RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 TRIM44Q96DX7 344 aaPredicted RBP15.82■□□□□ 0.12
COL12A1-205ENST00000425443 ZNF830Q96NB3 372 aaPredicted RBP15.82■□□□□ 0.12
COL12A1-205ENST00000425443 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
COL12A1-205ENST00000425443 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
COL12A1-205ENST00000425443 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 ZSCAN23Q3MJ62 389 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 C1orf141Q5JVX7 400 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 BABAM1Q9NWV8 329 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 ATP8B2P98198 1209 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
COL12A1-205ENST00000425443 MPRIPQ6WCQ1 1025 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 ERC2O15083 957 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 NEK4P51957 841 aa15.81■□□□□ 0.12
COL12A1-205ENST00000425443 SOS1Q07889 1333 aaPredicted RBP15.8■□□□□ 0.12
COL12A1-205ENST00000425443 ST18O60284 1047 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 PRPF40AO75400 957 aaKnown RBP15.8■□□□□ 0.12
COL12A1-205ENST00000425443 PPP1R9BQ96SB3 815 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 SRCIN1Q9C0H9 1055 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 RBSNQ9H1K0 784 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 ANO2Q9NQ90 1003 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 PALD1Q9ULE6 856 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
COL12A1-205ENST00000425443 MX1P20591 662 aa15.79■□□□□ 0.12
COL12A1-205ENST00000425443 TUBGCP6Q96RT7 1819 aa15.79■□□□□ 0.12
COL12A1-205ENST00000425443 GCP02774 474 aa15.79■□□□□ 0.12
COL12A1-205ENST00000425443 PTMSP20962 102 aa15.79■□□□□ 0.12
COL12A1-205ENST00000425443 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
COL12A1-205ENST00000425443 ANXA1P04083 346 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 NUCB2P80303 420 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 USP44Q9H0E7 712 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 CHPF2Q9P2E5 772 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
COL12A1-205ENST00000425443 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 DTNBO60941 627 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
COL12A1-205ENST00000425443 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
COL12A1-205ENST00000425443 IL25Q9H293 177 aa15.78■□□□□ 0.12
COL12A1-205ENST00000425443 ZNF445P59923 1031 aa15.77■□□□□ 0.12
COL12A1-205ENST00000425443 PROSER2Q86WR7 435 aaPredicted RBP15.77■□□□□ 0.12
COL12A1-205ENST00000425443 CCDC173Q0VFZ6 552 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 AKAP4Q5JQC9 854 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 NUTM1Q86Y26 1132 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 KCNQ3O43525 872 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 EIF4A1P60842 406 aaKnown RBP15.77■□□□□ 0.11
COL12A1-205ENST00000425443 OSBPL3Q9H4L5 887 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 TMEM63CQ9P1W3 806 aa15.77■□□□□ 0.11
COL12A1-205ENST00000425443 PI4KAP2A4QPH2 592 aa15.76■□□□□ 0.11
COL12A1-205ENST00000425443 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
COL12A1-205ENST00000425443 OS9Q13438 667 aaPredicted RBP15.76■□□□□ 0.11
COL12A1-205ENST00000425443 PI4KAP1Q8N8J0 262 aa15.76■□□□□ 0.11
COL12A1-205ENST00000425443 MCCP23508 829 aa15.76■□□□□ 0.11
COL12A1-205ENST00000425443 AMOTQ4VCS5 1084 aa15.76■□□□□ 0.11
COL12A1-205ENST00000425443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL12A1-205ENST00000425443 TMX3Q96JJ7 454 aa15.76■□□□□ 0.11
COL12A1-205ENST00000425443 SRGAP3O43295 1099 aa15.75■□□□□ 0.11
COL12A1-205ENST00000425443 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
COL12A1-205ENST00000425443 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
COL12A1-205ENST00000425443 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
COL12A1-205ENST00000425443 ADGRL3Q9HAR2 1447 aa15.75■□□□□ 0.11
COL12A1-205ENST00000425443 DNAAF4Q8WXU2 420 aa15.75■□□□□ 0.11
COL12A1-205ENST00000425443 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
COL12A1-205ENST00000425443 LTN1O94822 1766 aa15.74■□□□□ 0.11
COL12A1-205ENST00000425443 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
COL12A1-205ENST00000425443 ESYT1Q9BSJ8 1104 aa15.74■□□□□ 0.11
COL12A1-205ENST00000425443 CWC22Q9HCG8 908 aaKnown RBP15.74■□□□□ 0.11
COL12A1-205ENST00000425443 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.74■□□□□ 0.11
COL12A1-205ENST00000425443 ZC3H6P61129 1189 aaKnown RBP15.73■□□□□ 0.11
COL12A1-205ENST00000425443 CNPY4Q8N129 248 aa15.73■□□□□ 0.11
COL12A1-205ENST00000425443 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
COL12A1-205ENST00000425443 CHD2O14647 1828 aaKnown RBP15.73■□□□□ 0.11
COL12A1-205ENST00000425443 CEMIPQ8WUJ3 1361 aa15.72■□□□□ 0.11
COL12A1-205ENST00000425443 SYCE3A1L190 88 aa15.72■□□□□ 0.11
COL12A1-205ENST00000425443 NBPF7P0C2Y1 421 aaPredicted RBP15.72■□□□□ 0.11
COL12A1-205ENST00000425443 ARHGEF25Q86VW2 580 aa15.72■□□□□ 0.11
COL12A1-205ENST00000425443 ANP32BQ92688 251 aaKnown RBP15.72■□□□□ 0.11
COL12A1-205ENST00000425443 DBF4Q9UBU7 674 aaPredicted RBP15.72■□□□□ 0.11
COL12A1-205ENST00000425443 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
COL12A1-205ENST00000425443 NPHP4O75161 1426 aaPredicted RBP15.72■□□□□ 0.11
COL12A1-205ENST00000425443 HOXB7P09629 217 aa15.71■□□□□ 0.11
COL12A1-205ENST00000425443 ZSCAN30Q86W11 494 aa15.71■□□□□ 0.11
COL12A1-205ENST00000425443 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
COL12A1-205ENST00000425443 CHMLP26374 656 aa15.71■□□□□ 0.11
COL12A1-205ENST00000425443 PDCL3Q9H2J4 239 aa15.71■□□□□ 0.11
COL12A1-205ENST00000425443 GDPD2Q9HCC8 539 aa15.71■□□□□ 0.11
COL12A1-205ENST00000425443 CACNA1FO60840 1977 aa15.71■□□□□ 0.1
COL12A1-205ENST00000425443 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.1
COL12A1-205ENST00000425443 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 SSH3Q8TE77 659 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 PRDM10Q9NQV6 1147 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 AIMP1Q12904 312 aaKnown RBP15.7■□□□□ 0.1
COL12A1-205ENST00000425443 RNF214Q8ND24 703 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 RHPN1Q8TCX5 695 aa15.7■□□□□ 0.1
COL12A1-205ENST00000425443 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
COL12A1-205ENST00000425443 RAPGEF4Q8WZA2 1011 aa15.69■□□□□ 0.1
COL12A1-205ENST00000425443 KIF1BPQ96EK5 621 aa15.69■□□□□ 0.1
COL12A1-205ENST00000425443 BEND3Q5T5X7 828 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms