RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 C5P01031 1676 aa17.16■□□□□ 0.34
NCBP2-205ENST00000428425 CPDO75976 1380 aa17.16■□□□□ 0.34
NCBP2-205ENST00000428425 HSPA1LP34931 641 aa17.16■□□□□ 0.34
NCBP2-205ENST00000428425 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
NCBP2-205ENST00000428425 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
NCBP2-205ENST00000428425 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
NCBP2-205ENST00000428425 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 PDE1AP54750 535 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
NCBP2-205ENST00000428425 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
NCBP2-205ENST00000428425 PDIA6Q15084 440 aa17.14■□□□□ 0.33
NCBP2-205ENST00000428425 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
NCBP2-205ENST00000428425 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
NCBP2-205ENST00000428425 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
NCBP2-205ENST00000428425 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
NCBP2-205ENST00000428425 ABCC6O95255 1503 aa17.13■□□□□ 0.33
NCBP2-205ENST00000428425 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
NCBP2-205ENST00000428425 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
NCBP2-205ENST00000428425 CWF19L2Q2TBE0 894 aaKnown RBP17.13■□□□□ 0.33
NCBP2-205ENST00000428425 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
NCBP2-205ENST00000428425 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
NCBP2-205ENST00000428425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.338e-8■■□□□ 13.4
NCBP2-205ENST00000428425 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
NCBP2-205ENST00000428425 OSBPL3Q9H4L5 887 aa17.12■□□□□ 0.33
NCBP2-205ENST00000428425 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
NCBP2-205ENST00000428425 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
NCBP2-205ENST00000428425 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
NCBP2-205ENST00000428425 POLA2Q14181 598 aa17.11■□□□□ 0.33
NCBP2-205ENST00000428425 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
NCBP2-205ENST00000428425 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
NCBP2-205ENST00000428425 MX1P20591 662 aa17.1■□□□□ 0.33
NCBP2-205ENST00000428425 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
NCBP2-205ENST00000428425 MRC1P22897 1456 aa17.1■□□□□ 0.33
NCBP2-205ENST00000428425 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
NCBP2-205ENST00000428425 MYL6BP14649 208 aa17.09■□□□□ 0.33
NCBP2-205ENST00000428425 HSCBQ8IWL3 235 aa17.09■□□□□ 0.33
NCBP2-205ENST00000428425 DCAF5Q96JK2 942 aa17.09■□□□□ 0.33
NCBP2-205ENST00000428425 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
NCBP2-205ENST00000428425 ABCA3Q99758 1704 aa17.09■□□□□ 0.33
NCBP2-205ENST00000428425 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
NCBP2-205ENST00000428425 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.33
NCBP2-205ENST00000428425 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.33
NCBP2-205ENST00000428425 USP16Q9Y5T5 823 aa17.08■□□□□ 0.33
NCBP2-205ENST00000428425 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.32
NCBP2-205ENST00000428425 NUTM1Q86Y26 1132 aa17.08■□□□□ 0.32
NCBP2-205ENST00000428425 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
NCBP2-205ENST00000428425 GLI3P10071 1580 aa17.07■□□□□ 0.32
NCBP2-205ENST00000428425 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
NCBP2-205ENST00000428425 SNX21Q969T3 373 aa17.07■□□□□ 0.32
NCBP2-205ENST00000428425 C9orf78Q9NZ63 289 aaPredicted RBP17.06■□□□□ 0.32
NCBP2-205ENST00000428425 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 IGKV5-2P06315 115 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 KAZALD1Q96I82 304 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 CABP4P57796 275 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
NCBP2-205ENST00000428425 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
NCBP2-205ENST00000428425 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
NCBP2-205ENST00000428425 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
NCBP2-205ENST00000428425 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
NCBP2-205ENST00000428425 PARP4Q9UKK3 1724 aaKnown RBP17.04■□□□□ 0.32
NCBP2-205ENST00000428425 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
NCBP2-205ENST00000428425 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
NCBP2-205ENST00000428425 RILPL2Q969X0 211 aa17.03■□□□□ 0.32
NCBP2-205ENST00000428425 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
NCBP2-205ENST00000428425 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.32
NCBP2-205ENST00000428425 MTX1Q13505 466 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.32
NCBP2-205ENST00000428425 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 GRM8O00222 908 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 RAB11FIP3O75154 756 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
NCBP2-205ENST00000428425 DDIT3P35638 169 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
NCBP2-205ENST00000428425 SHANK3Q9BYB0 1731 aa17.02■□□□□ 0.31
NCBP2-205ENST00000428425 ERC2O15083 957 aa17.01■□□□□ 0.31
NCBP2-205ENST00000428425 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
NCBP2-205ENST00000428425 IL25Q9H293 177 aa17.01■□□□□ 0.31
NCBP2-205ENST00000428425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
NCBP2-205ENST00000428425 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
NCBP2-205ENST00000428425 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
NCBP2-205ENST00000428425 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
NCBP2-205ENST00000428425 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
NCBP2-205ENST00000428425 PCDH11XQ9BZA7 1347 aa17.01■□□□□ 0.31
NCBP2-205ENST00000428425 PCDH11YQ9BZA8 1340 aa17.01■□□□□ 0.31
NCBP2-205ENST00000428425 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
NCBP2-205ENST00000428425 MYD88Q99836 296 aa17■□□□□ 0.31
NCBP2-205ENST00000428425 UTYO14607 1347 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms