RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
HLA-DQB2-230ENST00000427449 ADCY9O60503 1353 aa21.39■■□□□ 1.02
HLA-DQB2-230ENST00000427449 FKBP8Q14318 412 aa21.39■■□□□ 1.01
HLA-DQB2-230ENST00000427449 NUDCQ9Y266 331 aa21.38■■□□□ 1.01
HLA-DQB2-230ENST00000427449 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
HLA-DQB2-230ENST00000427449 MCM10Q7L590 875 aa21.37■■□□□ 1.01
HLA-DQB2-230ENST00000427449 SBF1O95248 1867 aa21.37■■□□□ 1.01
HLA-DQB2-230ENST00000427449 ARFGEF2Q9Y6D5 1785 aa21.36■■□□□ 1.01
HLA-DQB2-230ENST00000427449 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
HLA-DQB2-230ENST00000427449 TM4SF1P30408 202 aa21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 RFC4P35249 363 aa21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 EIF5P55010 431 aaKnown RBP21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 TEFQ10587 303 aa21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 DDX10Q13206 875 aaKnown RBP21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 GPR162Q16538 588 aa21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 ZNF784Q8NCA9 323 aaPredicted RBP21.35■■□□□ 1.01
HLA-DQB2-230ENST00000427449 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
HLA-DQB2-230ENST00000427449 POLRMTO00411 1230 aaKnown RBP21.34■■□□□ 1.01
HLA-DQB2-230ENST00000427449 KCNA3P22001 575 aa21.33■■□□□ 1.01
HLA-DQB2-230ENST00000427449 CARMIL3Q8ND23 1372 aa21.33■■□□□ 1
HLA-DQB2-230ENST00000427449 CACNA1SQ13698 1873 aa21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 NUP98P52948 1817 aa21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 DCAF8L1A6NGE4 600 aa21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 RALBP1Q15311 655 aa21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 USPL1Q5W0Q7 1092 aa21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 NARFQ9UHQ1 456 aa21.32■■□□□ 1
HLA-DQB2-230ENST00000427449 MYBBP1AQ9BQG0 1328 aaKnown RBP21.3■■□□□ 1
HLA-DQB2-230ENST00000427449 BTBD11A6QL63 1104 aa21.29■■□□□ 1
HLA-DQB2-230ENST00000427449 NFIXQ14938 502 aa21.29■■□□□ 1
HLA-DQB2-230ENST00000427449 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
HLA-DQB2-230ENST00000427449 NFE2L2Q16236 605 aa21.28■■□□□ 1
HLA-DQB2-230ENST00000427449 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
HLA-DQB2-230ENST00000427449 FMNL2Q96PY5 1086 aa21.28■■□□□ 1
HLA-DQB2-230ENST00000427449 WWC3Q9ULE0 1092 aa21.28■■□□□ 1
HLA-DQB2-230ENST00000427449 USP16Q9Y5T5 823 aa21.28■■□□□ 1
HLA-DQB2-230ENST00000427449 TNRC6CQ9HCJ0 1690 aaKnown RBP21.28■■□□□ 1
HLA-DQB2-230ENST00000427449 TGFB2P61812 414 aa21.27■■□□□ 1
HLA-DQB2-230ENST00000427449 THUMPD2Q9BTF0 503 aaKnown RBP21.27■■□□□ 1
HLA-DQB2-230ENST00000427449 CCDC88AQ3V6T2 1871 aa21.26■□□□□ 0.99
HLA-DQB2-230ENST00000427449 A1BGP04217 495 aa21.26■□□□□ 0.99
HLA-DQB2-230ENST00000427449 DPEP1P16444 411 aa21.26■□□□□ 0.99
HLA-DQB2-230ENST00000427449 CANXP27824 592 aaKnown RBP21.26■□□□□ 0.99
HLA-DQB2-230ENST00000427449 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 A0A0G2JLW4 131 aa21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 NBPF26B4DH59 902 aa21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 IL6STP40189 918 aaPredicted RBP21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 FER1L6Q2WGJ9 1857 aa21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 NBPF10Q6P3W6 841 aaKnown RBP21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 NBPF15Q8N660 670 aa21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 PARP3Q9Y6F1 533 aa21.25■□□□□ 0.99
HLA-DQB2-230ENST00000427449 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
HLA-DQB2-230ENST00000427449 CAMTA2O94983 1202 aa21.24■□□□□ 0.99
HLA-DQB2-230ENST00000427449 STARD3NLO95772 234 aa21.24■□□□□ 0.99
HLA-DQB2-230ENST00000427449 PRKRIP1Q9H875 184 aaPredicted RBP21.24■□□□□ 0.99
HLA-DQB2-230ENST00000427449 TIAM2Q8IVF5 1701 aa21.24■□□□□ 0.99
HLA-DQB2-230ENST00000427449 ATP10DQ9P241 1426 aa21.23■□□□□ 0.99
HLA-DQB2-230ENST00000427449 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
HLA-DQB2-230ENST00000427449 MIS18AQ9NYP9 233 aa21.23■□□□□ 0.99
HLA-DQB2-230ENST00000427449 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
HLA-DQB2-230ENST00000427449 TEX13AQ9BXU3 409 aaPredicted RBP21.22■□□□□ 0.99
HLA-DQB2-230ENST00000427449 ZPR1O75312 459 aa21.21■□□□□ 0.99
HLA-DQB2-230ENST00000427449 TBC1D9BQ66K14 1250 aa21.21■□□□□ 0.99
HLA-DQB2-230ENST00000427449 RTF1Q92541 710 aaKnown RBP21.21■□□□□ 0.99
HLA-DQB2-230ENST00000427449 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
HLA-DQB2-230ENST00000427449 SLX4Q8IY92 1834 aa21.2■□□□□ 0.98
HLA-DQB2-230ENST00000427449 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
HLA-DQB2-230ENST00000427449 CHRNA5P30532 468 aa21.19■□□□□ 0.98
HLA-DQB2-230ENST00000427449 EIF4A1P60842 406 aaKnown RBP21.19■□□□□ 0.98
HLA-DQB2-230ENST00000427449 TBC1D2BQ9UPU7 963 aa21.19■□□□□ 0.98
HLA-DQB2-230ENST00000427449 TMPOP42166 694 aaKnown RBP21.18■□□□□ 0.98
HLA-DQB2-230ENST00000427449 LAMB2P55268 1798 aa21.18■□□□□ 0.98
HLA-DQB2-230ENST00000427449 GIGYF1O75420 1035 aaPredicted RBP21.17■□□□□ 0.98
HLA-DQB2-230ENST00000427449 SERPINB2P05120 415 aa21.17■□□□□ 0.98
HLA-DQB2-230ENST00000427449 LRP10Q7Z4F1 713 aa21.17■□□□□ 0.98
HLA-DQB2-230ENST00000427449 TRIM35Q9UPQ4 493 aa21.16■□□□□ 0.98
HLA-DQB2-230ENST00000427449 A0A087WZG4 1122 aa21.15■□□□□ 0.98
HLA-DQB2-230ENST00000427449 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
HLA-DQB2-230ENST00000427449 PRR5LQ6MZQ0 368 aa21.14■□□□□ 0.97
HLA-DQB2-230ENST00000427449 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.97
HLA-DQB2-230ENST00000427449 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
HLA-DQB2-230ENST00000427449 DZIP3Q86Y13 1208 aaKnown RBP21.13■□□□□ 0.97
HLA-DQB2-230ENST00000427449 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
HLA-DQB2-230ENST00000427449 PRELPP51888 382 aa21.12■□□□□ 0.97
HLA-DQB2-230ENST00000427449 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
HLA-DQB2-230ENST00000427449 RGL2O15211 777 aa21.11■□□□□ 0.97
HLA-DQB2-230ENST00000427449 RIPK4P57078 832 aa21.11■□□□□ 0.97
HLA-DQB2-230ENST00000427449 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
HLA-DQB2-230ENST00000427449 PDIA6Q15084 440 aa21.1■□□□□ 0.97
HLA-DQB2-230ENST00000427449 BICDL1Q6ZP65 573 aa21.1■□□□□ 0.97
HLA-DQB2-230ENST00000427449 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
HLA-DQB2-230ENST00000427449 PIM2Q9P1W9 311 aa21.1■□□□□ 0.97
HLA-DQB2-230ENST00000427449 ZNF330Q9Y3S2 320 aaPredicted RBP21.1■□□□□ 0.97
HLA-DQB2-230ENST00000427449 HLFQ16534 295 aa21.09■□□□□ 0.97
HLA-DQB2-230ENST00000427449 CCDC24Q8N4L8 307 aa21.09■□□□□ 0.97
HLA-DQB2-230ENST00000427449 PNNQ9H307 717 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB2-230ENST00000427449 CEP350Q5VT06 3117 aa21.09■□□□□ 0.97
HLA-DQB2-230ENST00000427449 DDX60Q8IY21 1712 aaKnown RBP21.08■□□□□ 0.97
HLA-DQB2-230ENST00000427449 SNED1Q8TER0 1413 aa21.08■□□□□ 0.97
HLA-DQB2-230ENST00000427449 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms