RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 BEGAINQ9BUH8 593 aa21.97■■□□□ 1.11
NUP50-209ENST00000432340 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
NUP50-209ENST00000432340 ZNF831Q5JPB2 1677 aa21.97■■□□□ 1.11
NUP50-209ENST00000432340 HSPA8P11142 646 aaKnown RBP21.96■■□□□ 1.11
NUP50-209ENST00000432340 C2CD5Q86YS7 1000 aa21.96■■□□□ 1.11
NUP50-209ENST00000432340 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
NUP50-209ENST00000432340 PASKQ96RG2 1323 aa21.96■■□□□ 1.11
NUP50-209ENST00000432340 PTCD1O75127 700 aaKnown RBP21.94■■□□□ 1.1
NUP50-209ENST00000432340 TESK2Q96S53 571 aa21.94■■□□□ 1.1
NUP50-209ENST00000432340 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
NUP50-209ENST00000432340 SBF1O95248 1867 aa21.92■■□□□ 1.1
NUP50-209ENST00000432340 DEFB115Q30KQ5 88 aa21.92■■□□□ 1.1
NUP50-209ENST00000432340 CDCA8Q53HL2 280 aa21.92■■□□□ 1.1
NUP50-209ENST00000432340 USPL1Q5W0Q7 1092 aa21.92■■□□□ 1.1
NUP50-209ENST00000432340 TAOK3Q9H2K8 898 aa21.92■■□□□ 1.1
NUP50-209ENST00000432340 LTBP3Q9NS15 1303 aa21.91■■□□□ 1.1
NUP50-209ENST00000432340 RASSF10A6NK89 507 aa21.91■■□□□ 1.1
NUP50-209ENST00000432340 SERPINB2P05120 415 aa21.91■■□□□ 1.1
NUP50-209ENST00000432340 NFIXQ14938 502 aa21.91■■□□□ 1.1
NUP50-209ENST00000432340 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
NUP50-209ENST00000432340 SOGA3Q5TF21 947 aa21.91■■□□□ 1.1
NUP50-209ENST00000432340 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
NUP50-209ENST00000432340 DDNO94850 711 aaPredicted RBP21.89■■□□□ 1.09
NUP50-209ENST00000432340 NARFQ9UHQ1 456 aa21.89■■□□□ 1.09
NUP50-209ENST00000432340 POTEIP0CG38 1075 aa21.88■■□□□ 1.09
NUP50-209ENST00000432340 POTEJP0CG39 1038 aa21.88■■□□□ 1.09
NUP50-209ENST00000432340 PDE6BP35913 854 aa21.88■■□□□ 1.09
NUP50-209ENST00000432340 MTHFSP49914 203 aa21.88■■□□□ 1.09
NUP50-209ENST00000432340 L3MBTL3Q96JM7 780 aaPredicted RBP21.88■■□□□ 1.09
NUP50-209ENST00000432340 C1orf141Q5JVX7 400 aa21.87■■□□□ 1.09
NUP50-209ENST00000432340 INTS5Q6P9B9 1019 aaKnown RBP21.87■■□□□ 1.09
NUP50-209ENST00000432340 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.09
NUP50-209ENST00000432340 TAF1DQ9H5J8 278 aaPredicted RBP21.87■■□□□ 1.09
NUP50-209ENST00000432340 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
NUP50-209ENST00000432340 C21orf2O43822 256 aa21.86■■□□□ 1.09
NUP50-209ENST00000432340 ECE1P42892 770 aa21.86■■□□□ 1.09
NUP50-209ENST00000432340 ZNF530Q6P9A1 599 aaPredicted RBP21.86■■□□□ 1.09
NUP50-209ENST00000432340 PNMA8AQ86V59 439 aaPredicted RBP21.86■■□□□ 1.09
NUP50-209ENST00000432340 CLEC11AQ9Y240 323 aa21.86■■□□□ 1.09
NUP50-209ENST00000432340 SOS1Q07889 1333 aaPredicted RBP21.85■■□□□ 1.09
NUP50-209ENST00000432340 ITGBL1O95965 494 aaPredicted RBP21.85■■□□□ 1.09
NUP50-209ENST00000432340 CFAP44Q96MT7 982 aa21.85■■□□□ 1.09
NUP50-209ENST00000432340 ABT1Q9ULW3 272 aaKnown RBP21.85■■□□□ 1.09
NUP50-209ENST00000432340 COL5A3P25940 1745 aaPredicted RBP21.85■■□□□ 1.09
NUP50-209ENST00000432340 TIAM2Q8IVF5 1701 aa21.84■■□□□ 1.09
NUP50-209ENST00000432340 EAPPQ56P03 285 aaPredicted RBP21.84■■□□□ 1.09
NUP50-209ENST00000432340 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.09
NUP50-209ENST00000432340 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
NUP50-209ENST00000432340 BRIP1Q9BX63 1249 aa21.83■■□□□ 1.09
NUP50-209ENST00000432340 HACL1Q9UJ83 578 aa21.82■■□□□ 1.08
NUP50-209ENST00000432340 COL15A1P39059 1388 aa21.8■■□□□ 1.08
NUP50-209ENST00000432340 CA12O43570 354 aa21.8■■□□□ 1.08
NUP50-209ENST00000432340 EIF4A2Q14240 407 aaKnown RBP21.8■■□□□ 1.08
NUP50-209ENST00000432340 CNTROBQ8N137 903 aa21.8■■□□□ 1.08
NUP50-209ENST00000432340 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
NUP50-209ENST00000432340 ZNF219Q9P2Y4 722 aaPredicted RBP21.79■■□□□ 1.08
NUP50-209ENST00000432340 A0A087WZG4 1122 aa21.78■■□□□ 1.08
NUP50-209ENST00000432340 PAXIP1Q6ZW49 1069 aaPredicted RBP21.78■■□□□ 1.08
NUP50-209ENST00000432340 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
NUP50-209ENST00000432340 NPHP1O15259 732 aa21.77■■□□□ 1.08
NUP50-209ENST00000432340 EPHX2P34913 555 aa21.77■■□□□ 1.08
NUP50-209ENST00000432340 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
NUP50-209ENST00000432340 STYK1Q6J9G0 422 aa21.76■■□□□ 1.07
NUP50-209ENST00000432340 GPR101Q96P66 508 aaPredicted RBP21.76■■□□□ 1.07
NUP50-209ENST00000432340 BICDL1Q6ZP65 573 aa21.75■■□□□ 1.07
NUP50-209ENST00000432340 CAPNS2Q96L46 248 aa21.75■■□□□ 1.07
NUP50-209ENST00000432340 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
NUP50-209ENST00000432340 MAP2K2P36507 400 aa21.74■■□□□ 1.07
NUP50-209ENST00000432340 BCL2L12Q9HB09 334 aa21.74■■□□□ 1.07
NUP50-209ENST00000432340 CARMIL3Q8ND23 1372 aa21.73■■□□□ 1.07
NUP50-209ENST00000432340 CCDC93Q567U6 631 aa21.72■■□□□ 1.07
NUP50-209ENST00000432340 MAP1SQ66K74 1059 aaPredicted RBP21.72■■□□□ 1.07
NUP50-209ENST00000432340 PRPF40BQ6NWY9 871 aaKnown RBP21.72■■□□□ 1.07
NUP50-209ENST00000432340 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
NUP50-209ENST00000432340 MASTLQ96GX5 879 aa21.72■■□□□ 1.07
NUP50-209ENST00000432340 CARD14Q9BXL6 1004 aa21.72■■□□□ 1.07
NUP50-209ENST00000432340 MCOLN1Q9GZU1 580 aa21.72■■□□□ 1.07
NUP50-209ENST00000432340 DDX21Q9NR30 783 aaKnown RBP eCLIP21.72■■□□□ 1.07
NUP50-209ENST00000432340 ZBTB1Q9Y2K1 713 aa21.72■■□□□ 1.07
NUP50-209ENST00000432340 STARD3NLO95772 234 aa21.71■■□□□ 1.07
NUP50-209ENST00000432340 ST5P78524 1137 aa21.71■■□□□ 1.07
NUP50-209ENST00000432340 NPM2Q86SE8 214 aaKnown RBP21.71■■□□□ 1.07
NUP50-209ENST00000432340 DLEC1Q9Y238 1755 aa21.71■■□□□ 1.07
NUP50-209ENST00000432340 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
NUP50-209ENST00000432340 CNBD1Q8NA66 436 aa21.7■■□□□ 1.06
NUP50-209ENST00000432340 KIF20BQ96Q89 1820 aa21.69■■□□□ 1.06
NUP50-209ENST00000432340 PRR5LQ6MZQ0 368 aa21.69■■□□□ 1.06
NUP50-209ENST00000432340 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
NUP50-209ENST00000432340 GRM1Q13255 1194 aa21.68■■□□□ 1.06
NUP50-209ENST00000432340 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
NUP50-209ENST00000432340 GPC2Q8N158 579 aa21.68■■□□□ 1.06
NUP50-209ENST00000432340 SCN4AP35499 1836 aa21.68■■□□□ 1.06
NUP50-209ENST00000432340 SRGNP10124 158 aa21.67■■□□□ 1.06
NUP50-209ENST00000432340 LMOD1P29536 600 aaPredicted RBP21.67■■□□□ 1.06
NUP50-209ENST00000432340 FKBP4Q02790 459 aaKnown RBP eCLIP21.67■■□□□ 1.06
NUP50-209ENST00000432340 SETDB2Q96T68 719 aa21.67■■□□□ 1.06
NUP50-209ENST00000432340 VIRMAQ69YN4 1812 aaKnown RBP21.66■■□□□ 1.06
NUP50-209ENST00000432340 ANKRD26Q9UPS8 1709 aa21.66■■□□□ 1.06
NUP50-209ENST00000432340 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
NUP50-209ENST00000432340 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms