RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 FAM208AQ9UK61 1670 aaKnown RBP15.27■□□□□ 0.04
CTCFL-204ENST00000422869 NEO1Q92859 1461 aa15.27■□□□□ 0.04
CTCFL-204ENST00000422869 STX6O43752 255 aa15.27■□□□□ 0.04
CTCFL-204ENST00000422869 ATP8B2P98198 1209 aa15.27■□□□□ 0.04
CTCFL-204ENST00000422869 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.04
CTCFL-204ENST00000422869 NUDT16Q96DE0 195 aaKnown RBP15.27■□□□□ 0.04
CTCFL-204ENST00000422869 ARHGEF10O15013 1369 aa15.27■□□□□ 0.03
CTCFL-204ENST00000422869 N4BP2Q86UW6 1770 aaPredicted RBP15.27■□□□□ 0.03
CTCFL-204ENST00000422869 RIMS1Q86UR5 1692 aaKnown RBP15.26■□□□□ 0.03
CTCFL-204ENST00000422869 F13A1P00488 732 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 AOX1Q06278 1338 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 RAD50Q92878 1312 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 FIBPO43427 364 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 TAF7LQ5H9L4 462 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 RUFY3Q7L099 469 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
CTCFL-204ENST00000422869 RIOK3O14730 519 aaKnown RBP15.25■□□□□ 0.03
CTCFL-204ENST00000422869 AK2P54819 239 aa15.25■□□□□ 0.03
CTCFL-204ENST00000422869 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
CTCFL-204ENST00000422869 ANKRD7Q92527 254 aa15.25■□□□□ 0.03
CTCFL-204ENST00000422869 LARP6Q9BRS8 491 aaKnown RBP15.25■□□□□ 0.03
CTCFL-204ENST00000422869 GTPBP4Q9BZE4 634 aaKnown RBP15.25■□□□□ 0.03
CTCFL-204ENST00000422869 FOXO3O43524 673 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 GNAI3P08754 354 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 PDCL2Q8N4E4 241 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
CTCFL-204ENST00000422869 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
CTCFL-204ENST00000422869 SGSM2O43147 1006 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 CTIFO43310 598 aaKnown RBP15.23■□□□□ 0.03
CTCFL-204ENST00000422869 IL1RAPL2Q9NP60 686 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 DIAPH3Q9NSV4 1193 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTCFL-204ENST00000422869 FLIIQ13045 1269 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
CTCFL-204ENST00000422869 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
CTCFL-204ENST00000422869 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.23■□□□□ 0.03
CTCFL-204ENST00000422869 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 SPATA31D1Q6ZQQ2 1576 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 LARGE1O95461 756 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
CTCFL-204ENST00000422869 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 SPC24Q8NBT2 197 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 DNM1Q05193 864 aaKnown RBP15.22■□□□□ 0.03
CTCFL-204ENST00000422869 SMC3Q9UQE7 1217 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 CRYBG1Q9Y4K1 1723 aa15.22■□□□□ 0.03
CTCFL-204ENST00000422869 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
CTCFL-204ENST00000422869 OVOS2A0A0J9YW53 1432 aa15.21■□□□□ 0.03
CTCFL-204ENST00000422869 OVOS2Q6IE36 1432 aa15.21■□□□□ 0.03
CTCFL-204ENST00000422869 TPM3P06753 285 aa15.21■□□□□ 0.03
CTCFL-204ENST00000422869 MTHFSDQ2M296 383 aaKnown RBP15.21■□□□□ 0.03
CTCFL-204ENST00000422869 CACNA1FO60840 1977 aa15.21■□□□□ 0.03
CTCFL-204ENST00000422869 DTNBO60941 627 aa15.21■□□□□ 0.02
CTCFL-204ENST00000422869 U2AF2P26368 475 aaKnown RBP eCLIP15.21■□□□□ 0.02
CTCFL-204ENST00000422869 CHAF1AQ13111 956 aaPredicted RBP15.21■□□□□ 0.02
CTCFL-204ENST00000422869 STK31Q9BXU1 1019 aa15.21■□□□□ 0.02
CTCFL-204ENST00000422869 MTMR6Q9Y217 621 aa15.21■□□□□ 0.02
CTCFL-204ENST00000422869 PRR36Q9H6K5 1346 aa15.21■□□□□ 0.02
CTCFL-204ENST00000422869 METP08581 1390 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 CPA1P15085 419 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 MAP3K19Q56UN5 1328 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 KIF20AO95235 890 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 TXNDC2Q86VQ3 553 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
CTCFL-204ENST00000422869 GJB2P29033 226 aa15.19■□□□□ 0.02
CTCFL-204ENST00000422869 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
CTCFL-204ENST00000422869 LRRC37A3O60309 1634 aa15.19■□□□□ 0.02
CTCFL-204ENST00000422869 DHX37Q8IY37 1157 aaKnown RBP15.19■□□□□ 0.02
CTCFL-204ENST00000422869 SSH3Q8TE77 659 aa15.19■□□□□ 0.02
CTCFL-204ENST00000422869 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
CTCFL-204ENST00000422869 GOLGA6L6A8MZA4 724 aa15.18■□□□□ 0.02
CTCFL-204ENST00000422869 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
CTCFL-204ENST00000422869 PTGS1P23219 599 aa15.18■□□□□ 0.02
CTCFL-204ENST00000422869 CCDC83Q8IWF9 413 aa15.18■□□□□ 0.02
CTCFL-204ENST00000422869 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
CTCFL-204ENST00000422869 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
CTCFL-204ENST00000422869 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
CTCFL-204ENST00000422869 ST3GAL1Q11201 340 aa15.17■□□□□ 0.02
CTCFL-204ENST00000422869 NECTIN2Q92692 538 aa15.17■□□□□ 0.02
CTCFL-204ENST00000422869 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
CTCFL-204ENST00000422869 NCBP1Q09161 790 aaKnown RBP15.17■□□□□ 0.02
CTCFL-204ENST00000422869 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
CTCFL-204ENST00000422869 FAM200AQ8TCP9 573 aa15.17■□□□□ 0.02
CTCFL-204ENST00000422869 CWC27Q6UX04 472 aaKnown RBP15.16■□□□□ 0.02
CTCFL-204ENST00000422869 MRVI1Q9Y6F6 885 aa15.16■□□□□ 0.02
CTCFL-204ENST00000422869 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
CTCFL-204ENST00000422869 RAB11FIP3O75154 756 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 POLA2Q14181 598 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 RHPN1Q8TCX5 695 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 SURF6O75683 361 aaKnown RBP15.15■□□□□ 0.02
CTCFL-204ENST00000422869 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms