RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HSPA2P54652 639 aa17.24■□□□□ 0.35
HOXC4-202ENST00000430889 PHKG2P15735 406 aa17.23■□□□□ 0.35
HOXC4-202ENST00000430889 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
HOXC4-202ENST00000430889 AOX1Q06278 1338 aa17.23■□□□□ 0.35
HOXC4-202ENST00000430889 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
HOXC4-202ENST00000430889 ANXA1P04083 346 aa17.23■□□□□ 0.35
HOXC4-202ENST00000430889 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
HOXC4-202ENST00000430889 PRAMEF22A3QJZ6 481 aa17.22■□□□□ 0.35
HOXC4-202ENST00000430889 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
HOXC4-202ENST00000430889 SLC52A2Q9HAB3 445 aa17.22■□□□□ 0.35
HOXC4-202ENST00000430889 NLRP2Q9NX02 1062 aa17.22■□□□□ 0.35
HOXC4-202ENST00000430889 CHMP5Q9NZZ3 219 aa17.22■□□□□ 0.35
HOXC4-202ENST00000430889 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
HOXC4-202ENST00000430889 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 ALDH1L1O75891 902 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
HOXC4-202ENST00000430889 MTX1Q13505 466 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 PDIA6Q15084 440 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
HOXC4-202ENST00000430889 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
HOXC4-202ENST00000430889 MX1P20591 662 aa17.2■□□□□ 0.34
HOXC4-202ENST00000430889 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
HOXC4-202ENST00000430889 ZNF790Q6PG37 636 aa17.2■□□□□ 0.34
HOXC4-202ENST00000430889 KSR2Q6VAB6 950 aa17.2■□□□□ 0.34
HOXC4-202ENST00000430889 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
HOXC4-202ENST00000430889 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
HOXC4-202ENST00000430889 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
HOXC4-202ENST00000430889 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
HOXC4-202ENST00000430889 GSE1Q14687 1217 aa17.19■□□□□ 0.34
HOXC4-202ENST00000430889 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
HOXC4-202ENST00000430889 UTYO14607 1347 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 SOS2Q07890 1332 aaPredicted RBP17.18■□□□□ 0.34
HOXC4-202ENST00000430889 CYP27B1O15528 508 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 RABEP1Q15276 862 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 CHRNA2Q15822 529 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 IFNL2Q8IZJ0 200 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
HOXC4-202ENST00000430889 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
HOXC4-202ENST00000430889 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
HOXC4-202ENST00000430889 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
HOXC4-202ENST00000430889 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
HOXC4-202ENST00000430889 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
HOXC4-202ENST00000430889 PAPPAQ13219 1627 aa17.17■□□□□ 0.34
HOXC4-202ENST00000430889 ERC2O15083 957 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 REC8O95072 547 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
HOXC4-202ENST00000430889 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
HOXC4-202ENST00000430889 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
HOXC4-202ENST00000430889 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
HOXC4-202ENST00000430889 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
HOXC4-202ENST00000430889 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
HOXC4-202ENST00000430889 SURF6O75683 361 aaKnown RBP17.14■□□□□ 0.33
HOXC4-202ENST00000430889 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
HOXC4-202ENST00000430889 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
HOXC4-202ENST00000430889 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
HOXC4-202ENST00000430889 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
HOXC4-202ENST00000430889 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
HOXC4-202ENST00000430889 CSB-PGBD3P0DP91 1061 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 CHMLP26374 656 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 MCM4P33991 863 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 ZNF496Q96IT1 587 aaPredicted RBP17.13■□□□□ 0.33
HOXC4-202ENST00000430889 WDR17Q8IZU2 1322 aa17.13■□□□□ 0.33
HOXC4-202ENST00000430889 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
HOXC4-202ENST00000430889 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
HOXC4-202ENST00000430889 HSP90AB4PQ58FF6 505 aa17.12■□□□□ 0.33
HOXC4-202ENST00000430889 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
HOXC4-202ENST00000430889 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
HOXC4-202ENST00000430889 DDX58O95786 925 aaKnown RBP17.11■□□□□ 0.33
HOXC4-202ENST00000430889 IGKV5-2P06315 115 aa17.11■□□□□ 0.33
HOXC4-202ENST00000430889 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
HOXC4-202ENST00000430889 GRM8O00222 908 aa17.1■□□□□ 0.33
HOXC4-202ENST00000430889 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
HOXC4-202ENST00000430889 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
HOXC4-202ENST00000430889 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
HOXC4-202ENST00000430889 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
HOXC4-202ENST00000430889 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
HOXC4-202ENST00000430889 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
HOXC4-202ENST00000430889 SUCLG2Q96I99 432 aa17.1■□□□□ 0.33
HOXC4-202ENST00000430889 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
HOXC4-202ENST00000430889 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
HOXC4-202ENST00000430889 COL15A1P39059 1388 aa17.09■□□□□ 0.33
HOXC4-202ENST00000430889 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
HOXC4-202ENST00000430889 LARP1Q6PKG0 1096 aaKnown RBP17.08■□□□□ 0.32
HOXC4-202ENST00000430889 TOGARAM1Q9Y4F4 1720 aa17.08■□□□□ 0.32
HOXC4-202ENST00000430889 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
HOXC4-202ENST00000430889 TTC41PQ6P2S7 1318 aa17.07■□□□□ 0.32
HOXC4-202ENST00000430889 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
HOXC4-202ENST00000430889 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
HOXC4-202ENST00000430889 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
HOXC4-202ENST00000430889 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms