RNA–Protein interactions for RNA: ENST00000430670.5

HDAC7-210, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-210ENST00000430670 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
HDAC7-210ENST00000430670 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
HDAC7-210ENST00000430670 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
HDAC7-210ENST00000430670 GYS1P13807 737 aa22.21■■□□□ 1.15
HDAC7-210ENST00000430670 MRS2Q9HD23 443 aa22.21■■□□□ 1.15
HDAC7-210ENST00000430670 ZBTB1Q9Y2K1 713 aa22.21■■□□□ 1.15
HDAC7-210ENST00000430670 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
HDAC7-210ENST00000430670 KCNQ3O43525 872 aa22.2■■□□□ 1.14
HDAC7-210ENST00000430670 MMP10P09238 476 aa22.2■■□□□ 1.14
HDAC7-210ENST00000430670 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
HDAC7-210ENST00000430670 TSPYL4Q9UJ04 414 aa22.2■■□□□ 1.14
HDAC7-210ENST00000430670 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
HDAC7-210ENST00000430670 COL5A3P25940 1745 aaPredicted RBP22.18■■□□□ 1.14
HDAC7-210ENST00000430670 COL15A1P39059 1388 aa22.18■■□□□ 1.14
HDAC7-210ENST00000430670 USP16Q9Y5T5 823 aa22.18■■□□□ 1.14
HDAC7-210ENST00000430670 TUBGCP6Q96RT7 1819 aa22.17■■□□□ 1.14
HDAC7-210ENST00000430670 EIF4A1P60842 406 aaKnown RBP22.17■■□□□ 1.14
HDAC7-210ENST00000430670 MIS18AQ9NYP9 233 aa22.17■■□□□ 1.14
HDAC7-210ENST00000430670 SRCAPQ6ZRS2 3230 aa22.16■■□□□ 1.14
HDAC7-210ENST00000430670 NCBP3Q53F19 620 aaKnown RBP22.16■■□□□ 1.14
HDAC7-210ENST00000430670 USPL1Q5W0Q7 1092 aa22.16■■□□□ 1.14
HDAC7-210ENST00000430670 RRP7AQ9Y3A4 280 aaKnown RBP22.16■■□□□ 1.14
HDAC7-210ENST00000430670 COL24A1Q17RW2 1714 aa22.16■■□□□ 1.14
HDAC7-210ENST00000430670 RGL2O15211 777 aa22.15■■□□□ 1.14
HDAC7-210ENST00000430670 GIGYF1O75420 1035 aaPredicted RBP22.15■■□□□ 1.14
HDAC7-210ENST00000430670 A1BGP04217 495 aa22.15■■□□□ 1.14
HDAC7-210ENST00000430670 TGFB2P61812 414 aa22.15■■□□□ 1.14
HDAC7-210ENST00000430670 GPR162Q16538 588 aa22.15■■□□□ 1.14
HDAC7-210ENST00000430670 THUMPD2Q9BTF0 503 aaKnown RBP22.15■■□□□ 1.14
HDAC7-210ENST00000430670 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
HDAC7-210ENST00000430670 SIPA1L3O60292 1781 aaPredicted RBP22.15■■□□□ 1.14
HDAC7-210ENST00000430670 UBR2Q8IWV8 1755 aa22.15■■□□□ 1.14
HDAC7-210ENST00000430670 TJP1Q07157 1748 aa22.14■■□□□ 1.14
HDAC7-210ENST00000430670 APAF1O14727 1248 aa22.14■■□□□ 1.13
HDAC7-210ENST00000430670 ZNF330Q9Y3S2 320 aaPredicted RBP22.14■■□□□ 1.13
HDAC7-210ENST00000430670 VIRMAQ69YN4 1812 aaKnown RBP22.14■■□□□ 1.13
HDAC7-210ENST00000430670 GRIN3BO60391 1043 aa22.13■■□□□ 1.13
HDAC7-210ENST00000430670 SRP68Q9UHB9 627 aaKnown RBP22.13■■□□□ 1.13
HDAC7-210ENST00000430670 TRIM35Q9UPQ4 493 aa22.13■■□□□ 1.13
HDAC7-210ENST00000430670 ZNF652Q9Y2D9 606 aa22.13■■□□□ 1.13
HDAC7-210ENST00000430670 ERBB4Q15303 1308 aa22.12■■□□□ 1.13
HDAC7-210ENST00000430670 CHL1O00533 1208 aa22.12■■□□□ 1.13
HDAC7-210ENST00000430670 TM4SF1P30408 202 aa22.12■■□□□ 1.13
HDAC7-210ENST00000430670 FKBP8Q14318 412 aa22.12■■□□□ 1.13
HDAC7-210ENST00000430670 CLEC4GQ6UXB4 293 aa22.12■■□□□ 1.13
HDAC7-210ENST00000430670 CFAP44Q96MT7 982 aa22.12■■□□□ 1.13
HDAC7-210ENST00000430670 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
HDAC7-210ENST00000430670 GNAI1P63096 354 aa22.1■■□□□ 1.13
HDAC7-210ENST00000430670 DZIP3Q86Y13 1208 aaKnown RBP22.1■■□□□ 1.13
HDAC7-210ENST00000430670 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
HDAC7-210ENST00000430670 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
HDAC7-210ENST00000430670 TBC1D2BQ9UPU7 963 aa22.09■■□□□ 1.13
HDAC7-210ENST00000430670 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.13
HDAC7-210ENST00000430670 HOXB7P09629 217 aa22.08■■□□□ 1.13
HDAC7-210ENST00000430670 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
HDAC7-210ENST00000430670 NLGN2Q8NFZ4 835 aa22.07■■□□□ 1.12
HDAC7-210ENST00000430670 SETDB2Q96T68 719 aa22.07■■□□□ 1.12
HDAC7-210ENST00000430670 IFT57Q9NWB7 429 aa22.07■■□□□ 1.12
HDAC7-210ENST00000430670 PDZRN3Q9UPQ7 1066 aa22.07■■□□□ 1.12
HDAC7-210ENST00000430670 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
HDAC7-210ENST00000430670 NFIXQ14938 502 aa22.06■■□□□ 1.12
HDAC7-210ENST00000430670 CCDC184Q52MB2 194 aa22.06■■□□□ 1.12
HDAC7-210ENST00000430670 POLRMTO00411 1230 aaKnown RBP22.05■■□□□ 1.12
HDAC7-210ENST00000430670 SERPINB2P05120 415 aa22.05■■□□□ 1.12
HDAC7-210ENST00000430670 KIF6Q6ZMV9 814 aa22.05■■□□□ 1.12
HDAC7-210ENST00000430670 DLG5Q8TDM6 1919 aa22.05■■□□□ 1.12
HDAC7-210ENST00000430670 ERVV-1B6SEH8 477 aa22.04■■□□□ 1.12
HDAC7-210ENST00000430670 NBPF26B4DH59 902 aa22.03■■□□□ 1.12
HDAC7-210ENST00000430670 NPHP1O15259 732 aa22.03■■□□□ 1.12
HDAC7-210ENST00000430670 CAMTA2O94983 1202 aa22.03■■□□□ 1.12
HDAC7-210ENST00000430670 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
HDAC7-210ENST00000430670 NBPF10Q6P3W6 841 aaKnown RBP22.03■■□□□ 1.12
HDAC7-210ENST00000430670 NBPF15Q8N660 670 aa22.03■■□□□ 1.12
HDAC7-210ENST00000430670 BCL2L12Q9HB09 334 aa22.03■■□□□ 1.12
HDAC7-210ENST00000430670 DDR1Q08345 913 aa22.02■■□□□ 1.12
HDAC7-210ENST00000430670 CARMIL3Q8ND23 1372 aa22.01■■□□□ 1.11
HDAC7-210ENST00000430670 BICDL1Q6ZP65 573 aa22.01■■□□□ 1.11
HDAC7-210ENST00000430670 ZNF853P0CG23 659 aa22■■□□□ 1.11
HDAC7-210ENST00000430670 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
HDAC7-210ENST00000430670 TPTE2Q6XPS3 522 aa22■■□□□ 1.11
HDAC7-210ENST00000430670 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
HDAC7-210ENST00000430670 PIM2Q9P1W9 311 aa22■■□□□ 1.11
HDAC7-210ENST00000430670 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 MYL6BP14649 208 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 YY1P25490 414 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 PDE6BP35913 854 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 IL16Q14005 1332 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
HDAC7-210ENST00000430670 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
HDAC7-210ENST00000430670 ST5P78524 1137 aa21.98■■□□□ 1.11
HDAC7-210ENST00000430670 WWC1Q8IX03 1113 aa21.98■■□□□ 1.11
HDAC7-210ENST00000430670 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
HDAC7-210ENST00000430670 DBF4Q9UBU7 674 aaPredicted RBP21.98■■□□□ 1.11
HDAC7-210ENST00000430670 A0A0G2JLW4 131 aa21.97■■□□□ 1.11
HDAC7-210ENST00000430670 H0YIN7 160 aa21.97■■□□□ 1.11
HDAC7-210ENST00000430670 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
HDAC7-210ENST00000430670 HDGFL1Q5TGJ6 251 aa21.97■■□□□ 1.11
HDAC7-210ENST00000430670 WDR63Q8IWG1 891 aa21.97■■□□□ 1.11
HDAC7-210ENST00000430670 BRIP1Q9BX63 1249 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms