RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 BRCA1P38398 1863 aaKnown RBP25.38■■□□□ 1.65
VARS2-202ENST00000421263 SENP3-EIF4A1A0A087X0R7 540 aa25.38■■□□□ 1.65
VARS2-202ENST00000421263 PPP2R1AP30153 589 aa25.38■■□□□ 1.65
VARS2-202ENST00000421263 TEFQ10587 303 aa25.38■■□□□ 1.65
VARS2-202ENST00000421263 TTC5Q8N0Z6 440 aa25.38■■□□□ 1.65
VARS2-202ENST00000421263 CEMIPQ8WUJ3 1361 aa25.38■■□□□ 1.65
VARS2-202ENST00000421263 COL15A1P39059 1388 aa25.37■■□□□ 1.65
VARS2-202ENST00000421263 ZNF790Q6PG37 636 aa25.37■■□□□ 1.65
VARS2-202ENST00000421263 BCL2L12Q9HB09 334 aa25.37■■□□□ 1.65
VARS2-202ENST00000421263 SIPA1L3O60292 1781 aaPredicted RBP25.36■■□□□ 1.65
VARS2-202ENST00000421263 PRKAR2BP31323 418 aa25.36■■□□□ 1.65
VARS2-202ENST00000421263 ZNF496Q96IT1 587 aaPredicted RBP25.36■■□□□ 1.65
VARS2-202ENST00000421263 PIM2Q9P1W9 311 aa25.36■■□□□ 1.65
VARS2-202ENST00000421263 NUDCQ9Y266 331 aa25.36■■□□□ 1.65
VARS2-202ENST00000421263 FCHSD2O94868 740 aa25.35■■□□□ 1.65
VARS2-202ENST00000421263 EIF5P55010 431 aaKnown RBP25.35■■□□□ 1.65
VARS2-202ENST00000421263 HEG1Q9ULI3 1381 aa25.34■■□□□ 1.65
VARS2-202ENST00000421263 STARD3NLO95772 234 aa25.34■■□□□ 1.65
VARS2-202ENST00000421263 NFIXQ14938 502 aa25.34■■□□□ 1.65
VARS2-202ENST00000421263 TEX13AQ9BXU3 409 aaPredicted RBP25.34■■□□□ 1.65
VARS2-202ENST00000421263 CANXP27824 592 aaKnown RBP25.33■■□□□ 1.65
VARS2-202ENST00000421263 ARHGAP27Q6ZUM4 889 aa25.33■■□□□ 1.65
VARS2-202ENST00000421263 ZNF526Q8TF50 670 aaPredicted RBP25.31■■□□□ 1.64
VARS2-202ENST00000421263 ARFGEF1Q9Y6D6 1849 aa25.3■■□□□ 1.64
VARS2-202ENST00000421263 NRXN2Q9P2S2 1712 aa25.3■■□□□ 1.64
VARS2-202ENST00000421263 U2AF1L5P0DN76 240 aaPredicted RBP25.3■■□□□ 1.64
VARS2-202ENST00000421263 U2AF1Q01081 240 aaKnown RBP eCLIP25.3■■□□□ 1.64
VARS2-202ENST00000421263 DALRD3Q5D0E6 543 aaKnown RBP25.3■■□□□ 1.64
VARS2-202ENST00000421263 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
VARS2-202ENST00000421263 A0A087WZG4 1122 aa25.29■■□□□ 1.64
VARS2-202ENST00000421263 CHRNA5P30532 468 aa25.29■■□□□ 1.64
VARS2-202ENST00000421263 AFDNP55196 1824 aaKnown RBP25.28■■□□□ 1.64
VARS2-202ENST00000421263 BTBD11A6QL63 1104 aa25.28■■□□□ 1.64
VARS2-202ENST00000421263 KCNQ3O43525 872 aa25.28■■□□□ 1.64
VARS2-202ENST00000421263 SERPINB2P05120 415 aa25.28■■□□□ 1.64
VARS2-202ENST00000421263 IL6STP40189 918 aaPredicted RBP25.27■■□□□ 1.64
VARS2-202ENST00000421263 KIF3CO14782 793 aa25.26■■□□□ 1.63
VARS2-202ENST00000421263 HTATSF1O43719 755 aaKnown RBP25.25■■□□□ 1.63
VARS2-202ENST00000421263 A1BGP04217 495 aa25.24■■□□□ 1.63
VARS2-202ENST00000421263 RTF1Q92541 710 aaKnown RBP25.23■■□□□ 1.63
VARS2-202ENST00000421263 MCM10Q7L590 875 aa25.22■■□□□ 1.63
VARS2-202ENST00000421263 TBC1D2BQ9UPU7 963 aa25.22■■□□□ 1.63
VARS2-202ENST00000421263 USP16Q9Y5T5 823 aa25.22■■□□□ 1.63
VARS2-202ENST00000421263 C9orf131Q5VYM1 1079 aa25.21■■□□□ 1.63
VARS2-202ENST00000421263 TBC1D9BQ66K14 1250 aa25.21■■□□□ 1.63
VARS2-202ENST00000421263 CEP350Q5VT06 3117 aa25.21■■□□□ 1.63
VARS2-202ENST00000421263 DCTN1Q14203 1278 aa25.19■■□□□ 1.62
VARS2-202ENST00000421263 BICDL1Q6ZP65 573 aa25.19■■□□□ 1.62
VARS2-202ENST00000421263 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
VARS2-202ENST00000421263 PRAMEF22A3QJZ6 481 aa25.17■■□□□ 1.62
VARS2-202ENST00000421263 CAMTA2O94983 1202 aa25.17■■□□□ 1.62
VARS2-202ENST00000421263 SNRPA1P09661 255 aaKnown RBP25.17■■□□□ 1.62
VARS2-202ENST00000421263 HSPA6P17066 643 aa25.17■■□□□ 1.62
VARS2-202ENST00000421263 DLEC1Q9Y238 1755 aa25.17■■□□□ 1.62
VARS2-202ENST00000421263 SCN7AQ01118 1682 aa25.17■■□□□ 1.62
VARS2-202ENST00000421263 SBF1O95248 1867 aa25.16■■□□□ 1.62
VARS2-202ENST00000421263 C2CD5Q86YS7 1000 aa25.16■■□□□ 1.62
VARS2-202ENST00000421263 TTLL6Q8N841 843 aa25.16■■□□□ 1.62
VARS2-202ENST00000421263 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
VARS2-202ENST00000421263 H0YIN7 160 aa25.15■■□□□ 1.62
VARS2-202ENST00000421263 TAF7Q15545 349 aaPredicted RBP25.15■■□□□ 1.62
VARS2-202ENST00000421263 PLEKHF1Q96S99 279 aa25.15■■□□□ 1.62
VARS2-202ENST00000421263 BRIP1Q9BX63 1249 aa25.15■■□□□ 1.62
VARS2-202ENST00000421263 PDZRN3Q9UPQ7 1066 aa25.15■■□□□ 1.62
VARS2-202ENST00000421263 PRR5LQ6MZQ0 368 aa25.14■■□□□ 1.62
VARS2-202ENST00000421263 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.62
VARS2-202ENST00000421263 NMRK2Q9NPI5 230 aa25.14■■□□□ 1.62
VARS2-202ENST00000421263 RNF181Q9P0P0 153 aa25.14■■□□□ 1.62
VARS2-202ENST00000421263 TOMM70O94826 608 aa25.13■■□□□ 1.61
VARS2-202ENST00000421263 DZIP3Q86Y13 1208 aaKnown RBP25.13■■□□□ 1.61
VARS2-202ENST00000421263 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
VARS2-202ENST00000421263 ANKRD31Q8N7Z5 1873 aa25.12■■□□□ 1.61
VARS2-202ENST00000421263 PDE6BP35913 854 aa25.11■■□□□ 1.61
VARS2-202ENST00000421263 PIP4K2AP48426 406 aaPredicted RBP25.11■■□□□ 1.61
VARS2-202ENST00000421263 CLEC4GQ6UXB4 293 aa25.11■■□□□ 1.61
VARS2-202ENST00000421263 NBPF26B4DH59 902 aa25.1■■□□□ 1.61
VARS2-202ENST00000421263 NBPF10Q6P3W6 841 aaKnown RBP25.1■■□□□ 1.61
VARS2-202ENST00000421263 NBPF15Q8N660 670 aa25.1■■□□□ 1.61
VARS2-202ENST00000421263 BCORQ6W2J9 1755 aa25.09■■□□□ 1.61
VARS2-202ENST00000421263 NEFMP07197 916 aa25.09■■□□□ 1.61
VARS2-202ENST00000421263 PRELPP51888 382 aa25.09■■□□□ 1.61
VARS2-202ENST00000421263 RASSF7Q02833 373 aa25.09■■□□□ 1.61
VARS2-202ENST00000421263 MIS18AQ9NYP9 233 aa25.09■■□□□ 1.61
VARS2-202ENST00000421263 DLG5Q8TDM6 1919 aa25.08■■□□□ 1.61
VARS2-202ENST00000421263 RGL2O15211 777 aa25.08■■□□□ 1.61
VARS2-202ENST00000421263 CCDC24Q8N4L8 307 aa25.08■■□□□ 1.61
VARS2-202ENST00000421263 KDM2BQ8NHM5 1336 aa25.08■■□□□ 1.6
VARS2-202ENST00000421263 ZC3H4Q9UPT8 1303 aaKnown RBP25.08■■□□□ 1.6
VARS2-202ENST00000421263 LMNB1P20700 586 aa25.07■■□□□ 1.6
VARS2-202ENST00000421263 NFE2L2Q16236 605 aa25.07■■□□□ 1.6
VARS2-202ENST00000421263 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
VARS2-202ENST00000421263 NFKBIEO00221 500 aa25.06■■□□□ 1.6
VARS2-202ENST00000421263 CNBD1Q8NA66 436 aa25.06■■□□□ 1.6
VARS2-202ENST00000421263 PNNQ9H307 717 aaKnown RBP25.06■■□□□ 1.6
VARS2-202ENST00000421263 ZNF622Q969S3 477 aaKnown RBP eCLIP25.05■■□□□ 1.6
VARS2-202ENST00000421263 RBM46Q8TBY0 533 aaKnown RBP25.04■■□□□ 1.6
VARS2-202ENST00000421263 ZNF652Q9Y2D9 606 aa25.04■■□□□ 1.6
VARS2-202ENST00000421263 SRGNP10124 158 aa25.03■■□□□ 1.6
VARS2-202ENST00000421263 ST5P78524 1137 aa25.03■■□□□ 1.6
VARS2-202ENST00000421263 RALBP1Q15311 655 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms