RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 FKBP8Q14318 412 aa26.03■■□□□ 1.76
FBXO28-202ENST00000424254 PELP1Q8IZL8 1130 aaKnown RBP26.03■■□□□ 1.76
FBXO28-202ENST00000424254 COL15A1P39059 1388 aa26.03■■□□□ 1.76
FBXO28-202ENST00000424254 THUMPD2Q9BTF0 503 aaKnown RBP26.02■■□□□ 1.76
FBXO28-202ENST00000424254 TEX13AQ9BXU3 409 aaPredicted RBP26.02■■□□□ 1.76
FBXO28-202ENST00000424254 YY1P25490 414 aa26.01■■□□□ 1.75
FBXO28-202ENST00000424254 TAF7Q15545 349 aaPredicted RBP26.01■■□□□ 1.75
FBXO28-202ENST00000424254 USPL1Q5W0Q7 1092 aa26.01■■□□□ 1.75
FBXO28-202ENST00000424254 UTRNP46939 3433 aa26.01■■□□□ 1.75
FBXO28-202ENST00000424254 MIS18AQ9NYP9 233 aa26■■□□□ 1.75
FBXO28-202ENST00000424254 PRAMEF22A3QJZ6 481 aa25.99■■□□□ 1.75
FBXO28-202ENST00000424254 ZPR1O75312 459 aa25.99■■□□□ 1.75
FBXO28-202ENST00000424254 ZNF316A6NFI3 1004 aaPredicted RBP25.98■■□□□ 1.75
FBXO28-202ENST00000424254 YBX3P16989 372 aaKnown RBP eCLIP25.98■■□□□ 1.75
FBXO28-202ENST00000424254 EIF5P55010 431 aaKnown RBP25.98■■□□□ 1.75
FBXO28-202ENST00000424254 NARFQ9UHQ1 456 aa25.98■■□□□ 1.75
FBXO28-202ENST00000424254 USP16Q9Y5T5 823 aa25.98■■□□□ 1.75
FBXO28-202ENST00000424254 PARP3Q9Y6F1 533 aa25.98■■□□□ 1.75
FBXO28-202ENST00000424254 A1BGP04217 495 aa25.97■■□□□ 1.75
FBXO28-202ENST00000424254 DDR1Q08345 913 aa25.97■■□□□ 1.75
FBXO28-202ENST00000424254 WDR43Q15061 677 aaKnown RBP eCLIP25.97■■□□□ 1.75
FBXO28-202ENST00000424254 CCDC146Q8IYE0 955 aa25.97■■□□□ 1.75
FBXO28-202ENST00000424254 BCL2L12Q9HB09 334 aa25.96■■□□□ 1.75
FBXO28-202ENST00000424254 C10orf71Q711Q0 1435 aa25.96■■□□□ 1.75
FBXO28-202ENST00000424254 SNRPA1P09661 255 aaKnown RBP25.95■■□□□ 1.75
FBXO28-202ENST00000424254 RIPK4P57078 832 aa25.95■■□□□ 1.75
FBXO28-202ENST00000424254 ADAMTS8Q9UP79 889 aa25.95■■□□□ 1.75
FBXO28-202ENST00000424254 TM4SF1P30408 202 aa25.94■■□□□ 1.74
FBXO28-202ENST00000424254 TMPOP42166 694 aaKnown RBP25.94■■□□□ 1.74
FBXO28-202ENST00000424254 ZNF330Q9Y3S2 320 aaPredicted RBP25.94■■□□□ 1.74
FBXO28-202ENST00000424254 IL6STP40189 918 aaPredicted RBP25.93■■□□□ 1.74
FBXO28-202ENST00000424254 PNISRQ8TF01 805 aaKnown RBP25.93■■□□□ 1.74
FBXO28-202ENST00000424254 WWC3Q9ULE0 1092 aa25.93■■□□□ 1.74
FBXO28-202ENST00000424254 RRP7AQ9Y3A4 280 aaKnown RBP25.93■■□□□ 1.74
FBXO28-202ENST00000424254 A0A087WZG4 1122 aa25.92■■□□□ 1.74
FBXO28-202ENST00000424254 POLRMTO00411 1230 aaKnown RBP25.92■■□□□ 1.74
FBXO28-202ENST00000424254 GOLGB1Q14789 3259 aaKnown RBP25.92■■□□□ 1.74
FBXO28-202ENST00000424254 PXDNLA1KZ92 1463 aa25.92■■□□□ 1.74
FBXO28-202ENST00000424254 PIP4K2AP48426 406 aaPredicted RBP25.91■■□□□ 1.74
FBXO28-202ENST00000424254 NFIXQ14938 502 aa25.91■■□□□ 1.74
FBXO28-202ENST00000424254 RUNDC1Q96C34 613 aa25.91■■□□□ 1.74
FBXO28-202ENST00000424254 DLG5Q8TDM6 1919 aa25.91■■□□□ 1.74
FBXO28-202ENST00000424254 TGFB2P61812 414 aa25.89■■□□□ 1.74
FBXO28-202ENST00000424254 TBC1D2BQ9UPU7 963 aa25.89■■□□□ 1.74
FBXO28-202ENST00000424254 GRIN3BO60391 1043 aa25.88■■□□□ 1.73
FBXO28-202ENST00000424254 EIF4A1P60842 406 aaKnown RBP25.88■■□□□ 1.73
FBXO28-202ENST00000424254 NEUROD2Q15784 382 aa25.88■■□□□ 1.73
FBXO28-202ENST00000424254 A0A0G2JLW4 131 aa25.88■■□□□ 1.73
FBXO28-202ENST00000424254 LMOD3Q0VAK6 560 aa25.88■■□□□ 1.73
FBXO28-202ENST00000424254 NBPF26B4DH59 902 aa25.87■■□□□ 1.73
FBXO28-202ENST00000424254 NBPF10Q6P3W6 841 aaKnown RBP25.87■■□□□ 1.73
FBXO28-202ENST00000424254 NBPF15Q8N660 670 aa25.87■■□□□ 1.73
FBXO28-202ENST00000424254 GIGYF1O75420 1035 aaPredicted RBP25.86■■□□□ 1.73
FBXO28-202ENST00000424254 DPEP1P16444 411 aa25.86■■□□□ 1.73
FBXO28-202ENST00000424254 CCDC184Q52MB2 194 aa25.86■■□□□ 1.73
FBXO28-202ENST00000424254 CAMTA2O94983 1202 aa25.85■■□□□ 1.73
FBXO28-202ENST00000424254 BICDL1Q6ZP65 573 aa25.85■■□□□ 1.73
FBXO28-202ENST00000424254 NPM2Q86SE8 214 aaKnown RBP25.85■■□□□ 1.73
FBXO28-202ENST00000424254 TSPYL4Q9UJ04 414 aa25.85■■□□□ 1.73
FBXO28-202ENST00000424254 TRIM35Q9UPQ4 493 aa25.85■■□□□ 1.73
FBXO28-202ENST00000424254 KIF13BQ9NQT8 1826 aa25.84■■□□□ 1.73
FBXO28-202ENST00000424254 KDM3BQ7LBC6 1761 aa25.84■■□□□ 1.73
FBXO28-202ENST00000424254 TBC1D9BQ66K14 1250 aa25.84■■□□□ 1.73
FBXO28-202ENST00000424254 DZIP3Q86Y13 1208 aaKnown RBP25.84■■□□□ 1.73
FBXO28-202ENST00000424254 SERPINB2P05120 415 aa25.83■■□□□ 1.73
FBXO28-202ENST00000424254 KIAA1551Q9HCM1 1747 aa25.83■■□□□ 1.72
FBXO28-202ENST00000424254 KCNA3P22001 575 aa25.82■■□□□ 1.72
FBXO28-202ENST00000424254 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
FBXO28-202ENST00000424254 BABAM1Q9NWV8 329 aa25.8■■□□□ 1.72
FBXO28-202ENST00000424254 BCS1LQ9Y276 419 aa25.79■■□□□ 1.72
FBXO28-202ENST00000424254 CHRNA5P30532 468 aa25.78■■□□□ 1.72
FBXO28-202ENST00000424254 ZNF784Q8NCA9 323 aaPredicted RBP25.78■■□□□ 1.72
FBXO28-202ENST00000424254 APAF1O14727 1248 aa25.77■■□□□ 1.72
FBXO28-202ENST00000424254 CARMIL3Q8ND23 1372 aa25.77■■□□□ 1.72
FBXO28-202ENST00000424254 N4BP2Q86UW6 1770 aaPredicted RBP25.76■■□□□ 1.71
FBXO28-202ENST00000424254 ANP32CO43423 234 aa25.76■■□□□ 1.71
FBXO28-202ENST00000424254 CHL1O00533 1208 aa25.75■■□□□ 1.71
FBXO28-202ENST00000424254 NRXN2Q9P2S2 1712 aa25.75■■□□□ 1.71
FBXO28-202ENST00000424254 CLEC4GQ6UXB4 293 aa25.74■■□□□ 1.71
FBXO28-202ENST00000424254 NGEFQ8N5V2 710 aa25.74■■□□□ 1.71
FBXO28-202ENST00000424254 SETDB2Q96T68 719 aa25.74■■□□□ 1.71
FBXO28-202ENST00000424254 PIM2Q9P1W9 311 aa25.74■■□□□ 1.71
FBXO28-202ENST00000424254 LAS1LQ9Y4W2 734 aaKnown RBP25.74■■□□□ 1.71
FBXO28-202ENST00000424254 LAMB4A4D0S4 1761 aa25.74■■□□□ 1.71
FBXO28-202ENST00000424254 MYL6BP14649 208 aa25.72■■□□□ 1.71
FBXO28-202ENST00000424254 PRR5LQ6MZQ0 368 aa25.72■■□□□ 1.71
FBXO28-202ENST00000424254 CCDC24Q8N4L8 307 aa25.72■■□□□ 1.71
FBXO28-202ENST00000424254 ZNF652Q9Y2D9 606 aa25.72■■□□□ 1.71
FBXO28-202ENST00000424254 BCORQ6W2J9 1755 aa25.71■■□□□ 1.71
FBXO28-202ENST00000424254 HLFQ16534 295 aa25.71■■□□□ 1.71
FBXO28-202ENST00000424254 KRT24Q2M2I5 525 aa25.71■■□□□ 1.71
FBXO28-202ENST00000424254 CHD4Q14839 1912 aa25.71■■□□□ 1.71
FBXO28-202ENST00000424254 RGL2O15211 777 aa25.7■■□□□ 1.71
FBXO28-202ENST00000424254 EIF2S2P20042 333 aaKnown RBP25.7■■□□□ 1.71
FBXO28-202ENST00000424254 DALRD3Q5D0E6 543 aaKnown RBP25.7■■□□□ 1.71
FBXO28-202ENST00000424254 MRS2Q9HD23 443 aa25.7■■□□□ 1.71
FBXO28-202ENST00000424254 AFDNP55196 1824 aaKnown RBP25.7■■□□□ 1.7
FBXO28-202ENST00000424254 ERBB4Q15303 1308 aa25.7■■□□□ 1.7
FBXO28-202ENST00000424254 TTLL7Q6ZT98 887 aa25.69■■□□□ 1.7
FBXO28-202ENST00000424254 PDIA6Q15084 440 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms