM248-205ENST00000433271 PHAXQ9H814 394 aaKnown RBP33.72■■■□□ 2.99
TMEM248-205ENST00000433271 ITPK1Q13572 414 aa33.71■■■□□ 2.99
TMEM248-205ENST00000433271 DZIP1LQ8IYY4 767 aaKnown RBP33.71■■■□□ 2.99
TMEM248-205ENST00000433271 NBPF26B4DH59 902 aa33.71■■■□□ 2.99
TMEM248-205ENST00000433271 NBPF14Q5TI25 921 aa33.71■■■□□ 2.99
TMEM248-205ENST00000433271 NBPF10Q6P3W6 841 aaKnown RBP33.71■■■□□ 2.99
TMEM248-205ENST00000433271 NBPF15Q8N660 670 aa33.71■■■□□ 2.99
TMEM248-205ENST00000433271 MYL6BP14649 208 aa33.7■■■□□ 2.99
TMEM248-205ENST00000433271 LRP10Q7Z4F1 713 aa33.7■■■□□ 2.99
TMEM248-205ENST00000433271 TNNQ9UQP3 1299 aa33.7■■■□□ 2.99
TMEM248-205ENST00000433271 FKBP8Q14318 412 aa33.69■■■□□ 2.98
TMEM248-205ENST00000433271 FTSJ3Q8IY81 847 aaKnown RBP33.69■■■□□ 2.98
TMEM248-205ENST00000433271 CLUAP1Q96AJ1 413 aa33.69■■■□□ 2.98
TMEM248-205ENST00000433271 LY75O60449 1722 aa33.69■■■□□ 2.98
TMEM248-205ENST00000433271 FKBP5Q13451 457 aaPredicted RBP33.68■■■□□ 2.98
TMEM248-205ENST00000433271 PANK1Q8TE04 598 aa33.68■■■□□ 2.98
TMEM248-205ENST00000433271 RLBP1P12271 317 aa33.68■■■□□ 2.98
TMEM248-205ENST00000433271 PIP4K2AP48426 406 aaPredicted RBP33.68■■■□□ 2.98
TMEM248-205ENST00000433271 CCNL1Q9UK58 526 aaPredicted RBP33.68■■■□□ 2.98
TMEM248-205ENST00000433271 ABCC4O15439 1325 aa33.64■■■□□ 2.98
TMEM248-205ENST00000433271 PLSCR1O15162 318 aa33.63■■■□□ 2.97
TMEM248-205ENST00000433271 APBA3O96018 575 aa33.63■■■□□ 2.97
TMEM248-205ENST00000433271 CRKLP46109 303 aaKnown RBP33.63■■■□□ 2.97
TMEM248-205ENST00000433271 COPS6Q7L5N1 327 aa33.63■■■□□ 2.97
TMEM248-205ENST00000433271 CCDC87Q9NVE4 849 aa33.63■■■□□ 2.97
TMEM248-205ENST00000433271 GTF3C3Q9Y5Q9 886 aa33.63■■■□□ 2.97
TMEM248-205ENST00000433271 KCNQ4P56696 695 aa33.62■■■□□ 2.97
TMEM248-205ENST00000433271 SLC27A3Q5K4L6 730 aa33.62■■■□□ 2.97
TMEM248-205ENST00000433271 INTS5Q6P9B9 1019 aaKnown RBP33.62■■■□□ 2.97
TMEM248-205ENST00000433271 LINC00116Q8NCU8 138 aa33.62■■■□□ 2.97
TMEM248-205ENST00000433271 XAGE3Q8WTP9 111 aa33.62■■■□□ 2.97
TMEM248-205ENST00000433271 DDX58O95786 925 aaKnown RBP33.61■■■□□ 2.97
TMEM248-205ENST00000433271 COL5A3P25940 1745 aaPredicted RBP33.61■■■□□ 2.97
TMEM248-205ENST00000433271 AIMP1Q12904 312 aaKnown RBP33.61■■■□□ 2.97
TMEM248-205ENST00000433271 CRBNQ96SW2 442 aa33.61■■■□□ 2.97
TMEM248-205ENST00000433271 ZBTB1Q9Y2K1 713 aa33.61■■■□□ 2.97
TMEM248-205ENST00000433271 COG6Q9Y2V7 657 aa33.6■■■□□ 2.97
TMEM248-205ENST00000433271 PI4KAP2A4QPH2 592 aa33.59■■■□□ 2.97
TMEM248-205ENST00000433271 F6X3S4 739 aa33.59■■■□□ 2.97
TMEM248-205ENST00000433271 ERICH6BQ5W0A0 696 aa33.59■■■□□ 2.97
TMEM248-205ENST00000433271 TMEM57Q8N5G2 664 aa33.59■■■□□ 2.97
TMEM248-205ENST00000433271 PI4KAP1Q8N8J0 262 aa33.59■■■□□ 2.97
TMEM248-205ENST00000433271 CNTNAP4Q9C0A0 1308 aa33.58■■■□□ 2.97
TMEM248-205ENST00000433271 IL6STP40189 918 aaPredicted RBP33.58■■■□□ 2.97
TMEM248-205ENST00000433271 KSR2Q6VAB6 950 aa33.58■■■□□ 2.97
TMEM248-205ENST00000433271 MVPQ14764 893 aaKnown RBP33.57■■■□□ 2.97
TMEM248-205ENST00000433271 RC3H1Q5TC82 1133 aaKnown RBP33.57■■■□□ 2.97
TMEM248-205ENST00000433271 TNS1Q9HBL0 1735 aaKnown RBP33.57■■■□□ 2.96
TMEM248-205ENST00000433271 LRRC4BQ9NT99 713 aa33.57■■■□□ 2.96
TMEM248-205ENST00000433271 RREB1Q92766 1687 aa33.57■■■□□ 2.96
TMEM248-205ENST00000433271 ADCY9O60503 1353 aa33.56■■■□□ 2.96
TMEM248-205ENST00000433271 HMGB2P26583 209 aaKnown RBP33.56■■■□□ 2.96
TMEM248-205ENST00000433271 INTS3Q68E01 1043 aaKnown RBP33.56■■■□□ 2.96
TMEM248-205ENST00000433271 ANKRD13DQ6ZTN6 518 aa33.56■■■□□ 2.96
TMEM248-205ENST00000433271 EXOC6Q8TAG9 804 aa33.56■■■□□ 2.96
TMEM248-205ENST00000433271 MYH14Q7Z406 1995 aaKnown RBP33.55■■■□□ 2.96
TMEM248-205ENST00000433271 TXNRD1Q16881 649 aa33.55■■■□□ 2.96
TMEM248-205ENST00000433271 DNAAF4Q8WXU2 420 aa33.55■■■□□ 2.96
TMEM248-205ENST00000433271 SLC4A10Q6U841 1118 aa33.54■■■□□ 2.96
TMEM248-205ENST00000433271 ITPRIPQ8IWB1 547 aa33.54■■■□□ 2.96
TMEM248-205ENST00000433271 PROM2Q8N271 834 aa33.54■■■□□ 2.96
TMEM248-205ENST00000433271 EIF5P55010 431 aaKnown RBP33.53■■■□□ 2.96
TMEM248-205ENST00000433271 MAP3K2Q9Y2U5 619 aa33.53■■■□□ 2.96
TMEM248-205ENST00000433271 ZNF330Q9Y3S2 320 aaPredicted RBP33.53■■■□□ 2.96
TMEM248-205ENST00000433271 CCT4P50991 539 aaKnown RBP33.53■■■□□ 2.96
TMEM248-205ENST00000433271 TTLL7Q6ZT98 887 aa33.53■■■□□ 2.96
TMEM248-205ENST00000433271 RIC3Q7Z5B4 369 aa33.53■■■□□ 2.96
TMEM248-205ENST00000433271 PLBD2Q8NHP8 589 aa33.53■■■□□ 2.96
TMEM248-205ENST00000433271 TAF1LQ8IZX4 1826 aa33.53■■■□□ 2.96
TMEM248-205ENST00000433271 NPM2Q86SE8 214 aaKnown RBP33.52■■■□□ 2.96
TMEM248-205ENST00000433271 PXDNLA1KZ92 1463 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms