RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 ZNF827Q17R98 1081 aa23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 TRMT2AQ8IZ69 625 aaKnown RBP23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 ANO8Q9HCE9 1232 aaPredicted RBP23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 CCDC87Q9NVE4 849 aa23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 TAF1LQ8IZX4 1826 aa23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 C4BP0C0L5 1744 aa23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.34
CDC42EP1-203ENST00000430687 DUSP27Q5VZP5 1158 aa23.44■■□□□ 1.34
CDC42EP1-203ENST00000430687 INTS5Q6P9B9 1019 aaKnown RBP23.44■■□□□ 1.34
CDC42EP1-203ENST00000430687 RPS6KA4O75676 772 aa23.43■■□□□ 1.34
CDC42EP1-203ENST00000430687 KRT24Q2M2I5 525 aa23.43■■□□□ 1.34
CDC42EP1-203ENST00000430687 C8orf58Q8NAV2 365 aa23.43■■□□□ 1.34
CDC42EP1-203ENST00000430687 FLAD1Q8NFF5 587 aa23.43■■□□□ 1.34
CDC42EP1-203ENST00000430687 CDCA7LQ96GN5 454 aa23.43■■□□□ 1.34
CDC42EP1-203ENST00000430687 TFCP2L1Q9NZI6 479 aa23.43■■□□□ 1.34
CDC42EP1-203ENST00000430687 ERBB4Q15303 1308 aa23.42■■□□□ 1.34
CDC42EP1-203ENST00000430687 RTCBQ9Y3I0 505 aaKnown RBP23.42■■□□□ 1.34
CDC42EP1-203ENST00000430687 GNPATO15228 680 aa23.41■■□□□ 1.34
CDC42EP1-203ENST00000430687 SSFA2P28290 1259 aa23.41■■□□□ 1.34
CDC42EP1-203ENST00000430687 ADRA2BP18089 450 aa23.4■■□□□ 1.34
CDC42EP1-203ENST00000430687 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
CDC42EP1-203ENST00000430687 TWISTNBQ3B726 338 aaPredicted RBP23.4■■□□□ 1.34
CDC42EP1-203ENST00000430687 A1BGP04217 495 aa23.39■■□□□ 1.33
CDC42EP1-203ENST00000430687 IL6STP40189 918 aaPredicted RBP23.39■■□□□ 1.33
CDC42EP1-203ENST00000430687 ZBTB1Q9Y2K1 713 aa23.39■■□□□ 1.33
CDC42EP1-203ENST00000430687 LAMB4A4D0S4 1761 aa23.38■■□□□ 1.33
CDC42EP1-203ENST00000430687 ELL2O00472 640 aaPredicted RBP23.38■■□□□ 1.33
CDC42EP1-203ENST00000430687 EIF2S2P20042 333 aaKnown RBP23.38■■□□□ 1.33
CDC42EP1-203ENST00000430687 HDGFL1Q5TGJ6 251 aa23.38■■□□□ 1.33
CDC42EP1-203ENST00000430687 TSPYL6Q8N831 410 aa23.38■■□□□ 1.33
CDC42EP1-203ENST00000430687 CANXP27824 592 aaKnown RBP23.37■■□□□ 1.33
CDC42EP1-203ENST00000430687 EIF5P55010 431 aaKnown RBP23.36■■□□□ 1.33
CDC42EP1-203ENST00000430687 R3HDM1Q15032 1099 aaKnown RBP23.36■■□□□ 1.33
CDC42EP1-203ENST00000430687 TRAPPC3LQ5T215 181 aa23.36■■□□□ 1.33
CDC42EP1-203ENST00000430687 PNPLA7Q6ZV29 1317 aa23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 VAMP4O75379 141 aa23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 CCDC30Q5VVM6 783 aa23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
CDC42EP1-203ENST00000430687 A0A087WZG4 1122 aa23.34■■□□□ 1.33
CDC42EP1-203ENST00000430687 CT47B1P0C2W7 299 aaPredicted RBP23.34■■□□□ 1.33
CDC42EP1-203ENST00000430687 DDX21Q9NR30 783 aaKnown RBP eCLIP23.34■■□□□ 1.33
CDC42EP1-203ENST00000430687 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.33
CDC42EP1-203ENST00000430687 PDIA6Q15084 440 aa23.33■■□□□ 1.33
CDC42EP1-203ENST00000430687 AMIGO3Q86WK7 504 aa23.33■■□□□ 1.33
CDC42EP1-203ENST00000430687 ARHGEF1Q92888 912 aaKnown RBP23.33■■□□□ 1.33
CDC42EP1-203ENST00000430687 ZNF428Q96B54 188 aa23.33■■□□□ 1.33
CDC42EP1-203ENST00000430687 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
CDC42EP1-203ENST00000430687 PHF14O94880 888 aa23.32■■□□□ 1.32
CDC42EP1-203ENST00000430687 COL23A1Q86Y22 540 aaPredicted RBP23.32■■□□□ 1.32
CDC42EP1-203ENST00000430687 SLC16A10Q8TF71 515 aa23.32■■□□□ 1.32
CDC42EP1-203ENST00000430687 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
CDC42EP1-203ENST00000430687 UBR3Q6ZT12 1888 aa23.32■■□□□ 1.32
CDC42EP1-203ENST00000430687 COL15A1P39059 1388 aa23.31■■□□□ 1.32
CDC42EP1-203ENST00000430687 RFC4P35249 363 aa23.31■■□□□ 1.32
CDC42EP1-203ENST00000430687 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
CDC42EP1-203ENST00000430687 STK31Q9BXU1 1019 aa23.3■■□□□ 1.32
CDC42EP1-203ENST00000430687 HYPKQ9NX55 129 aa23.3■■□□□ 1.32
CDC42EP1-203ENST00000430687 CHPF2Q9P2E5 772 aa23.3■■□□□ 1.32
CDC42EP1-203ENST00000430687 PSDA5PKW4 1024 aaPredicted RBP23.29■■□□□ 1.32
CDC42EP1-203ENST00000430687 MYL6BP14649 208 aa23.29■■□□□ 1.32
CDC42EP1-203ENST00000430687 PIP4K2AP48426 406 aaPredicted RBP23.29■■□□□ 1.32
CDC42EP1-203ENST00000430687 LRP10Q7Z4F1 713 aa23.29■■□□□ 1.32
CDC42EP1-203ENST00000430687 MSH5O43196 834 aa23.28■■□□□ 1.32
CDC42EP1-203ENST00000430687 SMIM5Q71RC9 77 aa23.28■■□□□ 1.32
CDC42EP1-203ENST00000430687 NARFQ9UHQ1 456 aa23.28■■□□□ 1.32
CDC42EP1-203ENST00000430687 RGL2O15211 777 aa23.27■■□□□ 1.32
CDC42EP1-203ENST00000430687 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
CDC42EP1-203ENST00000430687 ZNF330Q9Y3S2 320 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP1-203ENST00000430687 USP42Q9H9J4 1324 aaKnown RBP23.27■■□□□ 1.32
CDC42EP1-203ENST00000430687 TUBGCP6Q96RT7 1819 aa23.26■■□□□ 1.31
CDC42EP1-203ENST00000430687 ZPR1O75312 459 aa23.26■■□□□ 1.31
CDC42EP1-203ENST00000430687 DZIP3Q86Y13 1208 aaKnown RBP23.26■■□□□ 1.31
CDC42EP1-203ENST00000430687 SLC4A2P04920 1241 aa23.24■■□□□ 1.31
CDC42EP1-203ENST00000430687 ALDH1L2Q3SY69 923 aa23.24■■□□□ 1.31
CDC42EP1-203ENST00000430687 PDGFDQ9GZP0 370 aaPredicted RBP23.24■■□□□ 1.31
CDC42EP1-203ENST00000430687 TBC1D2BQ9UPU7 963 aa23.24■■□□□ 1.31
CDC42EP1-203ENST00000430687 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 ERVV-1B6SEH8 477 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 ANXA1P04083 346 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 KIF6Q6ZMV9 814 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 COPS6Q7L5N1 327 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 NLGN1Q8N2Q7 840 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 MTFR1LQ9H019 292 aa23.23■■□□□ 1.31
CDC42EP1-203ENST00000430687 CAMTA2O94983 1202 aa23.22■■□□□ 1.31
CDC42EP1-203ENST00000430687 GYS1P13807 737 aa23.22■■□□□ 1.31
CDC42EP1-203ENST00000430687 USPL1Q5W0Q7 1092 aa23.22■■□□□ 1.31
CDC42EP1-203ENST00000430687 CLEC4GQ6UXB4 293 aa23.22■■□□□ 1.31
CDC42EP1-203ENST00000430687 XAGE3Q8WTP9 111 aa23.22■■□□□ 1.31
CDC42EP1-203ENST00000430687 ARXQ96QS3 562 aa23.22■■□□□ 1.31
CDC42EP1-203ENST00000430687 SRP68Q9UHB9 627 aaKnown RBP23.21■■□□□ 1.31
CDC42EP1-203ENST00000430687 MAP3K15Q6ZN16 1313 aa23.2■■□□□ 1.3
CDC42EP1-203ENST00000430687 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
CDC42EP1-203ENST00000430687 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
CDC42EP1-203ENST00000430687 PHAXQ9H814 394 aaKnown RBP23.2■■□□□ 1.3
CDC42EP1-203ENST00000430687 ZNF652Q9Y2D9 606 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms