RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 HOXB7P09629 217 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 RXRBP28702 533 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 LRP10Q7Z4F1 713 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 EXOC6Q8TAG9 804 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 CRBNQ96SW2 442 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 KRT27Q7Z3Y8 459 aa11.47□□□□□ -0.57
HPS4-204ENST00000422379 PHAXQ9H814 394 aaKnown RBP11.47□□□□□ -0.57
HPS4-204ENST00000422379 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
HPS4-204ENST00000422379 SOS1Q07889 1333 aaPredicted RBP11.47□□□□□ -0.57
HPS4-204ENST00000422379 SNRPA1P09661 255 aaKnown RBP11.47□□□□□ -0.57
HPS4-204ENST00000422379 CCDC30Q5VVM6 783 aa11.47□□□□□ -0.57
HPS4-204ENST00000422379 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
HPS4-204ENST00000422379 SBF2Q86WG5 1849 aa11.46□□□□□ -0.57
HPS4-204ENST00000422379 NBPF26B4DH59 902 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 KCNQ4P56696 695 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 NBPF14Q5TI25 921 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.58
HPS4-204ENST00000422379 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 NBPF15Q8N660 670 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 TJP1Q07157 1748 aa11.46□□□□□ -0.58
HPS4-204ENST00000422379 KIF16BQ96L93 1317 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 BTAF1O14981 1849 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
HPS4-204ENST00000422379 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 LAMB4A4D0S4 1761 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 F6X3S4 739 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 A1BGP04217 495 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 ITPK1Q13572 414 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 COG6Q9Y2V7 657 aa11.45□□□□□ -0.58
HPS4-204ENST00000422379 ABCC4O15439 1325 aa11.44□□□□□ -0.58
HPS4-204ENST00000422379 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
HPS4-204ENST00000422379 FLIIQ13045 1269 aa11.44□□□□□ -0.58
HPS4-204ENST00000422379 PDE3AQ14432 1141 aa11.44□□□□□ -0.58
HPS4-204ENST00000422379 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
HPS4-204ENST00000422379 LOC102724428A0A0B4J2F2 783 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 SIK1P57059 783 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
HPS4-204ENST00000422379 TMEM57Q8N5G2 664 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 STK31Q9BXU1 1019 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 CYP19A1P11511 503 aaPredicted RBP11.43□□□□□ -0.58
HPS4-204ENST00000422379 MYL6BP14649 208 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
HPS4-204ENST00000422379 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
HPS4-204ENST00000422379 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
HPS4-204ENST00000422379 DDX21Q9NR30 783 aaKnown RBP eCLIP11.43□□□□□ -0.58
HPS4-204ENST00000422379 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
HPS4-204ENST00000422379 ADCY9O60503 1353 aa11.42□□□□□ -0.58
HPS4-204ENST00000422379 TRIM37O94972 964 aa11.42□□□□□ -0.58
HPS4-204ENST00000422379 FAM196AQ6ZSG2 479 aa11.41□□□□□ -0.58
HPS4-204ENST00000422379 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
HPS4-204ENST00000422379 PTPRCP08575 1304 aa11.41□□□□□ -0.58
HPS4-204ENST00000422379 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
HPS4-204ENST00000422379 FKBP5Q13451 457 aaPredicted RBP11.41□□□□□ -0.58
HPS4-204ENST00000422379 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
HPS4-204ENST00000422379 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
HPS4-204ENST00000422379 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
HPS4-204ENST00000422379 INTS5Q6P9B9 1019 aaKnown RBP11.4□□□□□ -0.58
HPS4-204ENST00000422379 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
HPS4-204ENST00000422379 LINC00116Q8NCU8 138 aa11.4□□□□□ -0.58
HPS4-204ENST00000422379 XAGE3Q8WTP9 111 aa11.4□□□□□ -0.58
HPS4-204ENST00000422379 ZBTB1Q9Y2K1 713 aa11.4□□□□□ -0.58
HPS4-204ENST00000422379 PI4KAP2A4QPH2 592 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
HPS4-204ENST00000422379 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 SMIM5Q71RC9 77 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 COPS6Q7L5N1 327 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 AMIGO3Q86WK7 504 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 PI4KAP1Q8N8J0 262 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 API5Q9BZZ5 524 aaKnown RBP11.39□□□□□ -0.59
HPS4-204ENST00000422379 LRRC4BQ9NT99 713 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 HYPKQ9NX55 129 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
HPS4-204ENST00000422379 ITPRIPQ8IWB1 547 aa11.39□□□□□ -0.59
HPS4-204ENST00000422379 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
HPS4-204ENST00000422379 LY75O60449 1722 aa11.38□□□□□ -0.59
HPS4-204ENST00000422379 COL5A3P25940 1745 aaPredicted RBP11.38□□□□□ -0.59
HPS4-204ENST00000422379 RREB1Q92766 1687 aa11.38□□□□□ -0.59
HPS4-204ENST00000422379 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
HPS4-204ENST00000422379 PROM2Q8N271 834 aa11.38□□□□□ -0.59
HPS4-204ENST00000422379 CACNA1FO60840 1977 aa11.38□□□□□ -0.59
HPS4-204ENST00000422379 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
HPS4-204ENST00000422379 ZNF831Q5JPB2 1677 aa11.37□□□□□ -0.59
HPS4-204ENST00000422379 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
HPS4-204ENST00000422379 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
HPS4-204ENST00000422379 ZBTB7BO15156 539 aaPredicted RBP11.37□□□□□ -0.59
HPS4-204ENST00000422379 STARD3NLO95772 234 aa11.37□□□□□ -0.59
HPS4-204ENST00000422379 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
HPS4-204ENST00000422379 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
HPS4-204ENST00000422379 BEND3Q5T5X7 828 aa11.36□□□□□ -0.59
HPS4-204ENST00000422379 KSR2Q6VAB6 950 aa11.36□□□□□ -0.59
HPS4-204ENST00000422379 ZBTB40Q9NUA8 1239 aa11.36□□□□□ -0.59
HPS4-204ENST00000422379 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
HPS4-204ENST00000422379 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
HPS4-204ENST00000422379 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
HPS4-204ENST00000422379 DNAAF4Q8WXU2 420 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms