RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 ZNF790Q6PG37 636 aa19.74■□□□□ 0.75
SRRT-201ENST00000423692 TTC5Q8N0Z6 440 aa19.74■□□□□ 0.75
SRRT-201ENST00000423692 NARFQ9UHQ1 456 aa19.74■□□□□ 0.75
SRRT-201ENST00000423692 COL15A1P39059 1388 aa19.73■□□□□ 0.75
SRRT-201ENST00000423692 SIPA1L3O60292 1781 aaPredicted RBP19.73■□□□□ 0.75
SRRT-201ENST00000423692 POLRMTO00411 1230 aaKnown RBP19.73■□□□□ 0.75
SRRT-201ENST00000423692 ZNF496Q96IT1 587 aaPredicted RBP19.73■□□□□ 0.75
SRRT-201ENST00000423692 HEG1Q9ULI3 1381 aa19.72■□□□□ 0.75
SRRT-201ENST00000423692 FCHSD2O94868 740 aa19.72■□□□□ 0.75
SRRT-201ENST00000423692 STARD3NLO95772 234 aa19.72■□□□□ 0.75
SRRT-201ENST00000423692 TEX13AQ9BXU3 409 aaPredicted RBP19.72■□□□□ 0.75
SRRT-201ENST00000423692 N4BP2Q86UW6 1770 aaPredicted RBP19.72■□□□□ 0.75
SRRT-201ENST00000423692 U2AF1L5P0DN76 240 aaPredicted RBP19.71■□□□□ 0.75
SRRT-201ENST00000423692 EIF5P55010 431 aaKnown RBP19.71■□□□□ 0.75
SRRT-201ENST00000423692 U2AF1Q01081 240 aaKnown RBP eCLIP19.71■□□□□ 0.754e-24■■■□□ 19.2
SRRT-201ENST00000423692 BCL2L12Q9HB09 334 aa19.7■□□□□ 0.74
SRRT-201ENST00000423692 BCS1LQ9Y276 419 aa19.7■□□□□ 0.74
SRRT-201ENST00000423692 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
SRRT-201ENST00000423692 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
SRRT-201ENST00000423692 NFIXQ14938 502 aa19.68■□□□□ 0.74
SRRT-201ENST00000423692 FMNL2Q96PY5 1086 aa19.68■□□□□ 0.74
SRRT-201ENST00000423692 PIM2Q9P1W9 311 aa19.68■□□□□ 0.74
SRRT-201ENST00000423692 A0A087WZG4 1122 aa19.67■□□□□ 0.74
SRRT-201ENST00000423692 HTATSF1O43719 755 aaKnown RBP19.67■□□□□ 0.74
SRRT-201ENST00000423692 BTBD11A6QL63 1104 aa19.66■□□□□ 0.74
SRRT-201ENST00000423692 GPBP1L1Q9HC44 474 aaPredicted RBP19.66■□□□□ 0.74
SRRT-201ENST00000423692 NRXN2Q9P2S2 1712 aa19.65■□□□□ 0.74
SRRT-201ENST00000423692 KCNQ3O43525 872 aa19.65■□□□□ 0.74
SRRT-201ENST00000423692 IL6STP40189 918 aaPredicted RBP19.65■□□□□ 0.74
SRRT-201ENST00000423692 DALRD3Q5D0E6 543 aaKnown RBP19.64■□□□□ 0.73
SRRT-201ENST00000423692 ARHGAP27Q6ZUM4 889 aa19.64■□□□□ 0.73
SRRT-201ENST00000423692 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
SRRT-201ENST00000423692 SENP3-EIF4A1A0A087X0R7 540 aa19.63■□□□□ 0.73
SRRT-201ENST00000423692 SERPINB2P05120 415 aa19.63■□□□□ 0.73
SRRT-201ENST00000423692 CHRNA5P30532 468 aa19.63■□□□□ 0.73
SRRT-201ENST00000423692 MCM10Q7L590 875 aa19.63■□□□□ 0.73
SRRT-201ENST00000423692 ARFGEF1Q9Y6D6 1849 aa19.62■□□□□ 0.73
SRRT-201ENST00000423692 A1BGP04217 495 aa19.62■□□□□ 0.73
SRRT-201ENST00000423692 AFDNP55196 1824 aaKnown RBP19.6■□□□□ 0.73
SRRT-201ENST00000423692 ZNF526Q8TF50 670 aaPredicted RBP19.6■□□□□ 0.73
SRRT-201ENST00000423692 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
SRRT-201ENST00000423692 SCN7AQ01118 1682 aa19.59■□□□□ 0.73
SRRT-201ENST00000423692 SNRPA1P09661 255 aaKnown RBP19.59■□□□□ 0.73
SRRT-201ENST00000423692 DCTN1Q14203 1278 aa19.59■□□□□ 0.73
SRRT-201ENST00000423692 TBC1D9BQ66K14 1250 aa19.59■□□□□ 0.73
SRRT-201ENST00000423692 PLEKHF1Q96S99 279 aa19.59■□□□□ 0.73
SRRT-201ENST00000423692 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
SRRT-201ENST00000423692 KIF3CO14782 793 aa19.58■□□□□ 0.72
SRRT-201ENST00000423692 CAMTA2O94983 1202 aa19.58■□□□□ 0.72
SRRT-201ENST00000423692 TAF7Q15545 349 aaPredicted RBP19.58■□□□□ 0.72
SRRT-201ENST00000423692 CARMIL3Q8ND23 1372 aa19.57■□□□□ 0.72
SRRT-201ENST00000423692 PRAMEF22A3QJZ6 481 aa19.56■□□□□ 0.72
SRRT-201ENST00000423692 C9orf131Q5VYM1 1079 aa19.56■□□□□ 0.72
SRRT-201ENST00000423692 BICDL1Q6ZP65 573 aa19.56■□□□□ 0.72
SRRT-201ENST00000423692 CEP350Q5VT06 3117 aa19.56■□□□□ 0.72
SRRT-201ENST00000423692 NEFMP07197 916 aa19.55■□□□□ 0.72
SRRT-201ENST00000423692 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
SRRT-201ENST00000423692 BRIP1Q9BX63 1249 aa19.55■□□□□ 0.72
SRRT-201ENST00000423692 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
SRRT-201ENST00000423692 ZNF330Q9Y3S2 320 aaPredicted RBP19.55■□□□□ 0.72
SRRT-201ENST00000423692 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
SRRT-201ENST00000423692 RALBP1Q15311 655 aa19.54■□□□□ 0.72
SRRT-201ENST00000423692 PRR5LQ6MZQ0 368 aa19.54■□□□□ 0.72
SRRT-201ENST00000423692 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
SRRT-201ENST00000423692 C2CD5Q86YS7 1000 aa19.54■□□□□ 0.72
SRRT-201ENST00000423692 TTLL6Q8N841 843 aa19.54■□□□□ 0.72
SRRT-201ENST00000423692 H0YIN7 160 aa19.53■□□□□ 0.72
SRRT-201ENST00000423692 RGL2O15211 777 aa19.53■□□□□ 0.72
SRRT-201ENST00000423692 NFE2L2Q16236 605 aa19.53■□□□□ 0.72
SRRT-201ENST00000423692 CLEC4GQ6UXB4 293 aa19.53■□□□□ 0.72
SRRT-201ENST00000423692 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
SRRT-201ENST00000423692 PNNQ9H307 717 aaKnown RBP19.53■□□□□ 0.72
SRRT-201ENST00000423692 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
SRRT-201ENST00000423692 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
SRRT-201ENST00000423692 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
SRRT-201ENST00000423692 SETDB2Q96T68 719 aa19.52■□□□□ 0.72
SRRT-201ENST00000423692 BCORQ6W2J9 1755 aa19.52■□□□□ 0.71
SRRT-201ENST00000423692 PDE6BP35913 854 aa19.51■□□□□ 0.71
SRRT-201ENST00000423692 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
SRRT-201ENST00000423692 MIS18AQ9NYP9 233 aa19.51■□□□□ 0.71
SRRT-201ENST00000423692 RNF181Q9P0P0 153 aa19.51■□□□□ 0.71
SRRT-201ENST00000423692 ANKRD31Q8N7Z5 1873 aa19.5■□□□□ 0.71
SRRT-201ENST00000423692 HSPA6P17066 643 aa19.49■□□□□ 0.71
SRRT-201ENST00000423692 DLG5Q8TDM6 1919 aa19.49■□□□□ 0.71
SRRT-201ENST00000423692 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
SRRT-201ENST00000423692 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
SRRT-201ENST00000423692 TOMM70O94826 608 aa19.48■□□□□ 0.71
SRRT-201ENST00000423692 CNBD1Q8NA66 436 aa19.48■□□□□ 0.71
SRRT-201ENST00000423692 NMRK2Q9NPI5 230 aa19.48■□□□□ 0.71
SRRT-201ENST00000423692 ZNF652Q9Y2D9 606 aa19.48■□□□□ 0.71
SRRT-201ENST00000423692 MAPK8IP3Q9UPT6 1336 aa19.48■□□□□ 0.71
SRRT-201ENST00000423692 PRELPP51888 382 aa19.47■□□□□ 0.71
SRRT-201ENST00000423692 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
SRRT-201ENST00000423692 RASSF7Q02833 373 aa19.47■□□□□ 0.71
SRRT-201ENST00000423692 CCDC24Q8N4L8 307 aa19.47■□□□□ 0.71
SRRT-201ENST00000423692 SBF1O95248 1867 aa19.47■□□□□ 0.71
SRRT-201ENST00000423692 LMNB1P20700 586 aa19.46■□□□□ 0.71
SRRT-201ENST00000423692 ST5P78524 1137 aa19.46■□□□□ 0.71
SRRT-201ENST00000423692 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
SRRT-201ENST00000423692 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms