RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 BACH2Q9BYV9 841 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 PDE4AP27815 886 aa12.74□□□□□ -0.37
POLR1A-204ENST00000424089 COL13A1Q5TAT6 717 aaPredicted RBP12.74□□□□□ -0.37
POLR1A-204ENST00000424089 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
POLR1A-204ENST00000424089 COL23A1Q86Y22 540 aaPredicted RBP12.74□□□□□ -0.37
POLR1A-204ENST00000424089 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
POLR1A-204ENST00000424089 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
POLR1A-204ENST00000424089 CHL1O00533 1208 aa12.73□□□□□ -0.37
POLR1A-204ENST00000424089 RLBP1P12271 317 aa12.73□□□□□ -0.37
POLR1A-204ENST00000424089 TRIM27P14373 513 aa12.73□□□□□ -0.37
POLR1A-204ENST00000424089 HOXC9P31274 260 aa12.73□□□□□ -0.37
POLR1A-204ENST00000424089 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
POLR1A-204ENST00000424089 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
POLR1A-204ENST00000424089 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
POLR1A-204ENST00000424089 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
POLR1A-204ENST00000424089 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
POLR1A-204ENST00000424089 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
POLR1A-204ENST00000424089 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
POLR1A-204ENST00000424089 DNAJC5GQ8N7S2 189 aa12.72□□□□□ -0.37
POLR1A-204ENST00000424089 EYA1Q99502 592 aa12.72□□□□□ -0.37
POLR1A-204ENST00000424089 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
POLR1A-204ENST00000424089 KIF3CO14782 793 aa12.71□□□□□ -0.37
POLR1A-204ENST00000424089 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.37
POLR1A-204ENST00000424089 MRPL50Q8N5N7 158 aaKnown RBP12.71□□□□□ -0.37
POLR1A-204ENST00000424089 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
POLR1A-204ENST00000424089 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
POLR1A-204ENST00000424089 ADCY9O60503 1353 aa12.7□□□□□ -0.38
POLR1A-204ENST00000424089 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
POLR1A-204ENST00000424089 IGHDP01880 384 aa12.7□□□□□ -0.38
POLR1A-204ENST00000424089 PRELPP51888 382 aa12.7□□□□□ -0.38
POLR1A-204ENST00000424089 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
POLR1A-204ENST00000424089 API5Q9BZZ5 524 aaKnown RBP12.7□□□□□ -0.38
POLR1A-204ENST00000424089 WWC3Q9ULE0 1092 aa12.7□□□□□ -0.38
POLR1A-204ENST00000424089 MEGF6O75095 1541 aa12.7□□□□□ -0.38
POLR1A-204ENST00000424089 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
POLR1A-204ENST00000424089 AK7Q96M32 723 aa12.69□□□□□ -0.38
POLR1A-204ENST00000424089 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
POLR1A-204ENST00000424089 TOMM70O94826 608 aa12.68□□□□□ -0.38
POLR1A-204ENST00000424089 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
POLR1A-204ENST00000424089 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
POLR1A-204ENST00000424089 ITPRIPQ8IWB1 547 aa12.68□□□□□ -0.38
POLR1A-204ENST00000424089 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
POLR1A-204ENST00000424089 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
POLR1A-204ENST00000424089 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
POLR1A-204ENST00000424089 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
POLR1A-204ENST00000424089 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
POLR1A-204ENST00000424089 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
POLR1A-204ENST00000424089 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
POLR1A-204ENST00000424089 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
POLR1A-204ENST00000424089 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
POLR1A-204ENST00000424089 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
POLR1A-204ENST00000424089 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
POLR1A-204ENST00000424089 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
POLR1A-204ENST00000424089 TNNQ9UQP3 1299 aa12.66□□□□□ -0.38
POLR1A-204ENST00000424089 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
POLR1A-204ENST00000424089 ITGB4P16144 1822 aa12.65□□□□□ -0.38
POLR1A-204ENST00000424089 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
POLR1A-204ENST00000424089 MPRIPQ6WCQ1 1025 aa12.65□□□□□ -0.38
POLR1A-204ENST00000424089 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
POLR1A-204ENST00000424089 ABCC4O15439 1325 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 PTPRCP08575 1304 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 PHF14O94880 888 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 NBPF6Q5VWK0 638 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 MCM10Q7L590 875 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
POLR1A-204ENST00000424089 USHBP1Q8N6Y0 703 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 KLRG1Q96E93 195 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 NBPF4Q96M43 638 aa12.64□□□□□ -0.39
POLR1A-204ENST00000424089 ZBTB7BO15156 539 aaPredicted RBP12.63□□□□□ -0.39
POLR1A-204ENST00000424089 SSFA2P28290 1259 aa12.63□□□□□ -0.39
POLR1A-204ENST00000424089 HTRA3P83110 453 aa12.63□□□□□ -0.39
POLR1A-204ENST00000424089 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
POLR1A-204ENST00000424089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
POLR1A-204ENST00000424089 RGS3P49796 1198 aa12.62□□□□□ -0.39
POLR1A-204ENST00000424089 INTS3Q68E01 1043 aaKnown RBP12.62□□□□□ -0.39
POLR1A-204ENST00000424089 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
POLR1A-204ENST00000424089 DDRGK1Q96HY6 314 aa12.62□□□□□ -0.39
POLR1A-204ENST00000424089 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
POLR1A-204ENST00000424089 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
POLR1A-204ENST00000424089 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
POLR1A-204ENST00000424089 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
POLR1A-204ENST00000424089 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
POLR1A-204ENST00000424089 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
POLR1A-204ENST00000424089 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
POLR1A-204ENST00000424089 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
POLR1A-204ENST00000424089 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
POLR1A-204ENST00000424089 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
POLR1A-204ENST00000424089 PDZRN3Q9UPQ7 1066 aa12.61□□□□□ -0.39
POLR1A-204ENST00000424089 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
POLR1A-204ENST00000424089 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
POLR1A-204ENST00000424089 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
POLR1A-204ENST00000424089 NMRK2Q9NPI5 230 aa12.6□□□□□ -0.39
POLR1A-204ENST00000424089 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
POLR1A-204ENST00000424089 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
POLR1A-204ENST00000424089 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
POLR1A-204ENST00000424089 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 CYP27B1O15528 508 aa12.58□□□□□ -0.4
POLR1A-204ENST00000424089 HOXB7P09629 217 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms