RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RPS6KA4O75676 772 aa8.98□□□□□ -0.97
SDCBP-203ENST00000424270 DDR1Q08345 913 aa8.98□□□□□ -0.97
SDCBP-203ENST00000424270 ZNF622Q969S3 477 aaKnown RBP eCLIP8.98□□□□□ -0.97
SDCBP-203ENST00000424270 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
SDCBP-203ENST00000424270 MON2Q7Z3U7 1717 aa8.97□□□□□ -0.97
SDCBP-203ENST00000424270 NFKBIEO00221 500 aa8.97□□□□□ -0.97
SDCBP-203ENST00000424270 FBLN1P23142 703 aa8.97□□□□□ -0.97
SDCBP-203ENST00000424270 RRS1Q15050 365 aaKnown RBP8.97□□□□□ -0.97
SDCBP-203ENST00000424270 MAP1SQ66K74 1059 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-203ENST00000424270 CYP4F22Q6NT55 531 aa8.97□□□□□ -0.97
SDCBP-203ENST00000424270 CNTROBQ8N137 903 aa8.97□□□□□ -0.97
SDCBP-203ENST00000424270 NBPF15Q8N660 670 aa8.97□□□□□ -0.97
SDCBP-203ENST00000424270 TAF1DQ9H5J8 278 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-203ENST00000424270 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.97
SDCBP-203ENST00000424270 CA12O43570 354 aa8.96□□□□□ -0.98
SDCBP-203ENST00000424270 C21orf2O43822 256 aa8.96□□□□□ -0.98
SDCBP-203ENST00000424270 ITGBL1O95965 494 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-203ENST00000424270 RC3H1Q5TC82 1133 aaKnown RBP8.96□□□□□ -0.98
SDCBP-203ENST00000424270 TAOK3Q9H2K8 898 aa8.96□□□□□ -0.98
SDCBP-203ENST00000424270 ATG3Q9NT62 314 aa8.96□□□□□ -0.98
SDCBP-203ENST00000424270 HACL1Q9UJ83 578 aa8.96□□□□□ -0.98
SDCBP-203ENST00000424270 CNTNAP4Q9C0A0 1308 aa8.96□□□□□ -0.98
SDCBP-203ENST00000424270 VIRMAQ69YN4 1812 aaKnown RBP8.96□□□□□ -0.98
SDCBP-203ENST00000424270 POLRMTO00411 1230 aaKnown RBP8.95□□□□□ -0.98
SDCBP-203ENST00000424270 NPHP1O15259 732 aa8.95□□□□□ -0.98
SDCBP-203ENST00000424270 PNMA8AQ86V59 439 aaPredicted RBP8.95□□□□□ -0.98
SDCBP-203ENST00000424270 ITGB4P16144 1822 aa8.95□□□□□ -0.98
SDCBP-203ENST00000424270 USP42Q9H9J4 1324 aaKnown RBP8.95□□□□□ -0.98
SDCBP-203ENST00000424270 RTL1A6NKG5 1358 aa8.95□□□□□ -0.98
SDCBP-203ENST00000424270 AOC2O75106 756 aa8.94□□□□□ -0.98
SDCBP-203ENST00000424270 EPHX2P34913 555 aa8.94□□□□□ -0.98
SDCBP-203ENST00000424270 SLC12A5Q9H2X9 1139 aa8.94□□□□□ -0.98
SDCBP-203ENST00000424270 ABCB7O75027 752 aa8.93□□□□□ -0.98
SDCBP-203ENST00000424270 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
SDCBP-203ENST00000424270 USPL1Q5W0Q7 1092 aa8.93□□□□□ -0.98
SDCBP-203ENST00000424270 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
SDCBP-203ENST00000424270 DDX21Q9NR30 783 aaKnown RBP eCLIP8.93□□□□□ -0.98
SDCBP-203ENST00000424270 RAB3GAP2Q9H2M9 1393 aa8.93□□□□□ -0.98
SDCBP-203ENST00000424270 A0A1W2PP64 1363 aa8.92□□□□□ -0.98
SDCBP-203ENST00000424270 ROCK2O75116 1388 aaKnown RBP8.92□□□□□ -0.98
SDCBP-203ENST00000424270 PPM1GO15355 546 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-203ENST00000424270 SERPINB2P05120 415 aa8.92□□□□□ -0.98
SDCBP-203ENST00000424270 MAP2K2P36507 400 aa8.92□□□□□ -0.98
SDCBP-203ENST00000424270 CRKLP46109 303 aaKnown RBP8.92□□□□□ -0.98
SDCBP-203ENST00000424270 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-203ENST00000424270 IFNL2Q8IZJ0 200 aa8.92□□□□□ -0.98
SDCBP-203ENST00000424270 MAP2P11137 1827 aaKnown RBP8.91□□□□□ -0.98
SDCBP-203ENST00000424270 PDE4DIPQ5VU43 2346 aa8.91□□□□□ -0.98
SDCBP-203ENST00000424270 RNF123Q5XPI4 1314 aa8.91□□□□□ -0.98
SDCBP-203ENST00000424270 DLL1O00548 723 aa8.91□□□□□ -0.98
SDCBP-203ENST00000424270 HSP90AB2PQ58FF8 381 aa8.91□□□□□ -0.98
SDCBP-203ENST00000424270 CCDC88AQ3V6T2 1871 aa8.91□□□□□ -0.98
SDCBP-203ENST00000424270 KDRP35968 1356 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 TNRC18O15417 2968 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-203ENST00000424270 PHKG2P15735 406 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-203ENST00000424270 TM4SF1P30408 202 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 CABP4P57796 275 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 NFIXQ14938 502 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 HABP4Q5JVS0 413 aaKnown RBP8.9□□□□□ -0.98
SDCBP-203ENST00000424270 SOGA3Q5TF21 947 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-203ENST00000424270 SLC4A9Q96Q91 983 aa8.9□□□□□ -0.98
SDCBP-203ENST00000424270 PDE6BP35913 854 aa8.89□□□□□ -0.99
SDCBP-203ENST00000424270 CIAPIN1Q6FI81 312 aa8.89□□□□□ -0.99
SDCBP-203ENST00000424270 INSRP06213 1382 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 FLT4P35916 1363 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 ZNF541Q9H0D2 1346 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-203ENST00000424270 GGNBP2Q9H3C7 697 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 ZNF408Q9H9D4 720 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 GJA3Q9Y6H8 435 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 TLL2Q9Y6L7 1015 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
SDCBP-203ENST00000424270 SCN4AP35499 1836 aa8.87□□□□□ -0.99
SDCBP-203ENST00000424270 LTBP3Q9NS15 1303 aa8.87□□□□□ -0.99
SDCBP-203ENST00000424270 TRAF5O00463 557 aa8.87□□□□□ -0.99
SDCBP-203ENST00000424270 HSP90AB1P08238 724 aaKnown RBP8.87□□□□□ -0.99
SDCBP-203ENST00000424270 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.99
SDCBP-203ENST00000424270 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
SDCBP-203ENST00000424270 CNKSR1Q969H4 720 aa8.87□□□□□ -0.99
SDCBP-203ENST00000424270 PDZRN3Q9UPQ7 1066 aa8.87□□□□□ -0.99
SDCBP-203ENST00000424270 ERVV-2B6SEH9 535 aa8.86□□□□□ -0.99
SDCBP-203ENST00000424270 CELF2O95319 508 aaKnown RBP8.86□□□□□ -0.99
SDCBP-203ENST00000424270 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
SDCBP-203ENST00000424270 ZNF277Q9NRM2 450 aaPredicted RBP8.86□□□□□ -0.99
SDCBP-203ENST00000424270 THSD7BQ9C0I4 1608 aa8.86□□□□□ -0.99
SDCBP-203ENST00000424270 CARMIL3Q8ND23 1372 aa8.86□□□□□ -0.99
SDCBP-203ENST00000424270 CASP8AP2Q9UKL3 1982 aa8.85□□□□□ -0.99
SDCBP-203ENST00000424270 CCDC93Q567U6 631 aa8.85□□□□□ -0.99
SDCBP-203ENST00000424270 SLC17A8Q8NDX2 589 aa8.85□□□□□ -0.99
SDCBP-203ENST00000424270 JDP2Q8WYK2 163 aa8.85□□□□□ -0.99
SDCBP-203ENST00000424270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.85□□□□□ -0.99
SDCBP-203ENST00000424270 COL5A3P25940 1745 aaPredicted RBP8.85□□□□□ -0.99
SDCBP-203ENST00000424270 DLEC1Q9Y238 1755 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 EIF6P56537 245 aaKnown RBP8.84□□□□□ -0.99
SDCBP-203ENST00000424270 ST5P78524 1137 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 NOGQ13253 232 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 AKAP4Q5JQC9 854 aa8.84□□□□□ -0.99
SDCBP-203ENST00000424270 CST9Q5W186 159 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms