RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ARID3AQ99856 593 aa17.54■□□□□ 0.4
MSH5-206ENST00000423982 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
MSH5-206ENST00000423982 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
MSH5-206ENST00000423982 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
MSH5-206ENST00000423982 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
MSH5-206ENST00000423982 FAM13BQ9NYF5 915 aa17.53■□□□□ 0.4
MSH5-206ENST00000423982 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
MSH5-206ENST00000423982 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
MSH5-206ENST00000423982 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
MSH5-206ENST00000423982 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.52■□□□□ 0.4
MSH5-206ENST00000423982 PDLIM2Q96JY6 352 aa17.52■□□□□ 0.4
MSH5-206ENST00000423982 PDCL3Q9H2J4 239 aa17.52■□□□□ 0.4
MSH5-206ENST00000423982 STRN4Q9NRL3 753 aa17.52■□□□□ 0.4
MSH5-206ENST00000423982 NOL7Q9UMY1 257 aaKnown RBP17.52■□□□□ 0.39
MSH5-206ENST00000423982 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
MSH5-206ENST00000423982 ST18O60284 1047 aa17.51■□□□□ 0.39
MSH5-206ENST00000423982 CERKQ8TCT0 537 aa17.51■□□□□ 0.39
MSH5-206ENST00000423982 NHSL1Q5SYE7 1610 aa17.51■□□□□ 0.39
MSH5-206ENST00000423982 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
MSH5-206ENST00000423982 MPNDQ8N594 471 aa17.5■□□□□ 0.39
MSH5-206ENST00000423982 RGS12O14924 1447 aa17.5■□□□□ 0.39
MSH5-206ENST00000423982 ERBB3P21860 1342 aa17.5■□□□□ 0.39
MSH5-206ENST00000423982 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
MSH5-206ENST00000423982 MCM10Q7L590 875 aa17.5■□□□□ 0.39
MSH5-206ENST00000423982 RGPD5Q99666 1765 aa17.49■□□□□ 0.39
MSH5-206ENST00000423982 NEK4P51957 841 aa17.49■□□□□ 0.39
MSH5-206ENST00000423982 CWC22Q9HCG8 908 aaKnown RBP17.49■□□□□ 0.39
MSH5-206ENST00000423982 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
MSH5-206ENST00000423982 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
MSH5-206ENST00000423982 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
MSH5-206ENST00000423982 LRSAM1Q6UWE0 723 aa17.48■□□□□ 0.39
MSH5-206ENST00000423982 UQCRHLA0A096LP55 91 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 UQCRHP07919 91 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 F6X3S4 739 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 ZNF500O60304 480 aaPredicted RBP17.47■□□□□ 0.39
MSH5-206ENST00000423982 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
MSH5-206ENST00000423982 ERC2O15083 957 aa17.46■□□□□ 0.39
MSH5-206ENST00000423982 RPAP2Q8IXW5 612 aaPredicted RBP17.46■□□□□ 0.39
MSH5-206ENST00000423982 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
MSH5-206ENST00000423982 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
MSH5-206ENST00000423982 REC8O95072 547 aa17.45■□□□□ 0.38
MSH5-206ENST00000423982 KDRP35968 1356 aa17.45■□□□□ 0.38
MSH5-206ENST00000423982 HS1BP3Q53T59 392 aa17.45■□□□□ 0.38
MSH5-206ENST00000423982 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
MSH5-206ENST00000423982 G2E3Q7L622 706 aa17.45■□□□□ 0.38
MSH5-206ENST00000423982 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
MSH5-206ENST00000423982 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
MSH5-206ENST00000423982 EVA1CP58658 441 aa17.44■□□□□ 0.38
MSH5-206ENST00000423982 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
MSH5-206ENST00000423982 JARID2Q92833 1246 aaPredicted RBP17.44■□□□□ 0.38
MSH5-206ENST00000423982 BTG4Q9NY30 223 aa17.44■□□□□ 0.38
MSH5-206ENST00000423982 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
MSH5-206ENST00000423982 PDE1AP54750 535 aa17.43■□□□□ 0.38
MSH5-206ENST00000423982 CRYBG1Q9Y4K1 1723 aa17.43■□□□□ 0.38
MSH5-206ENST00000423982 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
MSH5-206ENST00000423982 GADD45BO75293 160 aaPredicted RBP17.42■□□□□ 0.38
MSH5-206ENST00000423982 AHDC1Q5TGY3 1603 aaPredicted RBP17.42■□□□□ 0.38
MSH5-206ENST00000423982 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
MSH5-206ENST00000423982 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
MSH5-206ENST00000423982 CPDO75976 1380 aa17.42■□□□□ 0.38
MSH5-206ENST00000423982 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
MSH5-206ENST00000423982 DTNBO60941 627 aa17.4■□□□□ 0.38
MSH5-206ENST00000423982 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
MSH5-206ENST00000423982 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
MSH5-206ENST00000423982 CHL1O00533 1208 aa17.4■□□□□ 0.38
MSH5-206ENST00000423982 BRD1O95696 1058 aa17.4■□□□□ 0.38
MSH5-206ENST00000423982 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
MSH5-206ENST00000423982 COL16A1Q07092 1604 aaPredicted RBP17.39■□□□□ 0.38
MSH5-206ENST00000423982 ABCA3Q99758 1704 aa17.39■□□□□ 0.37
MSH5-206ENST00000423982 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
MSH5-206ENST00000423982 TERF1P54274 439 aa17.39■□□□□ 0.37
MSH5-206ENST00000423982 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
MSH5-206ENST00000423982 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
MSH5-206ENST00000423982 HSPA1LP34931 641 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 MPRIPQ6WCQ1 1025 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 TSC1Q92574 1164 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 IL25Q9H293 177 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 COL18A1P39060 1754 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
MSH5-206ENST00000423982 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
MSH5-206ENST00000423982 TCHHQ07283 1943 aa17.37■□□□□ 0.37
MSH5-206ENST00000423982 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
MSH5-206ENST00000423982 GNAT3A8MTJ3 354 aa17.37■□□□□ 0.37
MSH5-206ENST00000423982 C17orf53Q8N3J3 647 aaPredicted RBP17.37■□□□□ 0.37
MSH5-206ENST00000423982 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
MSH5-206ENST00000423982 WDR17Q8IZU2 1322 aa17.37■□□□□ 0.37
MSH5-206ENST00000423982 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
MSH5-206ENST00000423982 TSPY26PQ9H489 355 aa17.36■□□□□ 0.37
MSH5-206ENST00000423982 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
MSH5-206ENST00000423982 MBD3O95983 291 aa17.36■□□□□ 0.37
MSH5-206ENST00000423982 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
MSH5-206ENST00000423982 C8orf37Q96NL8 207 aa17.36■□□□□ 0.37
MSH5-206ENST00000423982 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms