RNA–Protein interactions for RNA: ENST00000424647.1

PPM1F-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2

Gene PPM1F, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-204ENST00000424647 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
PPM1F-204ENST00000424647 YBX3P16989 372 aaKnown RBP eCLIP21.52■■□□□ 1.04
PPM1F-204ENST00000424647 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
PPM1F-204ENST00000424647 DCTN1Q14203 1278 aa21.52■■□□□ 1.04
PPM1F-204ENST00000424647 C10orf71Q711Q0 1435 aa21.52■■□□□ 1.04
PPM1F-204ENST00000424647 FKBP8Q14318 412 aa21.51■■□□□ 1.03
PPM1F-204ENST00000424647 USPL1Q5W0Q7 1092 aa21.5■■□□□ 1.03
PPM1F-204ENST00000424647 PLEKHF1Q96S99 279 aa21.5■■□□□ 1.03
PPM1F-204ENST00000424647 KCNQ3O43525 872 aa21.49■■□□□ 1.03
PPM1F-204ENST00000424647 NFE2L2Q16236 605 aa21.49■■□□□ 1.03
PPM1F-204ENST00000424647 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
PPM1F-204ENST00000424647 A0A087WZG4 1122 aa21.48■■□□□ 1.03
PPM1F-204ENST00000424647 NPM2Q86SE8 214 aaKnown RBP21.48■■□□□ 1.03
PPM1F-204ENST00000424647 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
PPM1F-204ENST00000424647 ZNF330Q9Y3S2 320 aaPredicted RBP21.48■■□□□ 1.03
PPM1F-204ENST00000424647 PXDNLA1KZ92 1463 aa21.47■■□□□ 1.03
PPM1F-204ENST00000424647 TGFB2P61812 414 aa21.46■■□□□ 1.03
PPM1F-204ENST00000424647 DDR1Q08345 913 aa21.46■■□□□ 1.03
PPM1F-204ENST00000424647 TAF7Q15545 349 aaPredicted RBP21.46■■□□□ 1.03
PPM1F-204ENST00000424647 CHD4Q14839 1912 aa21.46■■□□□ 1.03
PPM1F-204ENST00000424647 SNRPA1P09661 255 aaKnown RBP21.45■■□□□ 1.02
PPM1F-204ENST00000424647 EIF5P55010 431 aaKnown RBP21.45■■□□□ 1.02
PPM1F-204ENST00000424647 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
PPM1F-204ENST00000424647 UTRNP46939 3433 aa21.45■■□□□ 1.02
PPM1F-204ENST00000424647 KIF13BQ9NQT8 1826 aa21.44■■□□□ 1.02
PPM1F-204ENST00000424647 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
PPM1F-204ENST00000424647 WDR43Q15061 677 aaKnown RBP eCLIP21.44■■□□□ 1.02
PPM1F-204ENST00000424647 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
PPM1F-204ENST00000424647 ZNF784Q8NCA9 323 aaPredicted RBP21.43■■□□□ 1.02
PPM1F-204ENST00000424647 A1BGP04217 495 aa21.42■■□□□ 1.02
PPM1F-204ENST00000424647 TM4SF1P30408 202 aa21.42■■□□□ 1.02
PPM1F-204ENST00000424647 NFIXQ14938 502 aa21.42■■□□□ 1.02
PPM1F-204ENST00000424647 PRKRIP1Q9H875 184 aaPredicted RBP21.42■■□□□ 1.02
PPM1F-204ENST00000424647 A0A0G2JLW4 131 aa21.41■■□□□ 1.02
PPM1F-204ENST00000424647 DPEP1P16444 411 aa21.41■■□□□ 1.02
PPM1F-204ENST00000424647 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
PPM1F-204ENST00000424647 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
PPM1F-204ENST00000424647 MIS18AQ9NYP9 233 aa21.41■■□□□ 1.02
PPM1F-204ENST00000424647 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
PPM1F-204ENST00000424647 DLG5Q8TDM6 1919 aa21.4■■□□□ 1.02
PPM1F-204ENST00000424647 LMOD3Q0VAK6 560 aa21.4■■□□□ 1.02
PPM1F-204ENST00000424647 KIAA1551Q9HCM1 1747 aa21.39■■□□□ 1.01
PPM1F-204ENST00000424647 PRAMEF22A3QJZ6 481 aa21.39■■□□□ 1.01
PPM1F-204ENST00000424647 RIPK4P57078 832 aa21.39■■□□□ 1.01
PPM1F-204ENST00000424647 TBC1D2BQ9UPU7 963 aa21.39■■□□□ 1.01
PPM1F-204ENST00000424647 BCS1LQ9Y276 419 aa21.39■■□□□ 1.01
PPM1F-204ENST00000424647 SCN7AQ01118 1682 aa21.39■■□□□ 1.01
PPM1F-204ENST00000424647 BICDL1Q6ZP65 573 aa21.38■■□□□ 1.01
PPM1F-204ENST00000424647 SERPINB2P05120 415 aa21.37■■□□□ 1.01
PPM1F-204ENST00000424647 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
PPM1F-204ENST00000424647 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
PPM1F-204ENST00000424647 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
PPM1F-204ENST00000424647 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
PPM1F-204ENST00000424647 TMPOP42166 694 aaKnown RBP21.36■■□□□ 1.01
PPM1F-204ENST00000424647 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
PPM1F-204ENST00000424647 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
PPM1F-204ENST00000424647 PIM2Q9P1W9 311 aa21.35■■□□□ 1.01
PPM1F-204ENST00000424647 CARMIL3Q8ND23 1372 aa21.35■■□□□ 1.01
PPM1F-204ENST00000424647 GOLGB1Q14789 3259 aaKnown RBP21.34■■□□□ 1.01
PPM1F-204ENST00000424647 CAMTA2O94983 1202 aa21.34■■□□□ 1.01
PPM1F-204ENST00000424647 TBC1D9BQ66K14 1250 aa21.34■■□□□ 1.01
PPM1F-204ENST00000424647 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
PPM1F-204ENST00000424647 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
PPM1F-204ENST00000424647 LAMB4A4D0S4 1761 aa21.33■■□□□ 1.01
PPM1F-204ENST00000424647 CHRNA5P30532 468 aa21.33■■□□□ 1.01
PPM1F-204ENST00000424647 EIF4A1P60842 406 aaKnown RBP21.33■■□□□ 1.01
PPM1F-204ENST00000424647 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
PPM1F-204ENST00000424647 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
PPM1F-204ENST00000424647 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
PPM1F-204ENST00000424647 GIGYF1O75420 1035 aaPredicted RBP21.32■■□□□ 1
PPM1F-204ENST00000424647 DALRD3Q5D0E6 543 aaKnown RBP21.32■■□□□ 1
PPM1F-204ENST00000424647 ADAMTS8Q9UP79 889 aa21.32■■□□□ 1
PPM1F-204ENST00000424647 NBPF26B4DH59 902 aa21.31■■□□□ 1
PPM1F-204ENST00000424647 NPHP1O15259 732 aa21.31■■□□□ 1
PPM1F-204ENST00000424647 KCNA3P22001 575 aa21.31■■□□□ 1
PPM1F-204ENST00000424647 NBPF10Q6P3W6 841 aaKnown RBP21.31■■□□□ 1
PPM1F-204ENST00000424647 NBPF15Q8N660 670 aa21.31■■□□□ 1
PPM1F-204ENST00000424647 SETDB2Q96T68 719 aa21.31■■□□□ 1
PPM1F-204ENST00000424647 BCORQ6W2J9 1755 aa21.31■■□□□ 1
PPM1F-204ENST00000424647 ATP10DQ9P241 1426 aa21.3■■□□□ 1
PPM1F-204ENST00000424647 AFDNP55196 1824 aaKnown RBP21.3■■□□□ 1
PPM1F-204ENST00000424647 BABAM1Q9NWV8 329 aa21.3■■□□□ 1
PPM1F-204ENST00000424647 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
PPM1F-204ENST00000424647 ARHGAP27Q6ZUM4 889 aa21.29■■□□□ 1
PPM1F-204ENST00000424647 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
PPM1F-204ENST00000424647 ADCY9O60503 1353 aa21.28■■□□□ 1
PPM1F-204ENST00000424647 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
PPM1F-204ENST00000424647 CNBD1Q8NA66 436 aa21.28■■□□□ 1
PPM1F-204ENST00000424647 RGL2O15211 777 aa21.27■■□□□ 1
PPM1F-204ENST00000424647 ST5P78524 1137 aa21.27■■□□□ 1
PPM1F-204ENST00000424647 PRR5LQ6MZQ0 368 aa21.27■■□□□ 1
PPM1F-204ENST00000424647 C2CD5Q86YS7 1000 aa21.27■■□□□ 1
PPM1F-204ENST00000424647 H0YIN7 160 aa21.26■□□□□ 0.99
PPM1F-204ENST00000424647 ERBB4Q15303 1308 aa21.26■□□□□ 0.99
PPM1F-204ENST00000424647 PDE6BP35913 854 aa21.25■□□□□ 0.99
PPM1F-204ENST00000424647 KIF6Q6ZMV9 814 aa21.25■□□□□ 0.99
PPM1F-204ENST00000424647 NBPF5PQ86XG9 351 aaPredicted RBP21.25■□□□□ 0.99
PPM1F-204ENST00000424647 NGEFQ8N5V2 710 aa21.25■□□□□ 0.99
PPM1F-204ENST00000424647 BRIP1Q9BX63 1249 aa21.25■□□□□ 0.99
PPM1F-204ENST00000424647 PDZRN3Q9UPQ7 1066 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms