RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 PXDNLA1KZ92 1463 aa16.69■□□□□ 0.26
SMPD4-204ENST00000430682 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
SMPD4-204ENST00000430682 TTC5Q8N0Z6 440 aa16.69■□□□□ 0.26
SMPD4-204ENST00000430682 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
SMPD4-204ENST00000430682 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
SMPD4-204ENST00000430682 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
SMPD4-204ENST00000430682 COL15A1P39059 1388 aa16.68■□□□□ 0.26
SMPD4-204ENST00000430682 BTBD11A6QL63 1104 aa16.68■□□□□ 0.26
SMPD4-204ENST00000430682 RALBP1Q15311 655 aa16.68■□□□□ 0.26
SMPD4-204ENST00000430682 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
SMPD4-204ENST00000430682 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
SMPD4-204ENST00000430682 TM4SF1P30408 202 aa16.67■□□□□ 0.26
SMPD4-204ENST00000430682 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
SMPD4-204ENST00000430682 EIF5P55010 431 aaKnown RBP16.66■□□□□ 0.26
SMPD4-204ENST00000430682 MIS18AQ9NYP9 233 aa16.66■□□□□ 0.26
SMPD4-204ENST00000430682 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
SMPD4-204ENST00000430682 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
SMPD4-204ENST00000430682 A0A0G2JLW4 131 aa16.65■□□□□ 0.26
SMPD4-204ENST00000430682 A1BGP04217 495 aa16.65■□□□□ 0.26
SMPD4-204ENST00000430682 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-204ENST00000430682 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
SMPD4-204ENST00000430682 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
SMPD4-204ENST00000430682 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
SMPD4-204ENST00000430682 POLRMTO00411 1230 aaKnown RBP16.64■□□□□ 0.25
SMPD4-204ENST00000430682 HTATSF1O43719 755 aaKnown RBP16.64■□□□□ 0.25
SMPD4-204ENST00000430682 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-204ENST00000430682 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
SMPD4-204ENST00000430682 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.25
SMPD4-204ENST00000430682 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
SMPD4-204ENST00000430682 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 ZPR1O75312 459 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 STARD3NLO95772 234 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 DPEP1P16444 411 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 KCNA3P22001 575 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 NFIXQ14938 502 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 LAMB4A4D0S4 1761 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
SMPD4-204ENST00000430682 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
SMPD4-204ENST00000430682 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
SMPD4-204ENST00000430682 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
SMPD4-204ENST00000430682 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-204ENST00000430682 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
SMPD4-204ENST00000430682 TGFB2P61812 414 aa16.6■□□□□ 0.25
SMPD4-204ENST00000430682 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-204ENST00000430682 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
SMPD4-204ENST00000430682 NBPF26B4DH59 902 aa16.59■□□□□ 0.25
SMPD4-204ENST00000430682 CHRNA5P30532 468 aa16.59■□□□□ 0.25
SMPD4-204ENST00000430682 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-204ENST00000430682 NBPF10Q6P3W6 841 aaKnown RBP16.59■□□□□ 0.25
SMPD4-204ENST00000430682 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
SMPD4-204ENST00000430682 NBPF15Q8N660 670 aa16.59■□□□□ 0.25
SMPD4-204ENST00000430682 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-204ENST00000430682 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
SMPD4-204ENST00000430682 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
SMPD4-204ENST00000430682 CARMIL3Q8ND23 1372 aa16.58■□□□□ 0.24
SMPD4-204ENST00000430682 SBF1O95248 1867 aa16.57■□□□□ 0.24
SMPD4-204ENST00000430682 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
SMPD4-204ENST00000430682 CAMTA2O94983 1202 aa16.57■□□□□ 0.24
SMPD4-204ENST00000430682 SERPINB2P05120 415 aa16.57■□□□□ 0.24
SMPD4-204ENST00000430682 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
SMPD4-204ENST00000430682 RRP7AQ9Y3A4 280 aaKnown RBP16.57■□□□□ 0.24
SMPD4-204ENST00000430682 NUP98P52948 1817 aa16.56■□□□□ 0.24
SMPD4-204ENST00000430682 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-204ENST00000430682 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
SMPD4-204ENST00000430682 RIPK4P57078 832 aa16.56■□□□□ 0.24
SMPD4-204ENST00000430682 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
SMPD4-204ENST00000430682 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
SMPD4-204ENST00000430682 BCS1LQ9Y276 419 aa16.56■□□□□ 0.24
SMPD4-204ENST00000430682 CCDC88AQ3V6T2 1871 aa16.55■□□□□ 0.24
SMPD4-204ENST00000430682 A0A087WZG4 1122 aa16.55■□□□□ 0.24
SMPD4-204ENST00000430682 NEFMP07197 916 aa16.55■□□□□ 0.24
SMPD4-204ENST00000430682 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
SMPD4-204ENST00000430682 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
SMPD4-204ENST00000430682 ADCY9O60503 1353 aa16.54■□□□□ 0.24
SMPD4-204ENST00000430682 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-204ENST00000430682 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
SMPD4-204ENST00000430682 DZIP3Q86Y13 1208 aaKnown RBP16.53■□□□□ 0.24
SMPD4-204ENST00000430682 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
SMPD4-204ENST00000430682 ATP10DQ9P241 1426 aa16.53■□□□□ 0.24
SMPD4-204ENST00000430682 NEUROD2Q15784 382 aa16.52■□□□□ 0.24
SMPD4-204ENST00000430682 TRIM35Q9UPQ4 493 aa16.52■□□□□ 0.24
SMPD4-204ENST00000430682 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-204ENST00000430682 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
SMPD4-204ENST00000430682 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
SMPD4-204ENST00000430682 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
SMPD4-204ENST00000430682 CEP350Q5VT06 3117 aa16.5■□□□□ 0.23
SMPD4-204ENST00000430682 HLFQ16534 295 aa16.5■□□□□ 0.23
SMPD4-204ENST00000430682 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
SMPD4-204ENST00000430682 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
SMPD4-204ENST00000430682 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMPD4-204ENST00000430682 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
SMPD4-204ENST00000430682 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
SMPD4-204ENST00000430682 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
SMPD4-204ENST00000430682 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
SMPD4-204ENST00000430682 NGEFQ8N5V2 710 aa16.48■□□□□ 0.23
SMPD4-204ENST00000430682 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
SMPD4-204ENST00000430682 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
SMPD4-204ENST00000430682 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
SMPD4-204ENST00000430682 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 398.9 ms