RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 CHD4Q14839 1912 aa29.27■■■□□ 2.28
SEMA3F-205ENST00000426511 COL15A1P39059 1388 aa29.26■■■□□ 2.28
SEMA3F-205ENST00000426511 GOLGB1Q14789 3259 aaKnown RBP29.26■■■□□ 2.27
SEMA3F-205ENST00000426511 GRIN3BO60391 1043 aa29.26■■■□□ 2.27
SEMA3F-205ENST00000426511 USPL1Q5W0Q7 1092 aa29.26■■■□□ 2.27
SEMA3F-205ENST00000426511 ZNF330Q9Y3S2 320 aaPredicted RBP29.26■■■□□ 2.27
SEMA3F-205ENST00000426511 MAPK8IP3Q9UPT6 1336 aa29.24■■■□□ 2.27
SEMA3F-205ENST00000426511 TEX13AQ9BXU3 409 aaPredicted RBP29.23■■■□□ 2.27
SEMA3F-205ENST00000426511 MYBBP1AQ9BQG0 1328 aaKnown RBP29.22■■■□□ 2.27
SEMA3F-205ENST00000426511 HTATSF1O43719 755 aaKnown RBP29.22■■■□□ 2.27
SEMA3F-205ENST00000426511 PNNQ9H307 717 aaKnown RBP29.22■■■□□ 2.27
SEMA3F-205ENST00000426511 PLEKHF1Q96S99 279 aa29.21■■■□□ 2.27
SEMA3F-205ENST00000426511 C10orf71Q711Q0 1435 aa29.2■■■□□ 2.27
SEMA3F-205ENST00000426511 DDR1Q08345 913 aa29.2■■■□□ 2.26
SEMA3F-205ENST00000426511 NARFQ9UHQ1 456 aa29.2■■■□□ 2.26
SEMA3F-205ENST00000426511 A0A0G2JLW4 131 aa29.19■■■□□ 2.26
SEMA3F-205ENST00000426511 NFE2L2Q16236 605 aa29.19■■■□□ 2.26
SEMA3F-205ENST00000426511 PXDNLA1KZ92 1463 aa29.18■■■□□ 2.26
SEMA3F-205ENST00000426511 ZNF784Q8NCA9 323 aaPredicted RBP29.18■■■□□ 2.26
SEMA3F-205ENST00000426511 MIS18AQ9NYP9 233 aa29.18■■■□□ 2.26
SEMA3F-205ENST00000426511 N4BP2Q86UW6 1770 aaPredicted RBP29.17■■■□□ 2.26
SEMA3F-205ENST00000426511 A1BGP04217 495 aa29.17■■■□□ 2.26
SEMA3F-205ENST00000426511 ZEB1P37275 1124 aaPredicted RBP29.17■■■□□ 2.26
SEMA3F-205ENST00000426511 TAF7Q15545 349 aaPredicted RBP29.17■■■□□ 2.26
SEMA3F-205ENST00000426511 NPM2Q86SE8 214 aaKnown RBP29.17■■■□□ 2.26
SEMA3F-205ENST00000426511 DLG5Q8TDM6 1919 aa29.17■■■□□ 2.26
SEMA3F-205ENST00000426511 TGFB2P61812 414 aa29.16■■■□□ 2.26
SEMA3F-205ENST00000426511 KIF13BQ9NQT8 1826 aa29.15■■■□□ 2.26
SEMA3F-205ENST00000426511 A0A087WZG4 1122 aa29.15■■■□□ 2.26
SEMA3F-205ENST00000426511 PRAMEF22A3QJZ6 481 aa29.15■■■□□ 2.26
SEMA3F-205ENST00000426511 EIF5P55010 431 aaKnown RBP29.15■■■□□ 2.26
SEMA3F-205ENST00000426511 THUMPD2Q9BTF0 503 aaKnown RBP29.15■■■□□ 2.26
SEMA3F-205ENST00000426511 POLRMTO00411 1230 aaKnown RBP29.14■■■□□ 2.26
SEMA3F-205ENST00000426511 DPEP1P16444 411 aa29.14■■■□□ 2.26
SEMA3F-205ENST00000426511 TM4SF1P30408 202 aa29.14■■■□□ 2.26
SEMA3F-205ENST00000426511 PIP4K2AP48426 406 aaPredicted RBP29.14■■■□□ 2.26
SEMA3F-205ENST00000426511 BICDL1Q6ZP65 573 aa29.14■■■□□ 2.26
SEMA3F-205ENST00000426511 USP16Q9Y5T5 823 aa29.14■■■□□ 2.26
SEMA3F-205ENST00000426511 SNRPA1P09661 255 aaKnown RBP29.13■■■□□ 2.25
SEMA3F-205ENST00000426511 NFIXQ14938 502 aa29.13■■■□□ 2.25
SEMA3F-205ENST00000426511 BCL2L12Q9HB09 334 aa29.13■■■□□ 2.25
SEMA3F-205ENST00000426511 TBC1D2BQ9UPU7 963 aa29.13■■■□□ 2.25
SEMA3F-205ENST00000426511 BCS1LQ9Y276 419 aa29.13■■■□□ 2.25
SEMA3F-205ENST00000426511 KIAA1551Q9HCM1 1747 aa29.11■■■□□ 2.25
SEMA3F-205ENST00000426511 IL6STP40189 918 aaPredicted RBP29.11■■■□□ 2.25
SEMA3F-205ENST00000426511 WDR43Q15061 677 aaKnown RBP eCLIP29.11■■■□□ 2.25
SEMA3F-205ENST00000426511 CCDC146Q8IYE0 955 aa29.1■■■□□ 2.25
SEMA3F-205ENST00000426511 RIPK4P57078 832 aa29.08■■■□□ 2.25
SEMA3F-205ENST00000426511 PNISRQ8TF01 805 aaKnown RBP29.08■■■□□ 2.25
SEMA3F-205ENST00000426511 PRKRIP1Q9H875 184 aaPredicted RBP29.08■■■□□ 2.25
SEMA3F-205ENST00000426511 SERPINB2P05120 415 aa29.07■■■□□ 2.24
SEMA3F-205ENST00000426511 CHRNA5P30532 468 aa29.06■■■□□ 2.24
SEMA3F-205ENST00000426511 RRP7AQ9Y3A4 280 aaKnown RBP29.06■■■□□ 2.24
SEMA3F-205ENST00000426511 NEUROD2Q15784 382 aa29.05■■■□□ 2.24
SEMA3F-205ENST00000426511 TBC1D9BQ66K14 1250 aa29.05■■■□□ 2.24
SEMA3F-205ENST00000426511 DZIP3Q86Y13 1208 aaKnown RBP29.05■■■□□ 2.24
SEMA3F-205ENST00000426511 SCN7AQ01118 1682 aa29.04■■■□□ 2.24
SEMA3F-205ENST00000426511 AFDNP55196 1824 aaKnown RBP29.04■■■□□ 2.24
SEMA3F-205ENST00000426511 TMPOP42166 694 aaKnown RBP29.03■■■□□ 2.24
SEMA3F-205ENST00000426511 PIM2Q9P1W9 311 aa29.03■■■□□ 2.24
SEMA3F-205ENST00000426511 KCNA3P22001 575 aa29.02■■■□□ 2.24
SEMA3F-205ENST00000426511 KDM3BQ7LBC6 1761 aa29.02■■■□□ 2.24
SEMA3F-205ENST00000426511 CAMTA2O94983 1202 aa29.01■■■□□ 2.23
SEMA3F-205ENST00000426511 ARHGAP27Q6ZUM4 889 aa29.01■■■□□ 2.23
SEMA3F-205ENST00000426511 NPHP1O15259 732 aa29■■■□□ 2.23
SEMA3F-205ENST00000426511 LMOD3Q0VAK6 560 aa29■■■□□ 2.23
SEMA3F-205ENST00000426511 TSPYL4Q9UJ04 414 aa29■■■□□ 2.23
SEMA3F-205ENST00000426511 NBPF26B4DH59 902 aa28.99■■■□□ 2.23
SEMA3F-205ENST00000426511 EIF4A1P60842 406 aaKnown RBP28.99■■■□□ 2.23
SEMA3F-205ENST00000426511 DALRD3Q5D0E6 543 aaKnown RBP28.99■■■□□ 2.23
SEMA3F-205ENST00000426511 NBPF10Q6P3W6 841 aaKnown RBP28.99■■■□□ 2.23
SEMA3F-205ENST00000426511 NBPF15Q8N660 670 aa28.99■■■□□ 2.23
SEMA3F-205ENST00000426511 ADAMTS8Q9UP79 889 aa28.99■■■□□ 2.23
SEMA3F-205ENST00000426511 CCDC24Q8N4L8 307 aa28.98■■■□□ 2.23
SEMA3F-205ENST00000426511 NGEFQ8N5V2 710 aa28.98■■■□□ 2.23
SEMA3F-205ENST00000426511 RUNDC1Q96C34 613 aa28.98■■■□□ 2.23
SEMA3F-205ENST00000426511 SETDB2Q96T68 719 aa28.98■■■□□ 2.23
SEMA3F-205ENST00000426511 LAMB4A4D0S4 1761 aa28.98■■■□□ 2.23
SEMA3F-205ENST00000426511 BRCA1P38398 1863 aaKnown RBP28.97■■■□□ 2.23
SEMA3F-205ENST00000426511 NRXN2Q9P2S2 1712 aa28.97■■■□□ 2.23
SEMA3F-205ENST00000426511 ATP10DQ9P241 1426 aa28.97■■■□□ 2.23
SEMA3F-205ENST00000426511 GIGYF1O75420 1035 aaPredicted RBP28.97■■■□□ 2.23
SEMA3F-205ENST00000426511 CARMIL3Q8ND23 1372 aa28.97■■■□□ 2.23
SEMA3F-205ENST00000426511 ZNF526Q8TF50 670 aaPredicted RBP28.96■■■□□ 2.23
SEMA3F-205ENST00000426511 BCORQ6W2J9 1755 aa28.96■■■□□ 2.23
SEMA3F-205ENST00000426511 C2CD5Q86YS7 1000 aa28.94■■■□□ 2.22
SEMA3F-205ENST00000426511 ZNF652Q9Y2D9 606 aa28.94■■■□□ 2.22
SEMA3F-205ENST00000426511 LAS1LQ9Y4W2 734 aaKnown RBP28.93■■■□□ 2.22
SEMA3F-205ENST00000426511 MYL6BP14649 208 aa28.92■■■□□ 2.22
SEMA3F-205ENST00000426511 PRR5LQ6MZQ0 368 aa28.92■■■□□ 2.22
SEMA3F-205ENST00000426511 CNBD1Q8NA66 436 aa28.92■■■□□ 2.22
SEMA3F-205ENST00000426511 H0YIN7 160 aa28.91■■■□□ 2.22
SEMA3F-205ENST00000426511 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
SEMA3F-205ENST00000426511 ARFGEF1Q9Y6D6 1849 aa28.9■■■□□ 2.22
SEMA3F-205ENST00000426511 ADCY9O60503 1353 aa28.89■■■□□ 2.22
SEMA3F-205ENST00000426511 ST5P78524 1137 aa28.89■■■□□ 2.22
SEMA3F-205ENST00000426511 FAM177BA6PVY3 158 aa28.88■■■□□ 2.21
SEMA3F-205ENST00000426511 EIF2S2P20042 333 aaKnown RBP28.88■■■□□ 2.21
SEMA3F-205ENST00000426511 CLEC4GQ6UXB4 293 aa28.88■■■□□ 2.21
SEMA3F-205ENST00000426511 NBPF5PQ86XG9 351 aaPredicted RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms