RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
CDK3-201ENST00000425876 NUCB1Q02818 461 aa18.08■□□□□ 0.49
CDK3-201ENST00000425876 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.49
CDK3-201ENST00000425876 FNBP4Q8N3X1 1017 aaPredicted RBP18.08■□□□□ 0.49
CDK3-201ENST00000425876 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.49
CDK3-201ENST00000425876 USP35Q9P2H5 1018 aa18.08■□□□□ 0.49
CDK3-201ENST00000425876 NRAPQ86VF7 1730 aa18.08■□□□□ 0.49
CDK3-201ENST00000425876 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.08■□□□□ 0.49
CDK3-201ENST00000425876 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
CDK3-201ENST00000425876 FAM161AQ3B820 660 aa18.08■□□□□ 0.48
CDK3-201ENST00000425876 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.48
CDK3-201ENST00000425876 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.48
CDK3-201ENST00000425876 CEP85Q6P2H3 762 aa18.07■□□□□ 0.48
CDK3-201ENST00000425876 USP21Q9UK80 565 aa18.07■□□□□ 0.48
CDK3-201ENST00000425876 GNAI2P04899 355 aa18.06■□□□□ 0.48
CDK3-201ENST00000425876 PDIA6Q15084 440 aa18.06■□□□□ 0.48
CDK3-201ENST00000425876 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
CDK3-201ENST00000425876 PAPPAQ13219 1627 aa18.06■□□□□ 0.48
CDK3-201ENST00000425876 C5P01031 1676 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 ADCY9O60503 1353 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 PI4KAP2A4QPH2 592 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 PI4KAP1Q8N8J0 262 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 DCTPP1Q9H773 170 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 TNS2Q63HR2 1409 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 GLI3P10071 1580 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
CDK3-201ENST00000425876 IBTKQ9P2D0 1353 aaPredicted RBP18.05■□□□□ 0.48
CDK3-201ENST00000425876 HMMRO75330 724 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 DDX58O95786 925 aaKnown RBP18.04■□□□□ 0.48
CDK3-201ENST00000425876 PROSER3Q2NL68 480 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 BEND3Q5T5X7 828 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 ATRNO75882 1429 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 EXOC5O00471 708 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 ANXA1P04083 346 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 CHD1LQ86WJ1 897 aa18.04■□□□□ 0.48
CDK3-201ENST00000425876 ALDH1L1O75891 902 aa18.03■□□□□ 0.48
CDK3-201ENST00000425876 C8orf34Q49A92 452 aa18.03■□□□□ 0.48
CDK3-201ENST00000425876 USP44Q9H0E7 712 aa18.03■□□□□ 0.48
CDK3-201ENST00000425876 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
CDK3-201ENST00000425876 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.48
CDK3-201ENST00000425876 TOGARAM1Q9Y4F4 1720 aa18.02■□□□□ 0.48
CDK3-201ENST00000425876 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.48
CDK3-201ENST00000425876 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.48
CDK3-201ENST00000425876 USP16Q9Y5T5 823 aa18.02■□□□□ 0.48
CDK3-201ENST00000425876 SPATA31A5Q5VU36 1347 aa18.02■□□□□ 0.47
CDK3-201ENST00000425876 SPATA31A7Q8IWB4 1347 aa18.02■□□□□ 0.47
CDK3-201ENST00000425876 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
CDK3-201ENST00000425876 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
CDK3-201ENST00000425876 UBTFL1P0CB47 393 aaPredicted RBP18■□□□□ 0.47
CDK3-201ENST00000425876 BARGINQ6ZT62 677 aa18■□□□□ 0.47
CDK3-201ENST00000425876 MAP3K2Q9Y2U5 619 aa18■□□□□ 0.47
CDK3-201ENST00000425876 ANKRD45Q5TZF3 282 aa18■□□□□ 0.47
CDK3-201ENST00000425876 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
CDK3-201ENST00000425876 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
CDK3-201ENST00000425876 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
CDK3-201ENST00000425876 LINS1Q8NG48 757 aa17.99■□□□□ 0.47
CDK3-201ENST00000425876 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
CDK3-201ENST00000425876 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
CDK3-201ENST00000425876 RXRBP28702 533 aa17.98■□□□□ 0.47
CDK3-201ENST00000425876 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
CDK3-201ENST00000425876 PIGBQ92521 554 aa17.97■□□□□ 0.47
CDK3-201ENST00000425876 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
CDK3-201ENST00000425876 BCL9O00512 1426 aa17.97■□□□□ 0.47
CDK3-201ENST00000425876 RBM6P78332 1123 aaKnown RBP17.96■□□□□ 0.47
CDK3-201ENST00000425876 DDB1Q16531 1140 aa17.96■□□□□ 0.47
CDK3-201ENST00000425876 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
CDK3-201ENST00000425876 LRRFIP2Q9Y608 721 aaKnown RBP17.96■□□□□ 0.47
CDK3-201ENST00000425876 MYL6BP14649 208 aa17.96■□□□□ 0.46
CDK3-201ENST00000425876 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.46
CDK3-201ENST00000425876 UTYO14607 1347 aa17.95■□□□□ 0.46
CDK3-201ENST00000425876 AIMP1Q12904 312 aaKnown RBP17.95■□□□□ 0.46
CDK3-201ENST00000425876 VPS72Q15906 364 aa17.95■□□□□ 0.46
CDK3-201ENST00000425876 ANKRD13DQ6ZTN6 518 aa17.95■□□□□ 0.46
CDK3-201ENST00000425876 ZBTB47Q9UFB7 747 aaPredicted RBP17.95■□□□□ 0.46
CDK3-201ENST00000425876 ITGB4P16144 1822 aa17.95■□□□□ 0.46
CDK3-201ENST00000425876 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
CDK3-201ENST00000425876 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
CDK3-201ENST00000425876 SSH3Q8TE77 659 aa17.94■□□□□ 0.46
CDK3-201ENST00000425876 GJD4Q96KN9 370 aaPredicted RBP17.94■□□□□ 0.46
CDK3-201ENST00000425876 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
CDK3-201ENST00000425876 ATG3Q9NT62 314 aa17.94■□□□□ 0.46
CDK3-201ENST00000425876 NBPF7P0C2Y1 421 aaPredicted RBP17.93■□□□□ 0.46
CDK3-201ENST00000425876 ASAP1Q9ULH1 1129 aa17.93■□□□□ 0.46
CDK3-201ENST00000425876 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
CDK3-201ENST00000425876 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
CDK3-201ENST00000425876 MTX1Q13505 466 aa17.92■□□□□ 0.46
CDK3-201ENST00000425876 POLA2Q14181 598 aa17.92■□□□□ 0.46
CDK3-201ENST00000425876 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
CDK3-201ENST00000425876 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
CDK3-201ENST00000425876 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
CDK3-201ENST00000425876 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
CDK3-201ENST00000425876 C9orf78Q9NZ63 289 aaPredicted RBP17.92■□□□□ 0.46
CDK3-201ENST00000425876 PNMA6EA0A0J9YXQ4 647 aa17.91■□□□□ 0.46
CDK3-201ENST00000425876 IGKV5-2P06315 115 aa17.91■□□□□ 0.46
CDK3-201ENST00000425876 BMP2KLQ5H9B9 411 aa17.91■□□□□ 0.46
CDK3-201ENST00000425876 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms