RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
HMGA1P4-201ENST00000428643 KCNQ4P56696 695 aa10.12□□□□□ -0.79
HMGA1P4-201ENST00000428643 ITPK1Q13572 414 aa10.12□□□□□ -0.79
HMGA1P4-201ENST00000428643 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.12□□□□□ -0.79
HMGA1P4-201ENST00000428643 DBF4Q9UBU7 674 aaPredicted RBP10.12□□□□□ -0.79
HMGA1P4-201ENST00000428643 USP16Q9Y5T5 823 aa10.12□□□□□ -0.79
HMGA1P4-201ENST00000428643 LAMB4A4D0S4 1761 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 ANXA1P04083 346 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 CYP19A1P11511 503 aaPredicted RBP10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 MYL6BP14649 208 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 PIP4K2AP48426 406 aaPredicted RBP10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 PROSER3Q2NL68 480 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 MRPL50Q8N5N7 158 aaKnown RBP10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 DDX21Q9NR30 783 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 ZNF330Q9Y3S2 320 aaPredicted RBP10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 SRCAPQ6ZRS2 3230 aa10.11□□□□□ -0.79
HMGA1P4-201ENST00000428643 TJP1Q07157 1748 aa10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 A1BGP04217 495 aa10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 CRKLP46109 303 aaKnown RBP10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 SLC27A3Q5K4L6 730 aa10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 LINC00116Q8NCU8 138 aa10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 HYPKQ9NX55 129 aa10.1□□□□□ -0.79
HMGA1P4-201ENST00000428643 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 IPO8O15397 1037 aaKnown RBP10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 PLIN1O60240 522 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NEFLP07196 543 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 BAG6P46379 1132 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 FLIIQ13045 1269 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 FKBP5Q13451 457 aaPredicted RBP10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 TXNRD1Q16881 649 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NBPF14Q5TI25 921 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 ZKSCAN2Q63HK3 967 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NBPF10Q6P3W6 841 aaKnown RBP10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NPM2Q86SE8 214 aaKnown RBP10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
HMGA1P4-201ENST00000428643 PTPRCP08575 1304 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 CNTNAP4Q9C0A0 1308 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 PLSCR1O15162 318 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 GNPATO15228 680 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 BRPF1P55201 1214 aaPredicted RBP10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 AIMP1Q12904 312 aaKnown RBP10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 PDIA6Q15084 440 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 G2E3Q7L622 706 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 FTSJ3Q8IY81 847 aaKnown RBP10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 XAGE3Q8WTP9 111 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 AK7Q96M32 723 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 API5Q9BZZ5 524 aaKnown RBP10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
HMGA1P4-201ENST00000428643 LY75O60449 1722 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 ZNF831Q5JPB2 1677 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 TRIM27P14373 513 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 INTS5Q6P9B9 1019 aaKnown RBP10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 KIF6Q6ZMV9 814 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 ARXQ96QS3 562 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 PHAXQ9H814 394 aaKnown RBP10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
HMGA1P4-201ENST00000428643 KAT6BQ8WYB5 2073 aa10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 EP400Q96L91 3159 aa10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 HMGB2P26583 209 aaKnown RBP10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 IRX6P78412 446 aaPredicted RBP10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 COPS6Q7L5N1 327 aa10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
HMGA1P4-201ENST00000428643 C4BP0C0L5 1744 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 COL15A1P39059 1388 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 F6X3S4 739 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 PHF14O94880 888 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 MS4A1P11836 297 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 EZH2Q15910 746 aaKnown RBP10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 SLC4A10Q6U841 1118 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 DZIP1LQ8IYY4 767 aaKnown RBP10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 PROM2Q8N271 834 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 ARHGAP45Q92619 1136 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 CAMKK2Q96RR4 588 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 TNNQ9UQP3 1299 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 RTCBQ9Y3I0 505 aaKnown RBP10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 RGPD3A6NKT7 1758 aaPredicted RBP10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 RGPD4Q7Z3J3 1758 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 ABCC4O15439 1325 aa10.05□□□□□ -0.8
HMGA1P4-201ENST00000428643 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 ADCY9O60503 1353 aa10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 RREB1Q92766 1687 aa10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 A0A087WZG4 1122 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms