RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
SCN5A-205ENST00000423572 SMARCC1Q92922 1105 aaPredicted RBP12.87□□□□□ -0.35
SCN5A-205ENST00000423572 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
SCN5A-205ENST00000423572 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
SCN5A-205ENST00000423572 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
SCN5A-205ENST00000423572 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
SCN5A-205ENST00000423572 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
SCN5A-205ENST00000423572 ZNF771Q7L3S4 317 aaPredicted RBP12.86□□□□□ -0.35
SCN5A-205ENST00000423572 STK25O00506 426 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 CDC45O75419 566 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 DDB1Q16531 1140 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
SCN5A-205ENST00000423572 PHACTR2O75167 634 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
SCN5A-205ENST00000423572 USP8P40818 1118 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 NACA2Q9H009 215 aa12.86□□□□□ -0.35
SCN5A-205ENST00000423572 KIAA1328Q86T90 577 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 ZC3H12CQ9C0D7 883 aaKnown RBP12.85□□□□□ -0.35
SCN5A-205ENST00000423572 NFE2L2Q16236 605 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
SCN5A-205ENST00000423572 RIOK3O14730 519 aaKnown RBP12.85□□□□□ -0.35
SCN5A-205ENST00000423572 SRGAP3O43295 1099 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 ACTN2P35609 894 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 ZNF804AQ7Z570 1209 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 MROH2BQ7Z745 1585 aa12.85□□□□□ -0.35
SCN5A-205ENST00000423572 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
SCN5A-205ENST00000423572 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
SCN5A-205ENST00000423572 KIF5BP33176 963 aa12.84□□□□□ -0.35
SCN5A-205ENST00000423572 RRS1Q15050 365 aaKnown RBP12.84□□□□□ -0.35
SCN5A-205ENST00000423572 USP37Q86T82 979 aa12.84□□□□□ -0.35
SCN5A-205ENST00000423572 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.35
SCN5A-205ENST00000423572 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
SCN5A-205ENST00000423572 STX6O43752 255 aa12.84□□□□□ -0.35
SCN5A-205ENST00000423572 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
SCN5A-205ENST00000423572 CACNA2D4Q7Z3S7 1137 aa12.83□□□□□ -0.35
SCN5A-205ENST00000423572 EYA3Q99504 573 aa12.83□□□□□ -0.35
SCN5A-205ENST00000423572 ZWINTO95229 277 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 CCDC175P0C221 793 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 M0QZ92 97 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 MYD88Q99836 296 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 DPH6Q7L8W6 267 aa12.83□□□□□ -0.36
SCN5A-205ENST00000423572 SNX16P57768 344 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 SREK1Q8WXA9 508 aaKnown RBP12.82□□□□□ -0.36
SCN5A-205ENST00000423572 PICALMQ13492 652 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 KAT14Q9H8E8 782 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 NDC80O14777 642 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
SCN5A-205ENST00000423572 HAUS7Q99871 368 aa12.82□□□□□ -0.36
SCN5A-205ENST00000423572 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 IMPG2Q9BZV3 1241 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 KRT32Q14532 448 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 SMCR8Q8TEV9 937 aaPredicted RBP12.81□□□□□ -0.36
SCN5A-205ENST00000423572 SMC1AQ14683 1233 aaKnown RBP12.81□□□□□ -0.36
SCN5A-205ENST00000423572 ARID5AQ03989 594 aa12.81□□□□□ -0.36
SCN5A-205ENST00000423572 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
SCN5A-205ENST00000423572 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
SCN5A-205ENST00000423572 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 TRIM6Q9C030 488 aaPredicted RBP12.8□□□□□ -0.36
SCN5A-205ENST00000423572 TSPY3P0CV98 308 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 TSPY8P0CW00 308 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 BLOC1S2Q6QNY1 142 aa12.8□□□□□ -0.36
SCN5A-205ENST00000423572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCN5A-205ENST00000423572 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 MBD3O95983 291 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 TCERG1LQ5VWI1 586 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
SCN5A-205ENST00000423572 CFAP65Q6ZU64 1925 aaKnown RBP12.79□□□□□ -0.36
SCN5A-205ENST00000423572 TBCAO75347 108 aaKnown RBP12.79□□□□□ -0.36
SCN5A-205ENST00000423572 RRP1P56182 461 aaKnown RBP12.79□□□□□ -0.36
SCN5A-205ENST00000423572 TTF1Q15361 905 aaPredicted RBP12.79□□□□□ -0.36
SCN5A-205ENST00000423572 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms