RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 FMNL2Q96PY5 1086 aa31.5■■■□□ 2.63
VDAC1-204ENST00000425992 COL15A1P39059 1388 aa31.49■■■□□ 2.63
VDAC1-204ENST00000425992 NFE2L2Q16236 605 aa31.48■■■□□ 2.63
VDAC1-204ENST00000425992 PNNQ9H307 717 aaKnown RBP31.48■■■□□ 2.63
VDAC1-204ENST00000425992 KIAA1551Q9HCM1 1747 aa31.47■■■□□ 2.63
VDAC1-204ENST00000425992 STARD3NLO95772 234 aa31.47■■■□□ 2.63
VDAC1-204ENST00000425992 FKBP8Q14318 412 aa31.47■■■□□ 2.63
VDAC1-204ENST00000425992 PRKRIP1Q9H875 184 aaPredicted RBP31.47■■■□□ 2.63
VDAC1-204ENST00000425992 MAPK8IP3Q9UPT6 1336 aa31.47■■■□□ 2.63
VDAC1-204ENST00000425992 CANXP27824 592 aaKnown RBP31.46■■■□□ 2.63
VDAC1-204ENST00000425992 KDM3BQ7LBC6 1761 aa31.45■■■□□ 2.63
VDAC1-204ENST00000425992 N4BP2Q86UW6 1770 aaPredicted RBP31.45■■■□□ 2.63
VDAC1-204ENST00000425992 YBX3P16989 372 aaKnown RBP eCLIP31.45■■■□□ 2.632e-9■□□□□ 9.6
VDAC1-204ENST00000425992 TEX13AQ9BXU3 409 aaPredicted RBP31.45■■■□□ 2.63
VDAC1-204ENST00000425992 USPL1Q5W0Q7 1092 aa31.44■■■□□ 2.62
VDAC1-204ENST00000425992 ZPR1O75312 459 aa31.43■■■□□ 2.62
VDAC1-204ENST00000425992 PARP3Q9Y6F1 533 aa31.43■■■□□ 2.62
VDAC1-204ENST00000425992 TAF7Q15545 349 aaPredicted RBP31.42■■■□□ 2.62
VDAC1-204ENST00000425992 C10orf71Q711Q0 1435 aa31.41■■■□□ 2.62
VDAC1-204ENST00000425992 NARFQ9UHQ1 456 aa31.41■■■□□ 2.62
VDAC1-204ENST00000425992 EIF5P55010 431 aaKnown RBP31.4■■■□□ 2.62
VDAC1-204ENST00000425992 THUMPD2Q9BTF0 503 aaKnown RBP31.4■■■□□ 2.62
VDAC1-204ENST00000425992 MIS18AQ9NYP9 233 aa31.4■■■□□ 2.62
VDAC1-204ENST00000425992 AFDNP55196 1824 aaKnown RBP31.4■■■□□ 2.62
VDAC1-204ENST00000425992 PRAMEF22A3QJZ6 481 aa31.39■■■□□ 2.62
VDAC1-204ENST00000425992 A1BGP04217 495 aa31.39■■■□□ 2.62
VDAC1-204ENST00000425992 DDR1Q08345 913 aa31.39■■■□□ 2.62
VDAC1-204ENST00000425992 SCN7AQ01118 1682 aa31.38■■■□□ 2.61
VDAC1-204ENST00000425992 USP16Q9Y5T5 823 aa31.38■■■□□ 2.61
VDAC1-204ENST00000425992 PXDNLA1KZ92 1463 aa31.38■■■□□ 2.61
VDAC1-204ENST00000425992 LAMB4A4D0S4 1761 aa31.38■■■□□ 2.61
VDAC1-204ENST00000425992 TM4SF1P30408 202 aa31.37■■■□□ 2.61
VDAC1-204ENST00000425992 BCL2L12Q9HB09 334 aa31.37■■■□□ 2.61
VDAC1-204ENST00000425992 WWC3Q9ULE0 1092 aa31.36■■■□□ 2.61
VDAC1-204ENST00000425992 SNRPA1P09661 255 aaKnown RBP31.35■■■□□ 2.61
VDAC1-204ENST00000425992 CCDC146Q8IYE0 955 aa31.35■■■□□ 2.61
VDAC1-204ENST00000425992 BRCA1P38398 1863 aaKnown RBP31.35■■■□□ 2.61
VDAC1-204ENST00000425992 POLRMTO00411 1230 aaKnown RBP31.34■■■□□ 2.61
VDAC1-204ENST00000425992 IL6STP40189 918 aaPredicted RBP31.34■■■□□ 2.61
VDAC1-204ENST00000425992 WDR43Q15061 677 aaKnown RBP eCLIP31.34■■■□□ 2.61
VDAC1-204ENST00000425992 ZNF330Q9Y3S2 320 aaPredicted RBP31.34■■■□□ 2.61
VDAC1-204ENST00000425992 NRXN2Q9P2S2 1712 aa31.34■■■□□ 2.61
VDAC1-204ENST00000425992 BCORQ6W2J9 1755 aa31.33■■■□□ 2.61
VDAC1-204ENST00000425992 A0A087WZG4 1122 aa31.33■■■□□ 2.61
VDAC1-204ENST00000425992 GRIN3BO60391 1043 aa31.33■■■□□ 2.61
VDAC1-204ENST00000425992 TMPOP42166 694 aaKnown RBP31.33■■■□□ 2.61
VDAC1-204ENST00000425992 RIPK4P57078 832 aa31.33■■■□□ 2.61
VDAC1-204ENST00000425992 TGFB2P61812 414 aa31.32■■■□□ 2.6
VDAC1-204ENST00000425992 NFIXQ14938 502 aa31.32■■■□□ 2.6
VDAC1-204ENST00000425992 PNISRQ8TF01 805 aaKnown RBP31.32■■■□□ 2.6
VDAC1-204ENST00000425992 ZNF316A6NFI3 1004 aaPredicted RBP31.31■■■□□ 2.6
VDAC1-204ENST00000425992 PIP4K2AP48426 406 aaPredicted RBP31.31■■■□□ 2.6
VDAC1-204ENST00000425992 ADAMTS8Q9UP79 889 aa31.31■■■□□ 2.6
VDAC1-204ENST00000425992 A0A0G2JLW4 131 aa31.3■■■□□ 2.6
VDAC1-204ENST00000425992 TBC1D2BQ9UPU7 963 aa31.3■■■□□ 2.6
VDAC1-204ENST00000425992 RRP7AQ9Y3A4 280 aaKnown RBP31.29■■■□□ 2.6
VDAC1-204ENST00000425992 RUNDC1Q96C34 613 aa31.28■■■□□ 2.6
VDAC1-204ENST00000425992 DPEP1P16444 411 aa31.27■■■□□ 2.6
VDAC1-204ENST00000425992 EIF4A1P60842 406 aaKnown RBP31.26■■■□□ 2.59
VDAC1-204ENST00000425992 NEUROD2Q15784 382 aa31.25■■■□□ 2.59
VDAC1-204ENST00000425992 NBPF26B4DH59 902 aa31.24■■■□□ 2.59
VDAC1-204ENST00000425992 LMOD3Q0VAK6 560 aa31.24■■■□□ 2.59
VDAC1-204ENST00000425992 NBPF10Q6P3W6 841 aaKnown RBP31.24■■■□□ 2.59
VDAC1-204ENST00000425992 NPM2Q86SE8 214 aaKnown RBP31.24■■■□□ 2.59
VDAC1-204ENST00000425992 NBPF15Q8N660 670 aa31.24■■■□□ 2.59
VDAC1-204ENST00000425992 GIGYF1O75420 1035 aaPredicted RBP31.23■■■□□ 2.59
VDAC1-204ENST00000425992 CAMTA2O94983 1202 aa31.23■■■□□ 2.59
VDAC1-204ENST00000425992 TBC1D9BQ66K14 1250 aa31.23■■■□□ 2.59
VDAC1-204ENST00000425992 BICDL1Q6ZP65 573 aa31.23■■■□□ 2.59
VDAC1-204ENST00000425992 DZIP3Q86Y13 1208 aaKnown RBP31.23■■■□□ 2.59
VDAC1-204ENST00000425992 ARFGEF1Q9Y6D6 1849 aa31.22■■■□□ 2.59
VDAC1-204ENST00000425992 SERPINB2P05120 415 aa31.22■■■□□ 2.59
VDAC1-204ENST00000425992 KCNA3P22001 575 aa31.22■■■□□ 2.59
VDAC1-204ENST00000425992 ZNF784Q8NCA9 323 aaPredicted RBP31.22■■■□□ 2.59
VDAC1-204ENST00000425992 TSPYL4Q9UJ04 414 aa31.22■■■□□ 2.59
VDAC1-204ENST00000425992 DLEC1Q9Y238 1755 aa31.2■■■□□ 2.58
VDAC1-204ENST00000425992 ANKRD31Q8N7Z5 1873 aa31.19■■■□□ 2.58
VDAC1-204ENST00000425992 TRIM35Q9UPQ4 493 aa31.19■■■□□ 2.58
VDAC1-204ENST00000425992 BCS1LQ9Y276 419 aa31.19■■■□□ 2.58
VDAC1-204ENST00000425992 CHRNA5P30532 468 aa31.18■■■□□ 2.58
VDAC1-204ENST00000425992 CCDC184Q52MB2 194 aa31.17■■■□□ 2.58
VDAC1-204ENST00000425992 CARMIL3Q8ND23 1372 aa31.17■■■□□ 2.58
VDAC1-204ENST00000425992 BABAM1Q9NWV8 329 aa31.15■■■□□ 2.58
VDAC1-204ENST00000425992 PIM2Q9P1W9 311 aa31.14■■■□□ 2.58
VDAC1-204ENST00000425992 NUP98P52948 1817 aa31.12■■■□□ 2.57
VDAC1-204ENST00000425992 SETDB2Q96T68 719 aa31.12■■■□□ 2.57
VDAC1-204ENST00000425992 COL11A2P13942 1736 aaPredicted RBP31.1■■■□□ 2.57
VDAC1-204ENST00000425992 CLEC4GQ6UXB4 293 aa31.1■■■□□ 2.57
VDAC1-204ENST00000425992 CHL1O00533 1208 aa31.09■■■□□ 2.57
VDAC1-204ENST00000425992 APAF1O14727 1248 aa31.09■■■□□ 2.57
VDAC1-204ENST00000425992 DALRD3Q5D0E6 543 aaKnown RBP31.09■■■□□ 2.57
VDAC1-204ENST00000425992 PRR5LQ6MZQ0 368 aa31.09■■■□□ 2.57
VDAC1-204ENST00000425992 CCDC24Q8N4L8 307 aa31.09■■■□□ 2.57
VDAC1-204ENST00000425992 NGEFQ8N5V2 710 aa31.09■■■□□ 2.57
VDAC1-204ENST00000425992 ZNF652Q9Y2D9 606 aa31.09■■■□□ 2.57
VDAC1-204ENST00000425992 LAS1LQ9Y4W2 734 aaKnown RBP31.09■■■□□ 2.57
VDAC1-204ENST00000425992 MYL6BP14649 208 aa31.07■■■□□ 2.56
VDAC1-204ENST00000425992 ANP32CO43423 234 aa31.06■■■□□ 2.56
VDAC1-204ENST00000425992 HLFQ16534 295 aa31.06■■■□□ 2.56
VDAC1-204ENST00000425992 ARHGAP27Q6ZUM4 889 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms