RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 COL15A1P39059 1388 aa23.65■■□□□ 1.38
HDLBP-208ENST00000422080 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.38
HDLBP-208ENST00000422080 A0A0G2JLW4 131 aa23.64■■□□□ 1.37
HDLBP-208ENST00000422080 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.37
HDLBP-208ENST00000422080 A0A087WZG4 1122 aa23.63■■□□□ 1.37
HDLBP-208ENST00000422080 EIF5P55010 431 aaKnown RBP23.63■■□□□ 1.37
HDLBP-208ENST00000422080 RALBP1Q15311 655 aa23.63■■□□□ 1.37
HDLBP-208ENST00000422080 WWC3Q9ULE0 1092 aa23.63■■□□□ 1.37
HDLBP-208ENST00000422080 POLRMTO00411 1230 aaKnown RBP23.62■■□□□ 1.37
HDLBP-208ENST00000422080 KCNQ3O43525 872 aa23.62■■□□□ 1.37
HDLBP-208ENST00000422080 NEFMP07197 916 aa23.62■■□□□ 1.37
HDLBP-208ENST00000422080 DPEP1P16444 411 aa23.62■■□□□ 1.37
HDLBP-208ENST00000422080 MCM10Q7L590 875 aa23.62■■□□□ 1.37
HDLBP-208ENST00000422080 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
HDLBP-208ENST00000422080 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
HDLBP-208ENST00000422080 KCNA3P22001 575 aa23.59■■□□□ 1.37
HDLBP-208ENST00000422080 IL6STP40189 918 aaPredicted RBP23.59■■□□□ 1.37
HDLBP-208ENST00000422080 NFIXQ14938 502 aa23.59■■□□□ 1.37
HDLBP-208ENST00000422080 PLEKHF1Q96S99 279 aa23.59■■□□□ 1.37
HDLBP-208ENST00000422080 PNNQ9H307 717 aaKnown RBP23.59■■□□□ 1.37
HDLBP-208ENST00000422080 UBR2Q8IWV8 1755 aa23.59■■□□□ 1.37
HDLBP-208ENST00000422080 DDX10Q13206 875 aaKnown RBP23.58■■□□□ 1.37
HDLBP-208ENST00000422080 DCTN1Q14203 1278 aa23.58■■□□□ 1.37
HDLBP-208ENST00000422080 BCS1LQ9Y276 419 aa23.58■■□□□ 1.37
HDLBP-208ENST00000422080 TAF7Q15545 349 aaPredicted RBP23.57■■□□□ 1.36
HDLBP-208ENST00000422080 VIRMAQ69YN4 1812 aaKnown RBP23.56■■□□□ 1.36
HDLBP-208ENST00000422080 KIF13BQ9NQT8 1826 aa23.56■■□□□ 1.36
HDLBP-208ENST00000422080 A1BGP04217 495 aa23.56■■□□□ 1.36
HDLBP-208ENST00000422080 PIM2Q9P1W9 311 aa23.56■■□□□ 1.36
HDLBP-208ENST00000422080 SNRPA1P09661 255 aaKnown RBP23.55■■□□□ 1.36
HDLBP-208ENST00000422080 USP16Q9Y5T5 823 aa23.55■■□□□ 1.36
HDLBP-208ENST00000422080 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
HDLBP-208ENST00000422080 SERPINB2P05120 415 aa23.54■■□□□ 1.36
HDLBP-208ENST00000422080 NFE2L2Q16236 605 aa23.54■■□□□ 1.36
HDLBP-208ENST00000422080 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
HDLBP-208ENST00000422080 GIGYF1O75420 1035 aaPredicted RBP23.52■■□□□ 1.36
HDLBP-208ENST00000422080 C1QTNF8P60827 252 aa23.52■■□□□ 1.36
HDLBP-208ENST00000422080 DALRD3Q5D0E6 543 aaKnown RBP23.52■■□□□ 1.36
HDLBP-208ENST00000422080 PNISRQ8TF01 805 aaKnown RBP23.52■■□□□ 1.36
HDLBP-208ENST00000422080 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
HDLBP-208ENST00000422080 ADCY9O60503 1353 aa23.52■■□□□ 1.36
HDLBP-208ENST00000422080 ATP10DQ9P241 1426 aa23.51■■□□□ 1.35
HDLBP-208ENST00000422080 KIAA1551Q9HCM1 1747 aa23.51■■□□□ 1.35
HDLBP-208ENST00000422080 CHRNA5P30532 468 aa23.51■■□□□ 1.35
HDLBP-208ENST00000422080 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
HDLBP-208ENST00000422080 ZNF330Q9Y3S2 320 aaPredicted RBP23.51■■□□□ 1.35
HDLBP-208ENST00000422080 MAPK8IP3Q9UPT6 1336 aa23.51■■□□□ 1.35
HDLBP-208ENST00000422080 PRAMEF22A3QJZ6 481 aa23.5■■□□□ 1.35
HDLBP-208ENST00000422080 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
HDLBP-208ENST00000422080 BICDL1Q6ZP65 573 aa23.49■■□□□ 1.35
HDLBP-208ENST00000422080 MIS18AQ9NYP9 233 aa23.49■■□□□ 1.35
HDLBP-208ENST00000422080 CAMTA2O94983 1202 aa23.48■■□□□ 1.35
HDLBP-208ENST00000422080 MYBBP1AQ9BQG0 1328 aaKnown RBP23.48■■□□□ 1.35
HDLBP-208ENST00000422080 GPBP1L1Q9HC44 474 aaPredicted RBP23.47■■□□□ 1.35
HDLBP-208ENST00000422080 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
HDLBP-208ENST00000422080 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
HDLBP-208ENST00000422080 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
HDLBP-208ENST00000422080 SETDB2Q96T68 719 aa23.45■■□□□ 1.34
HDLBP-208ENST00000422080 NBPF26B4DH59 902 aa23.44■■□□□ 1.34
HDLBP-208ENST00000422080 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
HDLBP-208ENST00000422080 NBPF10Q6P3W6 841 aaKnown RBP23.44■■□□□ 1.34
HDLBP-208ENST00000422080 NBPF15Q8N660 670 aa23.44■■□□□ 1.34
HDLBP-208ENST00000422080 PDZRN3Q9UPQ7 1066 aa23.44■■□□□ 1.34
HDLBP-208ENST00000422080 CARMIL3Q8ND23 1372 aa23.43■■□□□ 1.34
HDLBP-208ENST00000422080 H0YIN7 160 aa23.43■■□□□ 1.34
HDLBP-208ENST00000422080 RGL2O15211 777 aa23.43■■□□□ 1.34
HDLBP-208ENST00000422080 C2CD5Q86YS7 1000 aa23.43■■□□□ 1.34
HDLBP-208ENST00000422080 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
HDLBP-208ENST00000422080 BRIP1Q9BX63 1249 aa23.43■■□□□ 1.34
HDLBP-208ENST00000422080 RIPK4P57078 832 aa23.42■■□□□ 1.34
HDLBP-208ENST00000422080 EIF4A1P60842 406 aaKnown RBP23.42■■□□□ 1.34
HDLBP-208ENST00000422080 PDE6BP35913 854 aa23.41■■□□□ 1.34
HDLBP-208ENST00000422080 PRR5LQ6MZQ0 368 aa23.41■■□□□ 1.34
HDLBP-208ENST00000422080 TTLL6Q8N841 843 aa23.41■■□□□ 1.34
HDLBP-208ENST00000422080 ZNF526Q8TF50 670 aaPredicted RBP23.41■■□□□ 1.34
HDLBP-208ENST00000422080 ZNF652Q9Y2D9 606 aa23.41■■□□□ 1.34
HDLBP-208ENST00000422080 NRXN2Q9P2S2 1712 aa23.41■■□□□ 1.34
HDLBP-208ENST00000422080 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
HDLBP-208ENST00000422080 LMOD3Q0VAK6 560 aa23.39■■□□□ 1.33
HDLBP-208ENST00000422080 C9orf131Q5VYM1 1079 aa23.39■■□□□ 1.33
HDLBP-208ENST00000422080 BABAM1Q9NWV8 329 aa23.39■■□□□ 1.33
HDLBP-208ENST00000422080 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
HDLBP-208ENST00000422080 BRCA1P38398 1863 aaKnown RBP23.38■■□□□ 1.33
HDLBP-208ENST00000422080 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
HDLBP-208ENST00000422080 SCN7AQ01118 1682 aa23.36■■□□□ 1.33
HDLBP-208ENST00000422080 ST5P78524 1137 aa23.36■■□□□ 1.33
HDLBP-208ENST00000422080 WDR43Q15061 677 aaKnown RBP eCLIP23.36■■□□□ 1.33
HDLBP-208ENST00000422080 TSPYL4Q9UJ04 414 aa23.36■■□□□ 1.33
HDLBP-208ENST00000422080 AFDNP55196 1824 aaKnown RBP23.36■■□□□ 1.33
HDLBP-208ENST00000422080 NPHP1O15259 732 aa23.35■■□□□ 1.33
HDLBP-208ENST00000422080 CCDC24Q8N4L8 307 aa23.35■■□□□ 1.33
HDLBP-208ENST00000422080 RUNDC1Q96C34 613 aa23.35■■□□□ 1.33
HDLBP-208ENST00000422080 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
HDLBP-208ENST00000422080 NBPF5PQ86XG9 351 aaPredicted RBP23.34■■□□□ 1.33
HDLBP-208ENST00000422080 ZNF622Q969S3 477 aaKnown RBP eCLIP23.34■■□□□ 1.335e-8■□□□□ 8.1
HDLBP-208ENST00000422080 ERVV-1B6SEH8 477 aa23.33■■□□□ 1.33
HDLBP-208ENST00000422080 KIF3CO14782 793 aa23.33■■□□□ 1.33
HDLBP-208ENST00000422080 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
HDLBP-208ENST00000422080 CCDC146Q8IYE0 955 aa23.33■■□□□ 1.33
HDLBP-208ENST00000422080 RNF181Q9P0P0 153 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms