RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
HDAC4-202ENST00000430200 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
HDAC4-202ENST00000430200 RFC4P35249 363 aa15.88■□□□□ 0.13
HDAC4-202ENST00000430200 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
HDAC4-202ENST00000430200 KCNQ3O43525 872 aa15.87■□□□□ 0.13
HDAC4-202ENST00000430200 ZNF496Q96IT1 587 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-202ENST00000430200 BCL2L12Q9HB09 334 aa15.87■□□□□ 0.13
HDAC4-202ENST00000430200 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
HDAC4-202ENST00000430200 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
HDAC4-202ENST00000430200 GRIN3BO60391 1043 aa15.86■□□□□ 0.13
HDAC4-202ENST00000430200 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
HDAC4-202ENST00000430200 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
HDAC4-202ENST00000430200 POLRMTO00411 1230 aaKnown RBP15.85■□□□□ 0.13
HDAC4-202ENST00000430200 DPEP1P16444 411 aa15.85■□□□□ 0.13
HDAC4-202ENST00000430200 KCNA3P22001 575 aa15.85■□□□□ 0.13
HDAC4-202ENST00000430200 USPL1Q5W0Q7 1092 aa15.85■□□□□ 0.13
HDAC4-202ENST00000430200 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
HDAC4-202ENST00000430200 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
HDAC4-202ENST00000430200 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.12
HDAC4-202ENST00000430200 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
HDAC4-202ENST00000430200 TM4SF1P30408 202 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDAC4-202ENST00000430200 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 MCM10Q7L590 875 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 VSIG10Q8N0Z9 540 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 PARP3Q9Y6F1 533 aa15.82■□□□□ 0.12
HDAC4-202ENST00000430200 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
HDAC4-202ENST00000430200 CHRNA5P30532 468 aa15.81■□□□□ 0.12
HDAC4-202ENST00000430200 NUP98P52948 1817 aa15.81■□□□□ 0.12
HDAC4-202ENST00000430200 TEFQ10587 303 aa15.81■□□□□ 0.12
HDAC4-202ENST00000430200 NFIXQ14938 502 aa15.81■□□□□ 0.12
HDAC4-202ENST00000430200 FER1L6Q2WGJ9 1857 aa15.81■□□□□ 0.12
HDAC4-202ENST00000430200 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-202ENST00000430200 EIF5P55010 431 aaKnown RBP15.8■□□□□ 0.12
HDAC4-202ENST00000430200 C1QTNF8P60827 252 aa15.8■□□□□ 0.12
HDAC4-202ENST00000430200 TGFB2P61812 414 aa15.8■□□□□ 0.12
HDAC4-202ENST00000430200 NARFQ9UHQ1 456 aa15.8■□□□□ 0.12
HDAC4-202ENST00000430200 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
HDAC4-202ENST00000430200 DICER1Q9UPY3 1922 aaKnown RBP15.79■□□□□ 0.12
HDAC4-202ENST00000430200 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
HDAC4-202ENST00000430200 ZNF526Q8TF50 670 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-202ENST00000430200 SLX4Q8IY92 1834 aa15.78■□□□□ 0.12
HDAC4-202ENST00000430200 GIGYF1O75420 1035 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-202ENST00000430200 A1BGP04217 495 aa15.77■□□□□ 0.12
HDAC4-202ENST00000430200 PLEKHF1Q96S99 279 aa15.77■□□□□ 0.12
HDAC4-202ENST00000430200 BTBD11A6QL63 1104 aa15.76■□□□□ 0.11
HDAC4-202ENST00000430200 ZPR1O75312 459 aa15.76■□□□□ 0.11
HDAC4-202ENST00000430200 FCHSD2O94868 740 aa15.76■□□□□ 0.11
HDAC4-202ENST00000430200 ANKRD36CQ5JPF3 1778 aa15.76■□□□□ 0.11
HDAC4-202ENST00000430200 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
HDAC4-202ENST00000430200 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
HDAC4-202ENST00000430200 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
HDAC4-202ENST00000430200 NUDCQ9Y266 331 aa15.75■□□□□ 0.11
HDAC4-202ENST00000430200 USP16Q9Y5T5 823 aa15.75■□□□□ 0.11
HDAC4-202ENST00000430200 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
HDAC4-202ENST00000430200 TBC1D2BQ9UPU7 963 aa15.74■□□□□ 0.11
HDAC4-202ENST00000430200 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-202ENST00000430200 STARD3NLO95772 234 aa15.73■□□□□ 0.11
HDAC4-202ENST00000430200 SERPINB2P05120 415 aa15.73■□□□□ 0.11
HDAC4-202ENST00000430200 PRELPP51888 382 aa15.73■□□□□ 0.11
HDAC4-202ENST00000430200 BICDL1Q6ZP65 573 aa15.73■□□□□ 0.11
HDAC4-202ENST00000430200 CCDC24Q8N4L8 307 aa15.73■□□□□ 0.11
HDAC4-202ENST00000430200 MIS18AQ9NYP9 233 aa15.73■□□□□ 0.11
HDAC4-202ENST00000430200 LAMB2P55268 1798 aa15.72■□□□□ 0.11
HDAC4-202ENST00000430200 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
HDAC4-202ENST00000430200 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
HDAC4-202ENST00000430200 IL6STP40189 918 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-202ENST00000430200 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
HDAC4-202ENST00000430200 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
HDAC4-202ENST00000430200 KIF3CO14782 793 aa15.71■□□□□ 0.11
HDAC4-202ENST00000430200 RASSF7Q02833 373 aa15.71■□□□□ 0.11
HDAC4-202ENST00000430200 ARHGAP27Q6ZUM4 889 aa15.71■□□□□ 0.11
HDAC4-202ENST00000430200 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-202ENST00000430200 PIM2Q9P1W9 311 aa15.71■□□□□ 0.11
HDAC4-202ENST00000430200 WDR90Q96KV7 1748 aa15.71■□□□□ 0.1
HDAC4-202ENST00000430200 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
HDAC4-202ENST00000430200 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
HDAC4-202ENST00000430200 RTF1Q92541 710 aaKnown RBP15.69■□□□□ 0.1
HDAC4-202ENST00000430200 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
HDAC4-202ENST00000430200 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
HDAC4-202ENST00000430200 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
HDAC4-202ENST00000430200 C9orf131Q5VYM1 1079 aa15.68■□□□□ 0.1
HDAC4-202ENST00000430200 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
HDAC4-202ENST00000430200 NMRK2Q9NPI5 230 aa15.68■□□□□ 0.1
HDAC4-202ENST00000430200 A0A087WZG4 1122 aa15.67■□□□□ 0.1
HDAC4-202ENST00000430200 DZIP3Q86Y13 1208 aaKnown RBP15.67■□□□□ 0.1
HDAC4-202ENST00000430200 SNRPA1P09661 255 aaKnown RBP15.66■□□□□ 0.1
HDAC4-202ENST00000430200 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
HDAC4-202ENST00000430200 NFKBIEO00221 500 aa15.65■□□□□ 0.1
HDAC4-202ENST00000430200 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-202ENST00000430200 ABCC12Q96J65 1359 aa15.64■□□□□ 0.09
HDAC4-202ENST00000430200 EIF4A1P60842 406 aaKnown RBP15.64■□□□□ 0.09
HDAC4-202ENST00000430200 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
HDAC4-202ENST00000430200 PCNTO95613 3336 aa15.64■□□□□ 0.09
HDAC4-202ENST00000430200 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
HDAC4-202ENST00000430200 TAF1P21675 1872 aa15.63■□□□□ 0.09
HDAC4-202ENST00000430200 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
HDAC4-202ENST00000430200 HLFQ16534 295 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms