RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 LINC00116Q8NCU8 138 aa10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 IL17REQ8NFR9 667 aa10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 ASAP1Q9ULH1 1129 aa10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 COL24A1Q17RW2 1714 aa10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 QSER1Q2KHR3 1735 aa10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 CHL1O00533 1208 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 PHKG2P15735 406 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 DCTN1Q14203 1278 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 ZNF428Q96B54 188 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 RCAN3Q9UKA8 241 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 CD2APQ9Y5K6 639 aa10.66□□□□□ -0.7
SMARCAL1-206ENST00000427645 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 TEFQ10587 303 aa10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 ITPK1Q13572 414 aa10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 NKX1-1Q15270 411 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 FLAD1Q8NFF5 587 aa10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 THUMPD2Q9BTF0 503 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 CHMP4AQ9BY43 222 aa10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 ATP10DQ9P241 1426 aa10.65□□□□□ -0.7
SMARCAL1-206ENST00000427645 CEMIPQ8WUJ3 1361 aa10.65□□□□□ -0.71
SMARCAL1-206ENST00000427645 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 FANCIQ9NVI1 1328 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 C5P01031 1676 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 LOC102724428A0A0B4J2F2 783 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 SIK1P57059 783 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 SMARCC1Q92922 1105 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 LGR6Q9HBX8 967 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 TMOD3Q9NYL9 352 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
SMARCAL1-206ENST00000427645 ERVV-2B6SEH9 535 aa10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 GNPATO15228 680 aa10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 CAPN15O75808 1086 aa10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 MBIPQ9NS73 344 aa10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 ATG3Q9NT62 314 aa10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
SMARCAL1-206ENST00000427645 SOS1Q07889 1333 aaPredicted RBP10.62□□□□□ -0.71
SMARCAL1-206ENST00000427645 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
SMARCAL1-206ENST00000427645 NEFLP07196 543 aa10.62□□□□□ -0.71
SMARCAL1-206ENST00000427645 VIRMAQ69YN4 1812 aaKnown RBP10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 BTBD11A6QL63 1104 aa10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 SSFA2P28290 1259 aa10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 CABP4P57796 275 aa10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 SLC52A2Q9HAB3 445 aa10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 SCN11AQ9UI33 1791 aa10.61□□□□□ -0.71
SMARCAL1-206ENST00000427645 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
SMARCAL1-206ENST00000427645 MMP10P09238 476 aa10.6□□□□□ -0.71
SMARCAL1-206ENST00000427645 TWISTNBQ3B726 338 aaPredicted RBP10.6□□□□□ -0.71
SMARCAL1-206ENST00000427645 ALDH1L2Q3SY69 923 aa10.6□□□□□ -0.71
SMARCAL1-206ENST00000427645 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-206ENST00000427645 RNF123Q5XPI4 1314 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 ITGB4P16144 1822 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 TAF1LQ8IZX4 1826 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 A0A0G2JLW4 131 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 VAMP4O75379 141 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 RARSP54136 660 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 NFATC2IPQ8NCF5 419 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 MIS18AQ9NYP9 233 aa10.59□□□□□ -0.71
SMARCAL1-206ENST00000427645 ADCY9O60503 1353 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 HOXB7P09629 217 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 MS4A1P11836 297 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 TRAPPC3LQ5T215 181 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 ERICH6BQ5W0A0 696 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 BCS1LQ9Y276 419 aa10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 KDM6AO15550 1401 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-206ENST00000427645 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 POLA2Q14181 598 aa10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 TTC5Q8N0Z6 440 aa10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-206ENST00000427645 UBR3Q6ZT12 1888 aa10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 ELL2O00472 640 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 PTCD1O75127 700 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 HSPA6P17066 643 aa10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 TSPYL6Q8N831 410 aa10.56□□□□□ -0.72
SMARCAL1-206ENST00000427645 KIF3CO14782 793 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 GYS1P13807 737 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 DPEP1P16444 411 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 IFFO2Q5TF58 517 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 CCDC30Q5VVM6 783 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms