RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 USPL1Q5W0Q7 1092 aa24.32■■□□□ 1.48
SMARCAL1-205ENST00000425815 TEX13AQ9BXU3 409 aaPredicted RBP24.32■■□□□ 1.48
SMARCAL1-205ENST00000425815 GOLGB1Q14789 3259 aaKnown RBP24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 PRAMEF22A3QJZ6 481 aa24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 TM4SF1P30408 202 aa24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 EIF5P55010 431 aaKnown RBP24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 TAF7Q15545 349 aaPredicted RBP24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 PNNQ9H307 717 aaKnown RBP24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 MIS18AQ9NYP9 233 aa24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
SMARCAL1-205ENST00000425815 NEFMP07197 916 aa24.3■■□□□ 1.48
SMARCAL1-205ENST00000425815 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
SMARCAL1-205ENST00000425815 THUMPD2Q9BTF0 503 aaKnown RBP24.3■■□□□ 1.48
SMARCAL1-205ENST00000425815 BCL2L12Q9HB09 334 aa24.3■■□□□ 1.48
SMARCAL1-205ENST00000425815 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
SMARCAL1-205ENST00000425815 A1BGP04217 495 aa24.29■■□□□ 1.48
SMARCAL1-205ENST00000425815 DDR1Q08345 913 aa24.29■■□□□ 1.48
SMARCAL1-205ENST00000425815 COL15A1P39059 1388 aa24.29■■□□□ 1.48
SMARCAL1-205ENST00000425815 ZPR1O75312 459 aa24.28■■□□□ 1.48
SMARCAL1-205ENST00000425815 PARP3Q9Y6F1 533 aa24.28■■□□□ 1.48
SMARCAL1-205ENST00000425815 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
SMARCAL1-205ENST00000425815 C4AP0C0L4 1744 aa24.27■■□□□ 1.48
SMARCAL1-205ENST00000425815 POLRMTO00411 1230 aaKnown RBP24.25■■□□□ 1.47
SMARCAL1-205ENST00000425815 ADAMTS8Q9UP79 889 aa24.25■■□□□ 1.47
SMARCAL1-205ENST00000425815 SNRPA1P09661 255 aaKnown RBP24.24■■□□□ 1.47
SMARCAL1-205ENST00000425815 TMPOP42166 694 aaKnown RBP24.24■■□□□ 1.47
SMARCAL1-205ENST00000425815 RIPK4P57078 832 aa24.24■■□□□ 1.47
SMARCAL1-205ENST00000425815 C10orf71Q711Q0 1435 aa24.24■■□□□ 1.47
SMARCAL1-205ENST00000425815 IL6STP40189 918 aaPredicted RBP24.23■■□□□ 1.47
SMARCAL1-205ENST00000425815 TGFB2P61812 414 aa24.23■■□□□ 1.47
SMARCAL1-205ENST00000425815 NFIXQ14938 502 aa24.23■■□□□ 1.47
SMARCAL1-205ENST00000425815 CCDC146Q8IYE0 955 aa24.23■■□□□ 1.47
SMARCAL1-205ENST00000425815 WWC3Q9ULE0 1092 aa24.23■■□□□ 1.47
SMARCAL1-205ENST00000425815 A0A0G2JLW4 131 aa24.22■■□□□ 1.47
SMARCAL1-205ENST00000425815 ZNF316A6NFI3 1004 aaPredicted RBP24.22■■□□□ 1.47
SMARCAL1-205ENST00000425815 GRIN3BO60391 1043 aa24.22■■□□□ 1.47
SMARCAL1-205ENST00000425815 PIP4K2AP48426 406 aaPredicted RBP24.22■■□□□ 1.47
SMARCAL1-205ENST00000425815 A0A087WZG4 1122 aa24.21■■□□□ 1.47
SMARCAL1-205ENST00000425815 PNISRQ8TF01 805 aaKnown RBP24.21■■□□□ 1.47
SMARCAL1-205ENST00000425815 TBC1D2BQ9UPU7 963 aa24.21■■□□□ 1.47
SMARCAL1-205ENST00000425815 PXDNLA1KZ92 1463 aa24.2■■□□□ 1.47
SMARCAL1-205ENST00000425815 KCNA3P22001 575 aa24.2■■□□□ 1.46
SMARCAL1-205ENST00000425815 EIF4A1P60842 406 aaKnown RBP24.2■■□□□ 1.46
SMARCAL1-205ENST00000425815 RRP7AQ9Y3A4 280 aaKnown RBP24.2■■□□□ 1.46
SMARCAL1-205ENST00000425815 NBPF26B4DH59 902 aa24.19■■□□□ 1.46
SMARCAL1-205ENST00000425815 DPEP1P16444 411 aa24.19■■□□□ 1.46
SMARCAL1-205ENST00000425815 NBPF10Q6P3W6 841 aaKnown RBP24.19■■□□□ 1.46
SMARCAL1-205ENST00000425815 NBPF15Q8N660 670 aa24.19■■□□□ 1.46
SMARCAL1-205ENST00000425815 RUNDC1Q96C34 613 aa24.19■■□□□ 1.46
SMARCAL1-205ENST00000425815 WDR43Q15061 677 aaKnown RBP eCLIP24.18■■□□□ 1.46
SMARCAL1-205ENST00000425815 ZNF330Q9Y3S2 320 aaPredicted RBP24.18■■□□□ 1.46
SMARCAL1-205ENST00000425815 GIGYF1O75420 1035 aaPredicted RBP24.17■■□□□ 1.46
SMARCAL1-205ENST00000425815 CAMTA2O94983 1202 aa24.17■■□□□ 1.46
SMARCAL1-205ENST00000425815 CCDC184Q52MB2 194 aa24.16■■□□□ 1.46
SMARCAL1-205ENST00000425815 TBC1D9BQ66K14 1250 aa24.16■■□□□ 1.46
SMARCAL1-205ENST00000425815 TRIM35Q9UPQ4 493 aa24.16■■□□□ 1.46
SMARCAL1-205ENST00000425815 DLG5Q8TDM6 1919 aa24.16■■□□□ 1.46
SMARCAL1-205ENST00000425815 SERPINB2P05120 415 aa24.15■■□□□ 1.46
SMARCAL1-205ENST00000425815 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
SMARCAL1-205ENST00000425815 ZNF784Q8NCA9 323 aaPredicted RBP24.15■■□□□ 1.46
SMARCAL1-205ENST00000425815 KIF13BQ9NQT8 1826 aa24.14■■□□□ 1.46
SMARCAL1-205ENST00000425815 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
SMARCAL1-205ENST00000425815 KIAA1551Q9HCM1 1747 aa24.13■■□□□ 1.45
SMARCAL1-205ENST00000425815 DZIP3Q86Y13 1208 aaKnown RBP24.13■■□□□ 1.45
SMARCAL1-205ENST00000425815 TSPYL4Q9UJ04 414 aa24.12■■□□□ 1.45
SMARCAL1-205ENST00000425815 CHRNA5P30532 468 aa24.11■■□□□ 1.45
SMARCAL1-205ENST00000425815 LMOD3Q0VAK6 560 aa24.11■■□□□ 1.45
SMARCAL1-205ENST00000425815 BABAM1Q9NWV8 329 aa24.11■■□□□ 1.45
SMARCAL1-205ENST00000425815 BCS1LQ9Y276 419 aa24.1■■□□□ 1.45
SMARCAL1-205ENST00000425815 CHL1O00533 1208 aa24.08■■□□□ 1.45
SMARCAL1-205ENST00000425815 NPM2Q86SE8 214 aaKnown RBP24.08■■□□□ 1.45
SMARCAL1-205ENST00000425815 KDM3BQ7LBC6 1761 aa24.08■■□□□ 1.44
SMARCAL1-205ENST00000425815 CARMIL3Q8ND23 1372 aa24.07■■□□□ 1.44
SMARCAL1-205ENST00000425815 N4BP2Q86UW6 1770 aaPredicted RBP24.07■■□□□ 1.44
SMARCAL1-205ENST00000425815 CLEC4GQ6UXB4 293 aa24.07■■□□□ 1.44
SMARCAL1-205ENST00000425815 PIM2Q9P1W9 311 aa24.07■■□□□ 1.44
SMARCAL1-205ENST00000425815 APAF1O14727 1248 aa24.06■■□□□ 1.44
SMARCAL1-205ENST00000425815 NRXN2Q9P2S2 1712 aa24.05■■□□□ 1.44
SMARCAL1-205ENST00000425815 HLFQ16534 295 aa24.05■■□□□ 1.44
SMARCAL1-205ENST00000425815 PRR5LQ6MZQ0 368 aa24.05■■□□□ 1.44
SMARCAL1-205ENST00000425815 CCDC24Q8N4L8 307 aa24.05■■□□□ 1.44
SMARCAL1-205ENST00000425815 SETDB2Q96T68 719 aa24.05■■□□□ 1.44
SMARCAL1-205ENST00000425815 NGEFQ8N5V2 710 aa24.04■■□□□ 1.44
SMARCAL1-205ENST00000425815 CHD4Q14839 1912 aa24.04■■□□□ 1.44
SMARCAL1-205ENST00000425815 PDIA6Q15084 440 aa24.03■■□□□ 1.44
SMARCAL1-205ENST00000425815 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
SMARCAL1-205ENST00000425815 DALRD3Q5D0E6 543 aaKnown RBP24.03■■□□□ 1.44
SMARCAL1-205ENST00000425815 LRP10Q7Z4F1 713 aa24.03■■□□□ 1.44
SMARCAL1-205ENST00000425815 SCN7AQ01118 1682 aa24.02■■□□□ 1.44
SMARCAL1-205ENST00000425815 RGL2O15211 777 aa24.02■■□□□ 1.44
SMARCAL1-205ENST00000425815 TTLL7Q6ZT98 887 aa24.02■■□□□ 1.44
SMARCAL1-205ENST00000425815 MYL6BP14649 208 aa24.01■■□□□ 1.43
SMARCAL1-205ENST00000425815 ARHGAP27Q6ZUM4 889 aa24.01■■□□□ 1.43
SMARCAL1-205ENST00000425815 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
SMARCAL1-205ENST00000425815 BRIP1Q9BX63 1249 aa24.01■■□□□ 1.43
SMARCAL1-205ENST00000425815 LAS1LQ9Y4W2 734 aaKnown RBP24.01■■□□□ 1.43
SMARCAL1-205ENST00000425815 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
SMARCAL1-205ENST00000425815 EIF2S2P20042 333 aaKnown RBP24■■□□□ 1.43
SMARCAL1-205ENST00000425815 ERVV-1B6SEH8 477 aa23.99■■□□□ 1.43
SMARCAL1-205ENST00000425815 ANP32CO43423 234 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms