RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
PHF1-205ENST00000428274 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
PHF1-205ENST00000428274 NEFMP07197 916 aa17.4■□□□□ 0.38
PHF1-205ENST00000428274 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
PHF1-205ENST00000428274 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
PHF1-205ENST00000428274 TEX13AQ9BXU3 409 aaPredicted RBP17.4■□□□□ 0.38
PHF1-205ENST00000428274 SRP68Q9UHB9 627 aaKnown RBP17.4■□□□□ 0.38
PHF1-205ENST00000428274 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
PHF1-205ENST00000428274 STARD3NLO95772 234 aa17.39■□□□□ 0.37
PHF1-205ENST00000428274 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
PHF1-205ENST00000428274 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
PHF1-205ENST00000428274 EIF5P55010 431 aaKnown RBP17.37■□□□□ 0.37
PHF1-205ENST00000428274 FKBP8Q14318 412 aa17.37■□□□□ 0.37
PHF1-205ENST00000428274 NARFQ9UHQ1 456 aa17.37■□□□□ 0.37
PHF1-205ENST00000428274 COL15A1P39059 1388 aa17.37■□□□□ 0.37
PHF1-205ENST00000428274 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
PHF1-205ENST00000428274 ZPR1O75312 459 aa17.35■□□□□ 0.37
PHF1-205ENST00000428274 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
PHF1-205ENST00000428274 TM4SF1P30408 202 aa17.35■□□□□ 0.37
PHF1-205ENST00000428274 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
PHF1-205ENST00000428274 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
PHF1-205ENST00000428274 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 DDR1Q08345 913 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
PHF1-205ENST00000428274 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.37
PHF1-205ENST00000428274 A1BGP04217 495 aa17.33■□□□□ 0.36
PHF1-205ENST00000428274 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
PHF1-205ENST00000428274 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
PHF1-205ENST00000428274 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
PHF1-205ENST00000428274 BCL2L12Q9HB09 334 aa17.33■□□□□ 0.36
PHF1-205ENST00000428274 A0A087WZG4 1122 aa17.32■□□□□ 0.36
PHF1-205ENST00000428274 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
PHF1-205ENST00000428274 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
PHF1-205ENST00000428274 DPEP1P16444 411 aa17.32■□□□□ 0.36
PHF1-205ENST00000428274 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
PHF1-205ENST00000428274 RIPK4P57078 832 aa17.32■□□□□ 0.36
PHF1-205ENST00000428274 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
PHF1-205ENST00000428274 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
PHF1-205ENST00000428274 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
PHF1-205ENST00000428274 N4BP2Q86UW6 1770 aaPredicted RBP17.31■□□□□ 0.36
PHF1-205ENST00000428274 POLRMTO00411 1230 aaKnown RBP17.31■□□□□ 0.36
PHF1-205ENST00000428274 TGFB2P61812 414 aa17.31■□□□□ 0.36
PHF1-205ENST00000428274 KCNA3P22001 575 aa17.3■□□□□ 0.36
PHF1-205ENST00000428274 NFIXQ14938 502 aa17.3■□□□□ 0.36
PHF1-205ENST00000428274 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHF1-205ENST00000428274 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
PHF1-205ENST00000428274 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
PHF1-205ENST00000428274 C1QTNF8P60827 252 aa17.29■□□□□ 0.36
PHF1-205ENST00000428274 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
PHF1-205ENST00000428274 NRXN2Q9P2S2 1712 aa17.29■□□□□ 0.36
PHF1-205ENST00000428274 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
PHF1-205ENST00000428274 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
PHF1-205ENST00000428274 TBC1D2BQ9UPU7 963 aa17.28■□□□□ 0.36
PHF1-205ENST00000428274 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
PHF1-205ENST00000428274 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
PHF1-205ENST00000428274 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
PHF1-205ENST00000428274 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
PHF1-205ENST00000428274 LMOD3Q0VAK6 560 aa17.27■□□□□ 0.36
PHF1-205ENST00000428274 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
PHF1-205ENST00000428274 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
PHF1-205ENST00000428274 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
PHF1-205ENST00000428274 ADCY9O60503 1353 aa17.27■□□□□ 0.35
PHF1-205ENST00000428274 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
PHF1-205ENST00000428274 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
PHF1-205ENST00000428274 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
PHF1-205ENST00000428274 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
PHF1-205ENST00000428274 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
PHF1-205ENST00000428274 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
PHF1-205ENST00000428274 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
PHF1-205ENST00000428274 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
PHF1-205ENST00000428274 CHRNA5P30532 468 aa17.25■□□□□ 0.35
PHF1-205ENST00000428274 SERPINB2P05120 415 aa17.24■□□□□ 0.35
PHF1-205ENST00000428274 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
PHF1-205ENST00000428274 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
PHF1-205ENST00000428274 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
PHF1-205ENST00000428274 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
PHF1-205ENST00000428274 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
PHF1-205ENST00000428274 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
PHF1-205ENST00000428274 ARFGEF1Q9Y6D6 1849 aa17.22■□□□□ 0.35
PHF1-205ENST00000428274 CLEC4GQ6UXB4 293 aa17.22■□□□□ 0.35
PHF1-205ENST00000428274 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
PHF1-205ENST00000428274 CHL1O00533 1208 aa17.21■□□□□ 0.35
PHF1-205ENST00000428274 RGL2O15211 777 aa17.21■□□□□ 0.35
PHF1-205ENST00000428274 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
PHF1-205ENST00000428274 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
PHF1-205ENST00000428274 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
PHF1-205ENST00000428274 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
PHF1-205ENST00000428274 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
PHF1-205ENST00000428274 SETDB2Q96T68 719 aa17.19■□□□□ 0.34
PHF1-205ENST00000428274 DLEC1Q9Y238 1755 aa17.19■□□□□ 0.34
PHF1-205ENST00000428274 NUP98P52948 1817 aa17.19■□□□□ 0.34
PHF1-205ENST00000428274 APAF1O14727 1248 aa17.18■□□□□ 0.34
PHF1-205ENST00000428274 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
PHF1-205ENST00000428274 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
PHF1-205ENST00000428274 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
PHF1-205ENST00000428274 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms