RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 A0A087WZG4 1122 aa20.12■□□□□ 0.81
PHF1-204ENST00000427826 MCM10Q7L590 875 aa20.12■□□□□ 0.81
PHF1-204ENST00000427826 CHD4Q14839 1912 aa20.12■□□□□ 0.81
PHF1-204ENST00000427826 COL15A1P39059 1388 aa20.11■□□□□ 0.81
PHF1-204ENST00000427826 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
PHF1-204ENST00000427826 USPL1Q5W0Q7 1092 aa20.11■□□□□ 0.81
PHF1-204ENST00000427826 UBR2Q8IWV8 1755 aa20.11■□□□□ 0.81
PHF1-204ENST00000427826 TM4SF1P30408 202 aa20.1■□□□□ 0.81
PHF1-204ENST00000427826 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
PHF1-204ENST00000427826 C10orf71Q711Q0 1435 aa20.1■□□□□ 0.81
PHF1-204ENST00000427826 EIF5P55010 431 aaKnown RBP20.09■□□□□ 0.81
PHF1-204ENST00000427826 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
PHF1-204ENST00000427826 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
PHF1-204ENST00000427826 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
PHF1-204ENST00000427826 TAF7Q15545 349 aaPredicted RBP20.08■□□□□ 0.81
PHF1-204ENST00000427826 SIPA1L3O60292 1781 aaPredicted RBP20.08■□□□□ 0.8
PHF1-204ENST00000427826 A0A0G2JLW4 131 aa20.07■□□□□ 0.8
PHF1-204ENST00000427826 KCNQ3O43525 872 aa20.07■□□□□ 0.8
PHF1-204ENST00000427826 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
PHF1-204ENST00000427826 IL6STP40189 918 aaPredicted RBP20.07■□□□□ 0.8
PHF1-204ENST00000427826 DDR1Q08345 913 aa20.07■□□□□ 0.8
PHF1-204ENST00000427826 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
PHF1-204ENST00000427826 NFE2L2Q16236 605 aa20.07■□□□□ 0.8
PHF1-204ENST00000427826 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
PHF1-204ENST00000427826 PXDNLA1KZ92 1463 aa20.06■□□□□ 0.8
PHF1-204ENST00000427826 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
PHF1-204ENST00000427826 PNISRQ8TF01 805 aaKnown RBP20.06■□□□□ 0.8
PHF1-204ENST00000427826 DPEP1P16444 411 aa20.05■□□□□ 0.8
PHF1-204ENST00000427826 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
PHF1-204ENST00000427826 WWC3Q9ULE0 1092 aa20.05■□□□□ 0.8
PHF1-204ENST00000427826 KIF13BQ9NQT8 1826 aa20.04■□□□□ 0.8
PHF1-204ENST00000427826 NFIXQ14938 502 aa20.04■□□□□ 0.8
PHF1-204ENST00000427826 A1BGP04217 495 aa20.03■□□□□ 0.8
PHF1-204ENST00000427826 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
PHF1-204ENST00000427826 BCS1LQ9Y276 419 aa20.03■□□□□ 0.8
PHF1-204ENST00000427826 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
PHF1-204ENST00000427826 PIM2Q9P1W9 311 aa20.02■□□□□ 0.8
PHF1-204ENST00000427826 USP16Q9Y5T5 823 aa20.02■□□□□ 0.8
PHF1-204ENST00000427826 SERPINB2P05120 415 aa20■□□□□ 0.79
PHF1-204ENST00000427826 KCNA3P22001 575 aa20■□□□□ 0.79
PHF1-204ENST00000427826 TBC1D2BQ9UPU7 963 aa20■□□□□ 0.79
PHF1-204ENST00000427826 MIS18AQ9NYP9 233 aa19.99■□□□□ 0.79
PHF1-204ENST00000427826 DALRD3Q5D0E6 543 aaKnown RBP19.98■□□□□ 0.79
PHF1-204ENST00000427826 PRAMEF22A3QJZ6 481 aa19.97■□□□□ 0.79
PHF1-204ENST00000427826 RIPK4P57078 832 aa19.97■□□□□ 0.79
PHF1-204ENST00000427826 LMOD3Q0VAK6 560 aa19.97■□□□□ 0.79
PHF1-204ENST00000427826 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
PHF1-204ENST00000427826 BICDL1Q6ZP65 573 aa19.97■□□□□ 0.79
PHF1-204ENST00000427826 DZIP3Q86Y13 1208 aaKnown RBP19.97■□□□□ 0.79
PHF1-204ENST00000427826 CAMTA2O94983 1202 aa19.96■□□□□ 0.79
PHF1-204ENST00000427826 TBC1D9BQ66K14 1250 aa19.96■□□□□ 0.79
PHF1-204ENST00000427826 CLEC4GQ6UXB4 293 aa19.96■□□□□ 0.79
PHF1-204ENST00000427826 ARHGAP27Q6ZUM4 889 aa19.96■□□□□ 0.79
PHF1-204ENST00000427826 SETDB2Q96T68 719 aa19.96■□□□□ 0.79
PHF1-204ENST00000427826 PRKRIP1Q9H875 184 aaPredicted RBP19.96■□□□□ 0.79
PHF1-204ENST00000427826 KIAA1551Q9HCM1 1747 aa19.96■□□□□ 0.79
PHF1-204ENST00000427826 N4BP2Q86UW6 1770 aaPredicted RBP19.95■□□□□ 0.78
PHF1-204ENST00000427826 CHRNA5P30532 468 aa19.95■□□□□ 0.78
PHF1-204ENST00000427826 THUMPD2Q9BTF0 503 aaKnown RBP19.95■□□□□ 0.78
PHF1-204ENST00000427826 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
PHF1-204ENST00000427826 ZNF652Q9Y2D9 606 aa19.95■□□□□ 0.78
PHF1-204ENST00000427826 CARMIL3Q8ND23 1372 aa19.95■□□□□ 0.78
PHF1-204ENST00000427826 RGL2O15211 777 aa19.94■□□□□ 0.78
PHF1-204ENST00000427826 GIGYF1O75420 1035 aaPredicted RBP19.94■□□□□ 0.78
PHF1-204ENST00000427826 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
PHF1-204ENST00000427826 EIF4A1P60842 406 aaKnown RBP19.94■□□□□ 0.78
PHF1-204ENST00000427826 BABAM1Q9NWV8 329 aa19.94■□□□□ 0.78
PHF1-204ENST00000427826 ATP10DQ9P241 1426 aa19.93■□□□□ 0.78
PHF1-204ENST00000427826 H0YIN7 160 aa19.93■□□□□ 0.78
PHF1-204ENST00000427826 PIP4K2AP48426 406 aaPredicted RBP19.93■□□□□ 0.78
PHF1-204ENST00000427826 RUNDC1Q96C34 613 aa19.93■□□□□ 0.78
PHF1-204ENST00000427826 ADCY9O60503 1353 aa19.93■□□□□ 0.78
PHF1-204ENST00000427826 NBPF26B4DH59 902 aa19.92■□□□□ 0.78
PHF1-204ENST00000427826 NBPF10Q6P3W6 841 aaKnown RBP19.92■□□□□ 0.78
PHF1-204ENST00000427826 NBPF15Q8N660 670 aa19.92■□□□□ 0.78
PHF1-204ENST00000427826 BRIP1Q9BX63 1249 aa19.92■□□□□ 0.78
PHF1-204ENST00000427826 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
PHF1-204ENST00000427826 NRXN2Q9P2S2 1712 aa19.91■□□□□ 0.78
PHF1-204ENST00000427826 NPHP1O15259 732 aa19.91■□□□□ 0.78
PHF1-204ENST00000427826 PDE6BP35913 854 aa19.91■□□□□ 0.78
PHF1-204ENST00000427826 C2CD5Q86YS7 1000 aa19.91■□□□□ 0.78
PHF1-204ENST00000427826 GPBP1L1Q9HC44 474 aaPredicted RBP19.91■□□□□ 0.78
PHF1-204ENST00000427826 DLG5Q8TDM6 1919 aa19.91■□□□□ 0.78
PHF1-204ENST00000427826 C1QTNF8P60827 252 aa19.9■□□□□ 0.78
PHF1-204ENST00000427826 PRR5LQ6MZQ0 368 aa19.9■□□□□ 0.78
PHF1-204ENST00000427826 CNBD1Q8NA66 436 aa19.9■□□□□ 0.78
PHF1-204ENST00000427826 SCN7AQ01118 1682 aa19.9■□□□□ 0.78
PHF1-204ENST00000427826 ST5P78524 1137 aa19.89■□□□□ 0.77
PHF1-204ENST00000427826 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
PHF1-204ENST00000427826 TTLL6Q8N841 843 aa19.89■□□□□ 0.77
PHF1-204ENST00000427826 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
PHF1-204ENST00000427826 AFDNP55196 1824 aaKnown RBP19.88■□□□□ 0.77
PHF1-204ENST00000427826 BRCA1P38398 1863 aaKnown RBP19.88■□□□□ 0.77
PHF1-204ENST00000427826 ERBB4Q15303 1308 aa19.87■□□□□ 0.77
PHF1-204ENST00000427826 NEUROD2Q15784 382 aa19.87■□□□□ 0.77
PHF1-204ENST00000427826 NBPF5PQ86XG9 351 aaPredicted RBP19.87■□□□□ 0.77
PHF1-204ENST00000427826 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
PHF1-204ENST00000427826 KDM3BQ7LBC6 1761 aa19.87■□□□□ 0.77
PHF1-204ENST00000427826 ERVV-1B6SEH8 477 aa19.86■□□□□ 0.77
PHF1-204ENST00000427826 ZNF526Q8TF50 670 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms