RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
C9orf3-205ENST00000427193 CNTNAP5Q8WYK1 1306 aa10.83□□□□□ -0.68
C9orf3-205ENST00000427193 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
C9orf3-205ENST00000427193 BMP4P12644 408 aa10.82□□□□□ -0.68
C9orf3-205ENST00000427193 GOLGA6L1Q8N7Z2 621 aa10.82□□□□□ -0.68
C9orf3-205ENST00000427193 ZDHHC3Q9NYG2 299 aa10.82□□□□□ -0.68
C9orf3-205ENST00000427193 PCDHGC4Q9Y5F7 938 aa10.82□□□□□ -0.68
C9orf3-205ENST00000427193 USP17L5A8MUK1 530 aa10.81□□□□□ -0.68
C9orf3-205ENST00000427193 ZCCHC2Q9C0B9 1178 aaKnown RBP10.81□□□□□ -0.68
C9orf3-205ENST00000427193 IGHA1P01876 353 aa10.8□□□□□ -0.68
C9orf3-205ENST00000427193 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
C9orf3-205ENST00000427193 PSME1Q06323 249 aa10.8□□□□□ -0.68
C9orf3-205ENST00000427193 GALNT6Q8NCL4 622 aa10.8□□□□□ -0.68
C9orf3-205ENST00000427193 CABP1Q9NZU7 370 aa10.8□□□□□ -0.68
C9orf3-205ENST00000427193 USP3Q9Y6I4 520 aa10.8□□□□□ -0.68
C9orf3-205ENST00000427193 C2CD2LO14523 706 aa10.79□□□□□ -0.68
C9orf3-205ENST00000427193 ZNF358Q9NW07 568 aa10.79□□□□□ -0.68
C9orf3-205ENST00000427193 A0A1W2PNR3 127 aa10.78□□□□□ -0.68
C9orf3-205ENST00000427193 POM121CA8CG34 1229 aa10.78□□□□□ -0.68
C9orf3-205ENST00000427193 ATXN7O15265 892 aaPredicted RBP10.78□□□□□ -0.68
C9orf3-205ENST00000427193 CTBSQ01459 385 aa10.78□□□□□ -0.68
C9orf3-205ENST00000427193 ARSJQ5FYB0 599 aaPredicted RBP10.78□□□□□ -0.68
C9orf3-205ENST00000427193 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
C9orf3-205ENST00000427193 EDARADDQ8WWZ3 215 aa10.78□□□□□ -0.68
C9orf3-205ENST00000427193 SCHIP1Q9P0W5 487 aaPredicted RBP10.78□□□□□ -0.68
C9orf3-205ENST00000427193 SHISA8B8ZZ34 492 aa10.77□□□□□ -0.69
C9orf3-205ENST00000427193 GPAT2Q6NUI2 795 aa10.77□□□□□ -0.69
C9orf3-205ENST00000427193 SLCO4C1Q6ZQN7 724 aa10.77□□□□□ -0.69
C9orf3-205ENST00000427193 C1orf229Q6ZS94 237 aaPredicted RBP10.77□□□□□ -0.69
C9orf3-205ENST00000427193 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
C9orf3-205ENST00000427193 DEPDC4Q8N2C3 294 aa10.77□□□□□ -0.69
C9orf3-205ENST00000427193 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.77□□□□□ -0.69
C9orf3-205ENST00000427193 ADAMTS19Q8TE59 1207 aa10.77□□□□□ -0.69
C9orf3-205ENST00000427193 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
C9orf3-205ENST00000427193 ARAFP10398 606 aa10.75□□□□□ -0.69
C9orf3-205ENST00000427193 FAM182BQ5T319 152 aa10.75□□□□□ -0.69
C9orf3-205ENST00000427193 ZIC5Q96T25 663 aa10.75□□□□□ -0.69
C9orf3-205ENST00000427193 GGA1Q9UJY5 639 aa10.75□□□□□ -0.69
C9orf3-205ENST00000427193 MKL2Q9ULH7 1088 aa10.75□□□□□ -0.69
C9orf3-205ENST00000427193 MAPTP10636 758 aaKnown RBP10.74□□□□□ -0.69
C9orf3-205ENST00000427193 ATP1A2P50993 1020 aa10.74□□□□□ -0.69
C9orf3-205ENST00000427193 EPHA4P54764 986 aa10.74□□□□□ -0.69
C9orf3-205ENST00000427193 TNP2Q05952 138 aa10.74□□□□□ -0.69
C9orf3-205ENST00000427193 TEAD4Q15561 434 aa10.74□□□□□ -0.69
C9orf3-205ENST00000427193 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
C9orf3-205ENST00000427193 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
C9orf3-205ENST00000427193 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 USP17L3A6NCW0 530 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 USP17L4A6NCW7 530 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 ATP9BO43861 1147 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 FAM157BP0CG42 384 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 SNRPNP63162 240 aaKnown RBP10.73□□□□□ -0.69
C9orf3-205ENST00000427193 SAMD5Q5TGI4 173 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 USP17L1Q7RTZ2 530 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
C9orf3-205ENST00000427193 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
C9orf3-205ENST00000427193 BICDL1Q6ZP65 573 aa10.72□□□□□ -0.69
C9orf3-205ENST00000427193 ZDHHC1Q8WTX9 485 aa10.72□□□□□ -0.69
C9orf3-205ENST00000427193 PARP3Q9Y6F1 533 aa10.72□□□□□ -0.69
C9orf3-205ENST00000427193 SHROOM4Q9ULL8 1493 aa10.72□□□□□ -0.69
C9orf3-205ENST00000427193 KHNYNO15037 678 aaKnown RBP10.71□□□□□ -0.69
C9orf3-205ENST00000427193 EPXP11678 715 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 NOS2P35228 1153 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 TXLNAP40222 546 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 SLC9A9Q8IVB4 645 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 L3MBTL2Q969R5 705 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 RRAGCQ9HB90 399 aa10.71□□□□□ -0.69
C9orf3-205ENST00000427193 AVENQ9NQS1 362 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-205ENST00000427193 ZBTB7BO15156 539 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-205ENST00000427193 AMPD1P23109 780 aa10.7□□□□□ -0.7
C9orf3-205ENST00000427193 SUZ12Q15022 739 aaKnown RBP10.7□□□□□ -0.7
C9orf3-205ENST00000427193 PLA2G4EQ3MJ16 856 aa10.7□□□□□ -0.7
C9orf3-205ENST00000427193 CCDC102BQ68D86 513 aa10.7□□□□□ -0.7
C9orf3-205ENST00000427193 ALYREFQ86V81 257 aaKnown RBP10.7□□□□□ -0.7
C9orf3-205ENST00000427193 GPC6Q9Y625 555 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-205ENST00000427193 NEURL1BA8MQ27 555 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 EML1O00423 815 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 CD33P20138 364 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 ADH6P28332 368 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 CLDN10P78369 228 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 LAMC2Q13753 1193 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 TNS4Q8IZW8 715 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 HCN2Q9UL51 889 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
C9orf3-205ENST00000427193 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
C9orf3-205ENST00000427193 M0R2N6 131 aa10.68□□□□□ -0.7
C9orf3-205ENST00000427193 PIK3R2O00459 728 aa10.68□□□□□ -0.7
C9orf3-205ENST00000427193 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
C9orf3-205ENST00000427193 ZNF232Q9UNY5 417 aa10.68□□□□□ -0.7
C9orf3-205ENST00000427193 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
C9orf3-205ENST00000427193 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-205ENST00000427193 EFSO43281 561 aa10.67□□□□□ -0.7
C9orf3-205ENST00000427193 HOXB4P17483 251 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-205ENST00000427193 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
C9orf3-205ENST00000427193 BTBD6Q96KE9 485 aa10.67□□□□□ -0.7
C9orf3-205ENST00000427193 MARK1Q9P0L2 795 aa10.67□□□□□ -0.7
C9orf3-205ENST00000427193 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms