RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 BAG6P46379 1132 aa11.48□□□□□ -0.57
COL6A4P2-201ENST00000430317 SIK1P57059 783 aa11.48□□□□□ -0.57
COL6A4P2-201ENST00000430317 CCDC30Q5VVM6 783 aa11.48□□□□□ -0.57
COL6A4P2-201ENST00000430317 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
COL6A4P2-201ENST00000430317 C5P01031 1676 aa11.48□□□□□ -0.57
COL6A4P2-201ENST00000430317 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
COL6A4P2-201ENST00000430317 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
COL6A4P2-201ENST00000430317 LHX8Q68G74 356 aa11.47□□□□□ -0.57
COL6A4P2-201ENST00000430317 TJP1Q07157 1748 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 KCNQ3O43525 872 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 APBA3O96018 575 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
COL6A4P2-201ENST00000430317 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
COL6A4P2-201ENST00000430317 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
COL6A4P2-201ENST00000430317 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-201ENST00000430317 RCAN3Q9UKA8 241 aa11.45□□□□□ -0.58
COL6A4P2-201ENST00000430317 COL5A3P25940 1745 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-201ENST00000430317 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
COL6A4P2-201ENST00000430317 ELL2O00472 640 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P2-201ENST00000430317 VAMP4O75379 141 aa11.44□□□□□ -0.58
COL6A4P2-201ENST00000430317 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P2-201ENST00000430317 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
COL6A4P2-201ENST00000430317 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
COL6A4P2-201ENST00000430317 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
COL6A4P2-201ENST00000430317 HYPKQ9NX55 129 aa11.43□□□□□ -0.58
COL6A4P2-201ENST00000430317 RREB1Q92766 1687 aa11.43□□□□□ -0.58
COL6A4P2-201ENST00000430317 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 IPO8O15397 1037 aaKnown RBP11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 RARSP54136 660 aaKnown RBP11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 TXNRD1Q16881 649 aa11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 PTF1AQ7RTS3 328 aa11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 DNAJC10Q8IXB1 793 aa11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 DDX21Q9NR30 783 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 CCDC87Q9NVE4 849 aa11.42□□□□□ -0.58
COL6A4P2-201ENST00000430317 PTPRCP08575 1304 aa11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 C4BP0C0L5 1744 aa11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 CYP19A1P11511 503 aaPredicted RBP11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 MS4A1P11836 297 aa11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 AK7Q96M32 723 aa11.41□□□□□ -0.58
COL6A4P2-201ENST00000430317 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 IL6STP40189 918 aaPredicted RBP11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 CHPF2Q9P2E5 772 aa11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 USP16Q9Y5T5 823 aa11.4□□□□□ -0.58
COL6A4P2-201ENST00000430317 A0A087WZG4 1122 aa11.39□□□□□ -0.59
COL6A4P2-201ENST00000430317 ITPK1Q13572 414 aa11.39□□□□□ -0.59
COL6A4P2-201ENST00000430317 FLAD1Q8NFF5 587 aa11.39□□□□□ -0.59
COL6A4P2-201ENST00000430317 ARHGAP45Q92619 1136 aa11.39□□□□□ -0.59
COL6A4P2-201ENST00000430317 CAMKK2Q96RR4 588 aa11.39□□□□□ -0.59
COL6A4P2-201ENST00000430317 PRAMEF22A3QJZ6 481 aa11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 RGL2O15211 777 aa11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 REM2Q8IYK8 340 aaPredicted RBP11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 LINC00116Q8NCU8 138 aa11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 API5Q9BZZ5 524 aaKnown RBP11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
COL6A4P2-201ENST00000430317 GNPATO15228 680 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 RPS6KA4O75676 772 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 SSFA2P28290 1259 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 EN1Q05925 392 aaPredicted RBP11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 FLIIQ13045 1269 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 FKBP5Q13451 457 aaPredicted RBP11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 NBPF14Q5TI25 921 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 ZKSCAN2Q63HK3 967 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 KIF6Q6ZMV9 814 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 COL15A1P39059 1388 aa11.37□□□□□ -0.59
COL6A4P2-201ENST00000430317 QSER1Q2KHR3 1735 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 A1BGP04217 495 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 MYL6BP14649 208 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 PDIA6Q15084 440 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 INTS5Q6P9B9 1019 aaKnown RBP11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 LRRC4BQ9NT99 713 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 STK32BQ9NY57 414 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 ZNF330Q9Y3S2 320 aaPredicted RBP11.36□□□□□ -0.59
COL6A4P2-201ENST00000430317 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 HSP90AB3PQ58FF7 597 aa11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 ATF7IPQ6VMQ6 1270 aa11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 PROM2Q8N271 834 aa11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 FRAT1Q92837 279 aaPredicted RBP11.35□□□□□ -0.59
COL6A4P2-201ENST00000430317 UBR3Q6ZT12 1888 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms