RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
EPHA4-206ENST00000424339 HSPA1LP34931 641 aa9.53□□□□□ -0.88
EPHA4-206ENST00000424339 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
EPHA4-206ENST00000424339 BLOC1S3Q6QNY0 202 aa9.53□□□□□ -0.88
EPHA4-206ENST00000424339 CDHR5Q9HBB8 845 aa9.53□□□□□ -0.88
EPHA4-206ENST00000424339 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.88
EPHA4-206ENST00000424339 ABCC6O95255 1503 aa9.52□□□□□ -0.88
EPHA4-206ENST00000424339 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-206ENST00000424339 NME9Q86XW9 330 aa9.52□□□□□ -0.89
EPHA4-206ENST00000424339 CRYBG1Q9Y4K1 1723 aa9.52□□□□□ -0.89
EPHA4-206ENST00000424339 AATKQ6ZMQ8 1374 aa9.51□□□□□ -0.89
EPHA4-206ENST00000424339 OSBPP22059 807 aa9.51□□□□□ -0.89
EPHA4-206ENST00000424339 RALBP1Q15311 655 aa9.51□□□□□ -0.89
EPHA4-206ENST00000424339 LIAT1Q6ZQX7 453 aa9.51□□□□□ -0.89
EPHA4-206ENST00000424339 PHRF1Q9P1Y6 1649 aaKnown RBP9.51□□□□□ -0.89
EPHA4-206ENST00000424339 ABCA3Q99758 1704 aa9.51□□□□□ -0.89
EPHA4-206ENST00000424339 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
EPHA4-206ENST00000424339 CPDO75976 1380 aa9.5□□□□□ -0.89
EPHA4-206ENST00000424339 GCP02774 474 aa9.5□□□□□ -0.89
EPHA4-206ENST00000424339 MORC1Q86VD1 984 aa9.5□□□□□ -0.89
EPHA4-206ENST00000424339 GGNBP2Q9H3C7 697 aa9.5□□□□□ -0.89
EPHA4-206ENST00000424339 ST8SIA5O15466 376 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 GDF9O60383 454 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 E2F4Q16254 413 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 NFAT5O94916 1531 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 RTL1A6NKG5 1358 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 PARD3Q8TEW0 1356 aa9.49□□□□□ -0.89
EPHA4-206ENST00000424339 ANP32CO43423 234 aa9.48□□□□□ -0.89
EPHA4-206ENST00000424339 S1PR4O95977 384 aa9.48□□□□□ -0.89
EPHA4-206ENST00000424339 CC2D1BQ5T0F9 858 aaKnown RBP9.48□□□□□ -0.89
EPHA4-206ENST00000424339 LCE2AQ5TA79 106 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-206ENST00000424339 DIEXFQ68CQ4 756 aaKnown RBP9.48□□□□□ -0.89
EPHA4-206ENST00000424339 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
EPHA4-206ENST00000424339 TLL1O43897 1013 aa9.47□□□□□ -0.89
EPHA4-206ENST00000424339 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
EPHA4-206ENST00000424339 EYA1Q99502 592 aa9.47□□□□□ -0.89
EPHA4-206ENST00000424339 BLMP54132 1417 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-206ENST00000424339 LTN1O94822 1766 aa9.46□□□□□ -0.9
EPHA4-206ENST00000424339 COL14A1Q05707 1796 aaKnown RBP9.46□□□□□ -0.9
EPHA4-206ENST00000424339 ARHGEF25Q86VW2 580 aa9.46□□□□□ -0.9
EPHA4-206ENST00000424339 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
EPHA4-206ENST00000424339 PRKRIP1Q9H875 184 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-206ENST00000424339 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.9
EPHA4-206ENST00000424339 FLT4P35916 1363 aa9.46□□□□□ -0.9
EPHA4-206ENST00000424339 CDK12Q9NYV4 1490 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-206ENST00000424339 NWD2Q9ULI1 1742 aa9.45□□□□□ -0.9
EPHA4-206ENST00000424339 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
EPHA4-206ENST00000424339 WFS1O76024 890 aa9.45□□□□□ -0.9
EPHA4-206ENST00000424339 NPDC1Q9NQX5 325 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-206ENST00000424339 MYBBP1AQ9BQG0 1328 aaKnown RBP9.45□□□□□ -0.9
EPHA4-206ENST00000424339 KIAA0232Q92628 1395 aa9.45□□□□□ -0.9
EPHA4-206ENST00000424339 AMPHP49418 695 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 CFAP53Q96M91 514 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 WDR70Q9NW82 654 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 MAP3K19Q56UN5 1328 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 INSRP06213 1382 aa9.44□□□□□ -0.9
EPHA4-206ENST00000424339 LMO7Q8WWI1 1683 aa9.43□□□□□ -0.9
EPHA4-206ENST00000424339 FAM208AQ9UK61 1670 aaKnown RBP9.43□□□□□ -0.9
EPHA4-206ENST00000424339 NUTM2BA6NNL0 878 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-206ENST00000424339 NUTM2EB1AL46 878 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-206ENST00000424339 FOXC1Q12948 553 aa9.43□□□□□ -0.9
EPHA4-206ENST00000424339 MEX3CQ5U5Q3 659 aaKnown RBP9.43□□□□□ -0.9
EPHA4-206ENST00000424339 NUTM2AQ8IVF1 878 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-206ENST00000424339 IP6K1Q92551 441 aa9.43□□□□□ -0.9
EPHA4-206ENST00000424339 STK17AQ9UEE5 414 aa9.43□□□□□ -0.9
EPHA4-206ENST00000424339 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-206ENST00000424339 COL18A1P39060 1754 aa9.42□□□□□ -0.9
EPHA4-206ENST00000424339 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.42□□□□□ -0.9
EPHA4-206ENST00000424339 LRP6O75581 1613 aa9.42□□□□□ -0.9
EPHA4-206ENST00000424339 PPP2R1AP30153 589 aa9.42□□□□□ -0.9
EPHA4-206ENST00000424339 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
EPHA4-206ENST00000424339 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-206ENST00000424339 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
EPHA4-206ENST00000424339 SLIT2O94813 1529 aa9.41□□□□□ -0.9
EPHA4-206ENST00000424339 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
EPHA4-206ENST00000424339 HOXC9P31274 260 aa9.41□□□□□ -0.9
EPHA4-206ENST00000424339 TNNT2P45379 298 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-206ENST00000424339 MTHFSP49914 203 aa9.41□□□□□ -0.9
EPHA4-206ENST00000424339 RRS1Q15050 365 aaKnown RBP9.41□□□□□ -0.9
EPHA4-206ENST00000424339 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
EPHA4-206ENST00000424339 PLCH1Q4KWH8 1693 aa9.41□□□□□ -0.9
EPHA4-206ENST00000424339 PLEKHG2Q9H7P9 1386 aa9.4□□□□□ -0.9
EPHA4-206ENST00000424339 FAM83GA6ND36 823 aa9.4□□□□□ -0.9
EPHA4-206ENST00000424339 ACTN4O43707 911 aaKnown RBP9.4□□□□□ -0.9
EPHA4-206ENST00000424339 NR1I2O75469 434 aa9.4□□□□□ -0.9
EPHA4-206ENST00000424339 ADH1BP00325 375 aa9.4□□□□□ -0.9
EPHA4-206ENST00000424339 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
EPHA4-206ENST00000424339 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.9
EPHA4-206ENST00000424339 COL5A2P05997 1499 aaPredicted RBP9.4□□□□□ -0.91
EPHA4-206ENST00000424339 PEAK1Q9H792 1746 aa9.39□□□□□ -0.91
EPHA4-206ENST00000424339 CAMTA1Q9Y6Y1 1673 aa9.39□□□□□ -0.91
EPHA4-206ENST00000424339 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-206ENST00000424339 DNAJB2P25686 324 aa9.39□□□□□ -0.91
EPHA4-206ENST00000424339 ZNF772Q68DY9 489 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-206ENST00000424339 C8orf37Q96NL8 207 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms