RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
CALD1-207ENST00000430085 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
CALD1-207ENST00000430085 NUCB1Q02818 461 aa17.92■□□□□ 0.46
CALD1-207ENST00000430085 ANKRD44Q8N8A2 993 aa17.92■□□□□ 0.46
CALD1-207ENST00000430085 GJD4Q96KN9 370 aaPredicted RBP17.92■□□□□ 0.46
CALD1-207ENST00000430085 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
CALD1-207ENST00000430085 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
CALD1-207ENST00000430085 PRAMEF22A3QJZ6 481 aa17.91■□□□□ 0.46
CALD1-207ENST00000430085 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
CALD1-207ENST00000430085 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 ANXA1P04083 346 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 GNAI3P08754 354 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
CALD1-207ENST00000430085 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 ATP10DQ9P241 1426 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 ANP32AP39687 249 aaKnown RBP17.9■□□□□ 0.46
CALD1-207ENST00000430085 CEP85Q6P2H3 762 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
CALD1-207ENST00000430085 HYPKQ9NX55 129 aa17.9■□□□□ 0.46
CALD1-207ENST00000430085 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.45
CALD1-207ENST00000430085 GNAI2P04899 355 aa17.89■□□□□ 0.45
CALD1-207ENST00000430085 SNRPA1P09661 255 aaKnown RBP17.88■□□□□ 0.45
CALD1-207ENST00000430085 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 DNAAF4Q8WXU2 420 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 C5P01031 1676 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 HMMRO75330 724 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
CALD1-207ENST00000430085 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 LNPKQ9C0E8 428 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
CALD1-207ENST00000430085 DDX21Q9NR30 783 aaKnown RBP eCLIP17.88■□□□□ 0.45
CALD1-207ENST00000430085 RXRBP28702 533 aa17.87■□□□□ 0.45
CALD1-207ENST00000430085 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
CALD1-207ENST00000430085 PROSER3Q2NL68 480 aa17.87■□□□□ 0.45
CALD1-207ENST00000430085 DCTPP1Q9H773 170 aa17.86■□□□□ 0.45
CALD1-207ENST00000430085 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
CALD1-207ENST00000430085 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
CALD1-207ENST00000430085 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
CALD1-207ENST00000430085 ADCY9O60503 1353 aa17.85■□□□□ 0.45
CALD1-207ENST00000430085 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
CALD1-207ENST00000430085 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
CALD1-207ENST00000430085 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
CALD1-207ENST00000430085 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
CALD1-207ENST00000430085 DISP2A7MBM2 1401 aa17.84■□□□□ 0.45
CALD1-207ENST00000430085 BEND3Q5T5X7 828 aa17.84■□□□□ 0.45
CALD1-207ENST00000430085 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
CALD1-207ENST00000430085 USP44Q9H0E7 712 aa17.84■□□□□ 0.45
CALD1-207ENST00000430085 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
CALD1-207ENST00000430085 PDIA6Q15084 440 aa17.83■□□□□ 0.44
CALD1-207ENST00000430085 BRWD3Q6RI45 1802 aa17.82■□□□□ 0.44
CALD1-207ENST00000430085 MYL6BP14649 208 aa17.82■□□□□ 0.44
CALD1-207ENST00000430085 AIMP1Q12904 312 aaKnown RBP17.82■□□□□ 0.44
CALD1-207ENST00000430085 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
CALD1-207ENST00000430085 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
CALD1-207ENST00000430085 LRRFIP2Q9Y608 721 aaKnown RBP17.82■□□□□ 0.44
CALD1-207ENST00000430085 LAMB4A4D0S4 1761 aa17.81■□□□□ 0.44
CALD1-207ENST00000430085 A0A0G2JS52 829 aa17.81■□□□□ 0.44
CALD1-207ENST00000430085 EXOC5O00471 708 aa17.81■□□□□ 0.44
CALD1-207ENST00000430085 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
CALD1-207ENST00000430085 MYT1Q01538 1121 aa17.81■□□□□ 0.44
CALD1-207ENST00000430085 PAPPAQ13219 1627 aa17.81■□□□□ 0.44
CALD1-207ENST00000430085 SEPT12Q8IYM1 358 aa17.8■□□□□ 0.44
CALD1-207ENST00000430085 CDCA7Q9BWT1 371 aaPredicted RBP17.8■□□□□ 0.44
CALD1-207ENST00000430085 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
CALD1-207ENST00000430085 TOGARAM1Q9Y4F4 1720 aa17.8■□□□□ 0.44
CALD1-207ENST00000430085 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
CALD1-207ENST00000430085 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
CALD1-207ENST00000430085 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
CALD1-207ENST00000430085 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
CALD1-207ENST00000430085 KCPQ6ZWJ8 1503 aa17.78■□□□□ 0.44
CALD1-207ENST00000430085 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
CALD1-207ENST00000430085 COPS6Q7L5N1 327 aa17.78■□□□□ 0.44
CALD1-207ENST00000430085 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
CALD1-207ENST00000430085 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
CALD1-207ENST00000430085 NBPF7P0C2Y1 421 aaPredicted RBP17.77■□□□□ 0.44
CALD1-207ENST00000430085 NEXNQ0ZGT2 675 aa17.77■□□□□ 0.44
CALD1-207ENST00000430085 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
CALD1-207ENST00000430085 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.44
CALD1-207ENST00000430085 HDAC5Q9UQL6 1122 aa17.77■□□□□ 0.44
CALD1-207ENST00000430085 APBB1O00213 710 aa17.76■□□□□ 0.43
CALD1-207ENST00000430085 IPO9Q96P70 1041 aaKnown RBP17.76■□□□□ 0.43
CALD1-207ENST00000430085 PNMA6EA0A0J9YXQ4 647 aa17.76■□□□□ 0.43
CALD1-207ENST00000430085 PIP4K2AP48426 406 aaPredicted RBP17.76■□□□□ 0.43
CALD1-207ENST00000430085 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
CALD1-207ENST00000430085 DDB1Q16531 1140 aa17.75■□□□□ 0.43
CALD1-207ENST00000430085 CWF19L2Q2TBE0 894 aaKnown RBP17.75■□□□□ 0.43
CALD1-207ENST00000430085 ANKRD13DQ6ZTN6 518 aa17.75■□□□□ 0.43
CALD1-207ENST00000430085 EP400Q96L91 3159 aa17.75■□□□□ 0.43
CALD1-207ENST00000430085 BMP2KLQ5H9B9 411 aa17.74■□□□□ 0.43
CALD1-207ENST00000430085 LRP10Q7Z4F1 713 aa17.74■□□□□ 0.43
CALD1-207ENST00000430085 PIGBQ92521 554 aa17.74■□□□□ 0.43
CALD1-207ENST00000430085 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
CALD1-207ENST00000430085 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
CALD1-207ENST00000430085 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
CALD1-207ENST00000430085 ITGB4P16144 1822 aa17.73■□□□□ 0.43
CALD1-207ENST00000430085 SMARCA5O60264 1052 aaPredicted RBP17.72■□□□□ 0.43
CALD1-207ENST00000430085 PPP1R42Q7Z4L9 355 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms