RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GNASQ5JWF2 1037 aa5.07□□□□□ -1.6
CDC40-204ENST00000431461 TRIM11Q96F44 468 aa5.07□□□□□ -1.6
CDC40-204ENST00000431461 ZSCAN10Q96SZ4 725 aaPredicted RBP5.07□□□□□ -1.6
CDC40-204ENST00000431461 GPBP1L1Q9HC44 474 aaPredicted RBP5.07□□□□□ -1.6
CDC40-204ENST00000431461 RFC5P40937 340 aa5.06□□□□□ -1.6
CDC40-204ENST00000431461 NLRP8Q86W28 1048 aa5.06□□□□□ -1.6
CDC40-204ENST00000431461 CNKSR1Q969H4 720 aa5.06□□□□□ -1.6
CDC40-204ENST00000431461 TRIM34Q9BYJ4 488 aa5.06□□□□□ -1.6
CDC40-204ENST00000431461 PCDHGC4Q9Y5F7 938 aa5.06□□□□□ -1.6
CDC40-204ENST00000431461 ZBBXA8MT70 800 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 MSX1P28360 303 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 TMEM259Q4ZIN3 620 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 C1orf216Q8TAB5 229 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 XAGE2Q96GT9 111 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 OSBPL3Q9H4L5 887 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 HRH3Q9Y5N1 445 aa5.05□□□□□ -1.6
CDC40-204ENST00000431461 GOPCQ9HD26 462 aa5.04□□□□□ -1.6
CDC40-204ENST00000431461 PCDHB11Q9Y5F2 797 aa5.04□□□□□ -1.6
CDC40-204ENST00000431461 C4orf17Q53FE4 359 aa5.03□□□□□ -1.6
CDC40-204ENST00000431461 ESCO1Q5FWF5 840 aa5.03□□□□□ -1.6
CDC40-204ENST00000431461 TMEM214Q6NUQ4 689 aaKnown RBP5.03□□□□□ -1.6
CDC40-204ENST00000431461 FCHSD1Q86WN1 690 aa5.03□□□□□ -1.6
CDC40-204ENST00000431461 RHBDD1Q8TEB9 315 aa5.03□□□□□ -1.6
CDC40-204ENST00000431461 BCANQ96GW7 911 aa5.03□□□□□ -1.6
CDC40-204ENST00000431461 FHDC1Q9C0D6 1143 aaPredicted RBP5.03□□□□□ -1.6
CDC40-204ENST00000431461 PRDM6Q9NQX0 595 aa5.03□□□□□ -1.6
CDC40-204ENST00000431461 IL2RAP01589 272 aa5.02□□□□□ -1.61
CDC40-204ENST00000431461 FBXO45P0C2W1 286 aa5.02□□□□□ -1.61
CDC40-204ENST00000431461 ALAS2P22557 587 aa5.02□□□□□ -1.61
CDC40-204ENST00000431461 ZNF468Q5VIY5 522 aaPredicted RBP5.02□□□□□ -1.61
CDC40-204ENST00000431461 GJD4Q96KN9 370 aaPredicted RBP5.02□□□□□ -1.61
CDC40-204ENST00000431461 ZCCHC2Q9C0B9 1178 aaKnown RBP5.02□□□□□ -1.61
CDC40-204ENST00000431461 DNAAF2Q9NVR5 837 aaKnown RBP5.02□□□□□ -1.61
CDC40-204ENST00000431461 KLF15Q9UIH9 416 aa5.02□□□□□ -1.61
CDC40-204ENST00000431461 ELOA3CA0A087WX78 387 aaPredicted RBP5.01□□□□□ -1.61
CDC40-204ENST00000431461 ELOA3DA6NLF2 546 aaPredicted RBP5.01□□□□□ -1.61
CDC40-204ENST00000431461 ELOA3BQ3SY89 546 aa5.01□□□□□ -1.61
CDC40-204ENST00000431461 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
CDC40-204ENST00000431461 PPARGC1BQ86YN6 1023 aaKnown RBP5.01□□□□□ -1.61
CDC40-204ENST00000431461 ELOA3Q8NG57 546 aa5.01□□□□□ -1.61
CDC40-204ENST00000431461 C9orf172C9J069 976 aa5□□□□□ -1.61
CDC40-204ENST00000431461 ATXN7O15265 892 aaPredicted RBP5□□□□□ -1.61
CDC40-204ENST00000431461 STAU1O95793 577 aaKnown RBP5□□□□□ -1.61
CDC40-204ENST00000431461 ELNP15502 786 aa5□□□□□ -1.61
CDC40-204ENST00000431461 TNP2Q05952 138 aa5□□□□□ -1.61
CDC40-204ENST00000431461 TRIM28Q13263 835 aaKnown RBP5□□□□□ -1.61
CDC40-204ENST00000431461 PCMTD1Q96MG8 357 aaPredicted RBP5□□□□□ -1.61
CDC40-204ENST00000431461 ZNF330Q9Y3S2 320 aaPredicted RBP5□□□□□ -1.61
CDC40-204ENST00000431461 DCDC2BA2VCK2 349 aa4.99□□□□□ -1.61
CDC40-204ENST00000431461 MYCP01106 439 aaPredicted RBP4.99□□□□□ -1.61
CDC40-204ENST00000431461 MAPTP10636 758 aaKnown RBP4.99□□□□□ -1.61
CDC40-204ENST00000431461 NR1H3Q13133 447 aa4.99□□□□□ -1.61
CDC40-204ENST00000431461 TBC1D9Q6ZT07 1266 aa4.99□□□□□ -1.61
CDC40-204ENST00000431461 CD33P20138 364 aa4.98□□□□□ -1.61
CDC40-204ENST00000431461 MDFIQ99750 246 aa4.98□□□□□ -1.61
CDC40-204ENST00000431461 PRR12Q9ULL5 1215 aa4.98□□□□□ -1.61
CDC40-204ENST00000431461 ADARB2-AS1A8MUL3 147 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 FAM229AH3BQW9 127 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 SOCS7O14512 581 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 FAM157BP0CG42 384 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 PLA2G4AP47712 749 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 NRG1Q02297 640 aaPredicted RBP4.97□□□□□ -1.61
CDC40-204ENST00000431461 ADGRE1Q14246 886 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 SLC51AQ86UW1 340 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 CDCA7Q9BWT1 371 aaPredicted RBP4.97□□□□□ -1.61
CDC40-204ENST00000431461 RNF112Q9ULX5 631 aa4.97□□□□□ -1.61
CDC40-204ENST00000431461 KHNYNO15037 678 aaKnown RBP4.96□□□□□ -1.62
CDC40-204ENST00000431461 PCBP4P57723 403 aaKnown RBP4.96□□□□□ -1.62
CDC40-204ENST00000431461 SAMD5Q5TGI4 173 aa4.96□□□□□ -1.62
CDC40-204ENST00000431461 AIDAQ96BJ3 306 aa4.96□□□□□ -1.62
CDC40-204ENST00000431461 RNF114Q9Y508 228 aa4.96□□□□□ -1.62
CDC40-204ENST00000431461 SIN3BO75182 1162 aa4.95□□□□□ -1.62
CDC40-204ENST00000431461 IRAK1P51617 712 aa4.95□□□□□ -1.62
CDC40-204ENST00000431461 JAG1P78504 1218 aa4.95□□□□□ -1.62
CDC40-204ENST00000431461 COL9A3Q14050 684 aaPredicted RBP4.95□□□□□ -1.62
CDC40-204ENST00000431461 TXNRD3Q86VQ6 643 aa4.95□□□□□ -1.62
CDC40-204ENST00000431461 BANK1Q8NDB2 785 aa4.95□□□□□ -1.62
CDC40-204ENST00000431461 MARK1Q9P0L2 795 aa4.95□□□□□ -1.62
CDC40-204ENST00000431461 A0A1W2PNR3 127 aa4.94□□□□□ -1.62
CDC40-204ENST00000431461 ATP4AP20648 1035 aa4.94□□□□□ -1.62
CDC40-204ENST00000431461 TLR1Q15399 786 aa4.94□□□□□ -1.62
CDC40-204ENST00000431461 LENG1Q96BZ8 264 aaPredicted RBP4.94□□□□□ -1.62
CDC40-204ENST00000431461 NIFKQ9BYG3 293 aaKnown RBP4.94□□□□□ -1.62
CDC40-204ENST00000431461 ZDHHC3Q9NYG2 299 aa4.94□□□□□ -1.62
CDC40-204ENST00000431461 CEP126Q9P2H0 1117 aa4.94□□□□□ -1.62
CDC40-204ENST00000431461 HCN2Q9UL51 889 aa4.94□□□□□ -1.62
CDC40-204ENST00000431461 M0R082 166 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 EFSO43281 561 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 GPR37L1O60883 481 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 MBTPS1Q14703 1052 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 NBPF1Q3BBV0 1214 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 ZNF417Q8TAU3 575 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 TNFRSF25Q93038 417 aa4.93□□□□□ -1.62
CDC40-204ENST00000431461 CCDC85AQ96PX6 553 aaPredicted RBP4.93□□□□□ -1.62
CDC40-204ENST00000431461 ZNF587Q96SQ5 575 aaPredicted RBP4.93□□□□□ -1.62
CDC40-204ENST00000431461 NID1P14543 1247 aa4.92□□□□□ -1.62
CDC40-204ENST00000431461 TATP17735 454 aaPredicted RBP4.92□□□□□ -1.62
CDC40-204ENST00000431461 USP4Q13107 963 aa4.92□□□□□ -1.62
CDC40-204ENST00000431461 GRIK4Q16099 956 aa4.92□□□□□ -1.62
CDC40-204ENST00000431461 ARSJQ5FYB0 599 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms