RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
AFF3-208ENST00000427118 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
AFF3-208ENST00000427118 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
AFF3-208ENST00000427118 HTATSF1O43719 755 aaKnown RBP20.96■□□□□ 0.95
AFF3-208ENST00000427118 MMP10P09238 476 aa20.96■□□□□ 0.95
AFF3-208ENST00000427118 RFC4P35249 363 aa20.96■□□□□ 0.95
AFF3-208ENST00000427118 NFE2L2Q16236 605 aa20.96■□□□□ 0.95
AFF3-208ENST00000427118 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
AFF3-208ENST00000427118 ZBTB1Q9Y2K1 713 aa20.96■□□□□ 0.95
AFF3-208ENST00000427118 SOS1Q07889 1333 aaPredicted RBP20.96■□□□□ 0.95
AFF3-208ENST00000427118 DCAF8L1A6NGE4 600 aa20.95■□□□□ 0.94
AFF3-208ENST00000427118 RTF1Q92541 710 aaKnown RBP20.95■□□□□ 0.94
AFF3-208ENST00000427118 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
AFF3-208ENST00000427118 BTBD11A6QL63 1104 aa20.94■□□□□ 0.94
AFF3-208ENST00000427118 CCDC146Q8IYE0 955 aa20.94■□□□□ 0.94
AFF3-208ENST00000427118 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
AFF3-208ENST00000427118 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
AFF3-208ENST00000427118 USP42Q9H9J4 1324 aaKnown RBP20.93■□□□□ 0.94
AFF3-208ENST00000427118 FKBP8Q14318 412 aa20.92■□□□□ 0.94
AFF3-208ENST00000427118 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
AFF3-208ENST00000427118 CD2APQ9Y5K6 639 aa20.92■□□□□ 0.94
AFF3-208ENST00000427118 PRAMEF22A3QJZ6 481 aa20.91■□□□□ 0.94
AFF3-208ENST00000427118 CANXP27824 592 aaKnown RBP20.91■□□□□ 0.94
AFF3-208ENST00000427118 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
AFF3-208ENST00000427118 GPR162Q16538 588 aa20.91■□□□□ 0.94
AFF3-208ENST00000427118 MIS18AQ9NYP9 233 aa20.91■□□□□ 0.94
AFF3-208ENST00000427118 WWC3Q9ULE0 1092 aa20.91■□□□□ 0.94
AFF3-208ENST00000427118 CHD4Q14839 1912 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 KIF13BQ9NQT8 1826 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 COL15A1P39059 1388 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 YBX3P16989 372 aaKnown RBP eCLIP20.9■□□□□ 0.94
AFF3-208ENST00000427118 YY1P25490 414 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 RIPK4P57078 832 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 FMNL2Q96PY5 1086 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 KIAA1551Q9HCM1 1747 aa20.9■□□□□ 0.94
AFF3-208ENST00000427118 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.93
AFF3-208ENST00000427118 USPL1Q5W0Q7 1092 aa20.89■□□□□ 0.93
AFF3-208ENST00000427118 N4BP2Q86UW6 1770 aaPredicted RBP20.89■□□□□ 0.93
AFF3-208ENST00000427118 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
AFF3-208ENST00000427118 A1BGP04217 495 aa20.88■□□□□ 0.93
AFF3-208ENST00000427118 DDR1Q08345 913 aa20.88■□□□□ 0.93
AFF3-208ENST00000427118 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
AFF3-208ENST00000427118 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
AFF3-208ENST00000427118 STARD3NLO95772 234 aa20.87■□□□□ 0.93
AFF3-208ENST00000427118 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
AFF3-208ENST00000427118 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
AFF3-208ENST00000427118 EIF5P55010 431 aaKnown RBP20.86■□□□□ 0.93
AFF3-208ENST00000427118 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
AFF3-208ENST00000427118 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
AFF3-208ENST00000427118 C10orf71Q711Q0 1435 aa20.86■□□□□ 0.93
AFF3-208ENST00000427118 ZPR1O75312 459 aa20.85■□□□□ 0.93
AFF3-208ENST00000427118 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
AFF3-208ENST00000427118 NARFQ9UHQ1 456 aa20.85■□□□□ 0.93
AFF3-208ENST00000427118 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
AFF3-208ENST00000427118 PARP3Q9Y6F1 533 aa20.85■□□□□ 0.93
AFF3-208ENST00000427118 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
AFF3-208ENST00000427118 AFDNP55196 1824 aaKnown RBP20.84■□□□□ 0.93
AFF3-208ENST00000427118 APAF1O14727 1248 aa20.84■□□□□ 0.93
AFF3-208ENST00000427118 TM4SF1P30408 202 aa20.83■□□□□ 0.93
AFF3-208ENST00000427118 TEX13AQ9BXU3 409 aaPredicted RBP20.83■□□□□ 0.93
AFF3-208ENST00000427118 ZNF330Q9Y3S2 320 aaPredicted RBP20.83■□□□□ 0.93
AFF3-208ENST00000427118 SCN7AQ01118 1682 aa20.83■□□□□ 0.92
AFF3-208ENST00000427118 POLRMTO00411 1230 aaKnown RBP20.82■□□□□ 0.92
AFF3-208ENST00000427118 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
AFF3-208ENST00000427118 NFIXQ14938 502 aa20.81■□□□□ 0.92
AFF3-208ENST00000427118 TBC1D2BQ9UPU7 963 aa20.81■□□□□ 0.92
AFF3-208ENST00000427118 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
AFF3-208ENST00000427118 A0A0G2JLW4 131 aa20.8■□□□□ 0.92
AFF3-208ENST00000427118 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
AFF3-208ENST00000427118 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
AFF3-208ENST00000427118 BRCA1P38398 1863 aaKnown RBP20.79■□□□□ 0.92
AFF3-208ENST00000427118 BCORQ6W2J9 1755 aa20.79■□□□□ 0.92
AFF3-208ENST00000427118 NRXN2Q9P2S2 1712 aa20.78■□□□□ 0.92
AFF3-208ENST00000427118 NBPF26B4DH59 902 aa20.78■□□□□ 0.92
AFF3-208ENST00000427118 DPEP1P16444 411 aa20.78■□□□□ 0.92
AFF3-208ENST00000427118 IL6STP40189 918 aaPredicted RBP20.78■□□□□ 0.92
AFF3-208ENST00000427118 NBPF10Q6P3W6 841 aaKnown RBP20.78■□□□□ 0.92
AFF3-208ENST00000427118 NBPF15Q8N660 670 aa20.78■□□□□ 0.92
AFF3-208ENST00000427118 A0A087WZG4 1122 aa20.77■□□□□ 0.92
AFF3-208ENST00000427118 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
AFF3-208ENST00000427118 BICDL1Q6ZP65 573 aa20.77■□□□□ 0.92
AFF3-208ENST00000427118 SALL2Q9Y467 1007 aaPredicted RBP20.77■□□□□ 0.92
AFF3-208ENST00000427118 CAMTA2O94983 1202 aa20.76■□□□□ 0.91
AFF3-208ENST00000427118 TBC1D9BQ66K14 1250 aa20.76■□□□□ 0.91
AFF3-208ENST00000427118 BABAM1Q9NWV8 329 aa20.76■□□□□ 0.91
AFF3-208ENST00000427118 GRIN3BO60391 1043 aa20.75■□□□□ 0.91
AFF3-208ENST00000427118 KCNA3P22001 575 aa20.75■□□□□ 0.91
AFF3-208ENST00000427118 TGFB2P61812 414 aa20.75■□□□□ 0.91
AFF3-208ENST00000427118 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
AFF3-208ENST00000427118 GIGYF1O75420 1035 aaPredicted RBP20.74■□□□□ 0.91
AFF3-208ENST00000427118 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
AFF3-208ENST00000427118 CCDC27Q2M243 656 aa20.74■□□□□ 0.91
AFF3-208ENST00000427118 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
AFF3-208ENST00000427118 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
AFF3-208ENST00000427118 SERPINB2P05120 415 aa20.73■□□□□ 0.91
AFF3-208ENST00000427118 CHRNA5P30532 468 aa20.73■□□□□ 0.91
AFF3-208ENST00000427118 DZIP3Q86Y13 1208 aaKnown RBP20.73■□□□□ 0.91
AFF3-208ENST00000427118 ZNF784Q8NCA9 323 aaPredicted RBP20.73■□□□□ 0.91
AFF3-208ENST00000427118 ANKRD31Q8N7Z5 1873 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms