RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 CD163L1Q9NR16 1453 aa8.06□□□□□ -1.12
HDAC8-212ENST00000421523 CGNL1Q0VF96 1302 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 DLEC1Q9Y238 1755 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 CA12O43570 354 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 HOXC9P31274 260 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC8-212ENST00000421523 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 L3MBTL2Q969R5 705 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 TMOD3Q9NYL9 352 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 SCN4AP35499 1836 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 ADAMTSL1Q8N6G6 1762 aa8.05□□□□□ -1.12
HDAC8-212ENST00000421523 POLRMTO00411 1230 aaKnown RBP8.04□□□□□ -1.12
HDAC8-212ENST00000421523 AMPHP49418 695 aa8.04□□□□□ -1.12
HDAC8-212ENST00000421523 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
HDAC8-212ENST00000421523 DDX21Q9NR30 783 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC8-212ENST00000421523 SBNO2Q9Y2G9 1366 aa8.04□□□□□ -1.12
HDAC8-212ENST00000421523 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 COL5A3P25940 1745 aaPredicted RBP8.03□□□□□ -1.12
HDAC8-212ENST00000421523 KDRP35968 1356 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 C21orf2O43822 256 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 FBLN1P23142 703 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 EPHX2P34913 555 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 C1QBPQ07021 282 aaKnown RBP8.03□□□□□ -1.12
HDAC8-212ENST00000421523 SLC17A8Q8NDX2 589 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 SIN3AQ96ST3 1273 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 RBM42Q9BTD8 480 aaKnown RBP8.03□□□□□ -1.12
HDAC8-212ENST00000421523 TAOK3Q9H2K8 898 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 HACL1Q9UJ83 578 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 CENPFP49454 3210 aa8.03□□□□□ -1.12
HDAC8-212ENST00000421523 USP42Q9H9J4 1324 aaKnown RBP8.03□□□□□ -1.12
HDAC8-212ENST00000421523 UNC80Q8N2C7 3258 aa8.02□□□□□ -1.12
HDAC8-212ENST00000421523 BRCA2P51587 3418 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 RPS6KA4O75676 772 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 MAP2K2P36507 400 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 CIAPIN1Q6FI81 312 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 L3MBTL3Q96JM7 780 aaPredicted RBP8.02□□□□□ -1.13
HDAC8-212ENST00000421523 SLC4A9Q96Q91 983 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 ATG3Q9NT62 314 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 FER1L6Q2WGJ9 1857 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 SMG6Q86US8 1419 aaKnown RBP8.02□□□□□ -1.13
HDAC8-212ENST00000421523 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 CNTNAP4Q9C0A0 1308 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 ZNF541Q9H0D2 1346 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 ADAMTS7Q9UKP4 1686 aa8.02□□□□□ -1.13
HDAC8-212ENST00000421523 RANBP2P49792 3224 aaKnown RBP8.01□□□□□ -1.13
HDAC8-212ENST00000421523 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
HDAC8-212ENST00000421523 CARMIL3Q8ND23 1372 aa8.01□□□□□ -1.13
HDAC8-212ENST00000421523 TRAF5O00463 557 aa8.01□□□□□ -1.13
HDAC8-212ENST00000421523 BRPF1P55201 1214 aaPredicted RBP8.01□□□□□ -1.13
HDAC8-212ENST00000421523 MYH14Q7Z406 1995 aaKnown RBP8.01□□□□□ -1.13
HDAC8-212ENST00000421523 HTTP42858 3142 aa8□□□□□ -1.13
HDAC8-212ENST00000421523 H0YIN7 160 aa8□□□□□ -1.13
HDAC8-212ENST00000421523 PNMA8AQ86V59 439 aaPredicted RBP8□□□□□ -1.13
HDAC8-212ENST00000421523 ZNF622Q969S3 477 aaKnown RBP eCLIP8□□□□□ -1.13
HDAC8-212ENST00000421523 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
HDAC8-212ENST00000421523 RC3H1Q5TC82 1133 aaKnown RBP7.99□□□□□ -1.13
HDAC8-212ENST00000421523 CST9Q5W186 159 aa7.99□□□□□ -1.13
HDAC8-212ENST00000421523 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
HDAC8-212ENST00000421523 HPS5Q9UPZ3 1129 aa7.99□□□□□ -1.13
HDAC8-212ENST00000421523 TRIOBPQ9H2D6 2365 aa7.99□□□□□ -1.13
HDAC8-212ENST00000421523 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
HDAC8-212ENST00000421523 COL11A2P13942 1736 aaPredicted RBP7.98□□□□□ -1.13
HDAC8-212ENST00000421523 EDC4Q6P2E9 1401 aaKnown RBP7.98□□□□□ -1.13
HDAC8-212ENST00000421523 TM4SF1P30408 202 aa7.98□□□□□ -1.13
HDAC8-212ENST00000421523 CRKLP46109 303 aaKnown RBP7.98□□□□□ -1.13
HDAC8-212ENST00000421523 RRS1Q15050 365 aaKnown RBP7.98□□□□□ -1.13
HDAC8-212ENST00000421523 USPL1Q5W0Q7 1092 aa7.98□□□□□ -1.13
HDAC8-212ENST00000421523 ZIC5Q96T25 663 aa7.98□□□□□ -1.13
HDAC8-212ENST00000421523 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
HDAC8-212ENST00000421523 CACNA1SQ13698 1873 aa7.98□□□□□ -1.13
HDAC8-212ENST00000421523 ZPR1O75312 459 aa7.97□□□□□ -1.13
HDAC8-212ENST00000421523 NFIXQ14938 502 aa7.97□□□□□ -1.13
HDAC8-212ENST00000421523 BICDL1Q6ZP65 573 aa7.97□□□□□ -1.13
HDAC8-212ENST00000421523 HDGFL2Q7Z4V5 671 aaPredicted RBP7.97□□□□□ -1.13
HDAC8-212ENST00000421523 NRXN2Q9P2S2 1712 aa7.97□□□□□ -1.13
HDAC8-212ENST00000421523 RTL1A6NKG5 1358 aa7.97□□□□□ -1.13
HDAC8-212ENST00000421523 ROCK2O75116 1388 aaKnown RBP7.97□□□□□ -1.13
HDAC8-212ENST00000421523 ZNF831Q5JPB2 1677 aa7.96□□□□□ -1.13
HDAC8-212ENST00000421523 SERPINB2P05120 415 aa7.96□□□□□ -1.14
HDAC8-212ENST00000421523 NEUROD1Q13562 356 aa7.96□□□□□ -1.14
HDAC8-212ENST00000421523 NKX1-1Q15270 411 aaPredicted RBP7.96□□□□□ -1.14
HDAC8-212ENST00000421523 CTU1Q7Z7A3 348 aaKnown RBP7.96□□□□□ -1.14
HDAC8-212ENST00000421523 SAPCD2Q86UD0 394 aa7.96□□□□□ -1.14
HDAC8-212ENST00000421523 COG3Q96JB2 828 aa7.96□□□□□ -1.14
HDAC8-212ENST00000421523 A0A1W2PP64 1363 aa7.96□□□□□ -1.14
HDAC8-212ENST00000421523 CEP290O15078 2479 aa7.95□□□□□ -1.14
HDAC8-212ENST00000421523 PTCD1O75127 700 aaKnown RBP7.95□□□□□ -1.14
HDAC8-212ENST00000421523 CELF2O95319 508 aaKnown RBP7.95□□□□□ -1.14
HDAC8-212ENST00000421523 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
HDAC8-212ENST00000421523 ZNF408Q9H9D4 720 aa7.95□□□□□ -1.14
HDAC8-212ENST00000421523 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
HDAC8-212ENST00000421523 COLQQ9Y215 455 aaPredicted RBP7.95□□□□□ -1.14
HDAC8-212ENST00000421523 ANKRD31Q8N7Z5 1873 aa7.95□□□□□ -1.14
HDAC8-212ENST00000421523 VCANP13611 3396 aa7.95□□□□□ -1.14
HDAC8-212ENST00000421523 SCN11AQ9UI33 1791 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 SLX4Q8IY92 1834 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 TRPA1O75762 1119 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 HSP90AB2PQ58FF8 381 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 PRPF40BQ6NWY9 871 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms