RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 HCN2Q9UL51 889 aa10.47□□□□□ -0.73
LINC00458-202ENST00000427299 IQSEC3Q9UPP2 1182 aaPredicted RBP10.47□□□□□ -0.73
LINC00458-202ENST00000427299 ARAFP10398 606 aa10.46□□□□□ -0.73
LINC00458-202ENST00000427299 SEMA3FQ13275 785 aa10.46□□□□□ -0.73
LINC00458-202ENST00000427299 MTFR1Q15390 333 aa10.46□□□□□ -0.73
LINC00458-202ENST00000427299 XP32Q5T750 250 aa10.46□□□□□ -0.73
LINC00458-202ENST00000427299 LINC00114Q6XXX2 140 aa10.46□□□□□ -0.73
LINC00458-202ENST00000427299 EPXP11678 715 aa10.45□□□□□ -0.74
LINC00458-202ENST00000427299 PIK3CDO00329 1044 aa10.44□□□□□ -0.74
LINC00458-202ENST00000427299 AIDAQ96BJ3 306 aa10.44□□□□□ -0.74
LINC00458-202ENST00000427299 SERTAD1Q9UHV2 236 aa10.44□□□□□ -0.74
LINC00458-202ENST00000427299 USP3Q9Y6I4 520 aa10.44□□□□□ -0.74
LINC00458-202ENST00000427299 A6NJY4 79 aa10.43□□□□□ -0.74
LINC00458-202ENST00000427299 CDK2AP1O14519 115 aa10.43□□□□□ -0.74
LINC00458-202ENST00000427299 ATXN7O15265 892 aaPredicted RBP10.43□□□□□ -0.74
LINC00458-202ENST00000427299 AMPD1P23109 780 aa10.43□□□□□ -0.74
LINC00458-202ENST00000427299 PCDHGA11Q9Y5H2 935 aa10.43□□□□□ -0.74
LINC00458-202ENST00000427299 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
LINC00458-202ENST00000427299 NBPF1Q3BBV0 1214 aa10.42□□□□□ -0.74
LINC00458-202ENST00000427299 BTBD6Q96KE9 485 aa10.42□□□□□ -0.74
LINC00458-202ENST00000427299 SUV39H2Q9H5I1 410 aa10.42□□□□□ -0.74
LINC00458-202ENST00000427299 ZDHHC3Q9NYG2 299 aa10.42□□□□□ -0.74
LINC00458-202ENST00000427299 NEURL1BA8MQ27 555 aa10.41□□□□□ -0.74
LINC00458-202ENST00000427299 MAPTP10636 758 aaKnown RBP10.41□□□□□ -0.74
LINC00458-202ENST00000427299 DGKGP49619 791 aa10.41□□□□□ -0.74
LINC00458-202ENST00000427299 TNP2Q05952 138 aa10.41□□□□□ -0.74
LINC00458-202ENST00000427299 FAM182BQ5T319 152 aa10.41□□□□□ -0.74
LINC00458-202ENST00000427299 DCDC2BA2VCK2 349 aa10.4□□□□□ -0.74
LINC00458-202ENST00000427299 GNB5O14775 395 aa10.4□□□□□ -0.74
LINC00458-202ENST00000427299 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
LINC00458-202ENST00000427299 KLF15Q9UIH9 416 aa10.4□□□□□ -0.74
LINC00458-202ENST00000427299 COG6Q9Y2V7 657 aa10.4□□□□□ -0.74
LINC00458-202ENST00000427299 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
LINC00458-202ENST00000427299 CD33P20138 364 aa10.39□□□□□ -0.75
LINC00458-202ENST00000427299 ZIC5Q96T25 663 aa10.39□□□□□ -0.75
LINC00458-202ENST00000427299 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
LINC00458-202ENST00000427299 ADH6P28332 368 aa10.38□□□□□ -0.75
LINC00458-202ENST00000427299 GRIN2CQ14957 1233 aa10.38□□□□□ -0.75
LINC00458-202ENST00000427299 ALG2Q9H553 416 aa10.38□□□□□ -0.75
LINC00458-202ENST00000427299 AVENQ9NQS1 362 aaPredicted RBP10.38□□□□□ -0.75
LINC00458-202ENST00000427299 PIK3R2O00459 728 aa10.37□□□□□ -0.75
LINC00458-202ENST00000427299 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
LINC00458-202ENST00000427299 BAG6P46379 1132 aa10.37□□□□□ -0.75
LINC00458-202ENST00000427299 EML3Q32P44 896 aa10.37□□□□□ -0.75
LINC00458-202ENST00000427299 FCHSD1Q86WN1 690 aa10.37□□□□□ -0.75
LINC00458-202ENST00000427299 NFATC2IPQ8NCF5 419 aa10.37□□□□□ -0.75
LINC00458-202ENST00000427299 CABP1Q9NZU7 370 aa10.37□□□□□ -0.75
LINC00458-202ENST00000427299 KHNYNO15037 678 aaKnown RBP10.36□□□□□ -0.75
LINC00458-202ENST00000427299 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
LINC00458-202ENST00000427299 CHSY3Q70JA7 882 aa10.36□□□□□ -0.75
LINC00458-202ENST00000427299 SCHIP1Q9P0W5 487 aaPredicted RBP10.36□□□□□ -0.75
LINC00458-202ENST00000427299 BACH1O14867 736 aa10.35□□□□□ -0.75
LINC00458-202ENST00000427299 SKIP12755 728 aa10.35□□□□□ -0.75
LINC00458-202ENST00000427299 GTF2IP78347 998 aa10.35□□□□□ -0.75
LINC00458-202ENST00000427299 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
LINC00458-202ENST00000427299 NOD1Q9Y239 953 aa10.35□□□□□ -0.75
LINC00458-202ENST00000427299 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
LINC00458-202ENST00000427299 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
LINC00458-202ENST00000427299 EFSO43281 561 aa10.34□□□□□ -0.75
LINC00458-202ENST00000427299 LZTS3O60299 673 aaPredicted RBP10.34□□□□□ -0.75
LINC00458-202ENST00000427299 ZNF468Q5VIY5 522 aaPredicted RBP10.34□□□□□ -0.75
LINC00458-202ENST00000427299 ZNF358Q9NW07 568 aa10.34□□□□□ -0.75
LINC00458-202ENST00000427299 TXLNAP40222 546 aa10.33□□□□□ -0.76
LINC00458-202ENST00000427299 EPHA4P54764 986 aa10.33□□□□□ -0.76
LINC00458-202ENST00000427299 NCOA4Q13772 614 aa10.33□□□□□ -0.76
LINC00458-202ENST00000427299 STRN4Q9NRL3 753 aa10.33□□□□□ -0.76
LINC00458-202ENST00000427299 NOP53Q9NZM5 478 aaKnown RBP10.33□□□□□ -0.76
LINC00458-202ENST00000427299 LAMC2Q13753 1193 aa10.32□□□□□ -0.76
LINC00458-202ENST00000427299 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC00458-202ENST00000427299 GJA3Q9Y6H8 435 aa10.32□□□□□ -0.76
LINC00458-202ENST00000427299 C1QTNF9BB2RNN3 333 aa10.31□□□□□ -0.76
LINC00458-202ENST00000427299 PCBP4P57723 403 aaKnown RBP10.31□□□□□ -0.76
LINC00458-202ENST00000427299 TEAD4Q15561 434 aa10.31□□□□□ -0.76
LINC00458-202ENST00000427299 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
LINC00458-202ENST00000427299 CD163Q86VB7 1156 aa10.31□□□□□ -0.76
LINC00458-202ENST00000427299 USP17L5A8MUK1 530 aa10.3□□□□□ -0.76
LINC00458-202ENST00000427299 PSME1Q06323 249 aa10.3□□□□□ -0.76
LINC00458-202ENST00000427299 L3MBTL2Q969R5 705 aa10.3□□□□□ -0.76
LINC00458-202ENST00000427299 POM121Q96HA1 1249 aa10.3□□□□□ -0.76
LINC00458-202ENST00000427299 MARK1Q9P0L2 795 aa10.3□□□□□ -0.76
LINC00458-202ENST00000427299 EML1O00423 815 aa10.29□□□□□ -0.76
LINC00458-202ENST00000427299 FURINP09958 794 aa10.29□□□□□ -0.76
LINC00458-202ENST00000427299 C7orf43Q8WVR3 580 aa10.29□□□□□ -0.76
LINC00458-202ENST00000427299 PRR12Q9ULL5 1215 aa10.29□□□□□ -0.76
LINC00458-202ENST00000427299 NOS2P35228 1153 aa10.28□□□□□ -0.76
LINC00458-202ENST00000427299 CHRNA4P43681 627 aa10.28□□□□□ -0.76
LINC00458-202ENST00000427299 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
LINC00458-202ENST00000427299 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
LINC00458-202ENST00000427299 TRIM11Q96F44 468 aa10.28□□□□□ -0.76
LINC00458-202ENST00000427299 MDFIQ99750 246 aa10.28□□□□□ -0.76
LINC00458-202ENST00000427299 GPC6Q9Y625 555 aaPredicted RBP10.27□□□□□ -0.77
LINC00458-202ENST00000427299 TBCELQ5QJ74 424 aa10.26□□□□□ -0.77
LINC00458-202ENST00000427299 LRRC69Q6ZNQ3 347 aa10.26□□□□□ -0.77
LINC00458-202ENST00000427299 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
LINC00458-202ENST00000427299 TNS4Q8IZW8 715 aa10.26□□□□□ -0.77
LINC00458-202ENST00000427299 ELOA3CA0A087WX78 387 aaPredicted RBP10.25□□□□□ -0.77
LINC00458-202ENST00000427299 ELOA3DA6NLF2 546 aaPredicted RBP10.25□□□□□ -0.77
LINC00458-202ENST00000427299 ELOA3BQ3SY89 546 aa10.25□□□□□ -0.77
LINC00458-202ENST00000427299 ELOA3Q8NG57 546 aa10.25□□□□□ -0.77
LINC00458-202ENST00000427299 ADAMTS19Q8TE59 1207 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms