RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 CHMP3Q9Y3E7 222 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 HOMER1Q86YM7 354 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 CERS3Q8IU89 383 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 PLCD4Q9BRC7 762 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 FKBP5Q13451 457 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 TBC1D32Q96NH3 1257 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 ZNF521Q96K83 1311 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 TNS3Q68CZ2 1445 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 HDGFL1Q5TGJ6 251 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 CALCOCO1Q9P1Z2 691 aa11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 XRN1Q8IZH2 1706 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-207ENST00000420987 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.6
SEMA4D-207ENST00000420987 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 SLC4A2P04920 1241 aa11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 MST1RQ04912 1400 aa11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 TIGD1Q96MW7 591 aa11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 SETD1AO15047 1707 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-207ENST00000420987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 ARGLU1Q9NWB6 273 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 TNPO1Q92973 898 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 NGLY1Q96IV0 654 aa11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 KIF20BQ96Q89 1820 aa11.26□□□□□ -0.61
SEMA4D-207ENST00000420987 GTF2F1P35269 517 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEMA4D-207ENST00000420987 LEKR1Q6ZMV7 388 aa11.25□□□□□ -0.61
SEMA4D-207ENST00000420987 MNS1Q8NEH6 495 aa11.25□□□□□ -0.61
SEMA4D-207ENST00000420987 ZCRB1Q8TBF4 217 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-207ENST00000420987 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
SEMA4D-207ENST00000420987 HMMRO75330 724 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 IL2RBP14784 551 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 MCCP23508 829 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 SSFA2P28290 1259 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 GORABQ5T7V8 394 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 ERBB3P21860 1342 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 CHD2O14647 1828 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 ST18O60284 1047 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 TSPYL1Q9H0U9 437 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 SASS6Q6UVJ0 657 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
SEMA4D-207ENST00000420987 HSP90B2PQ58FF3 399 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 GOLGA6L19H0YKK7 550 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 EXOC5O00471 708 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 TPD52L1Q16890 204 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 BECN2A8MW95 431 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 NEXNQ0ZGT2 675 aa11.23□□□□□ -0.61
SEMA4D-207ENST00000420987 USP19O94966 1318 aa11.22□□□□□ -0.61
SEMA4D-207ENST00000420987 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-207ENST00000420987 BABAM1Q9NWV8 329 aa11.22□□□□□ -0.61
SEMA4D-207ENST00000420987 CHL1O00533 1208 aa11.22□□□□□ -0.61
SEMA4D-207ENST00000420987 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
SEMA4D-207ENST00000420987 FMN2Q9NZ56 1722 aa11.22□□□□□ -0.61
SEMA4D-207ENST00000420987 CCDC112Q8NEF3 446 aa11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 LRRC7Q96NW7 1537 aa11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 VAMP4O75379 141 aa11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 TRIM27P14373 513 aa11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 SOS2Q07890 1332 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-207ENST00000420987 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 DYNC1I1O14576 645 aa11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 BRD2P25440 801 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 DCAF5Q96JK2 942 aa11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-207ENST00000420987 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 PCDH11XQ9BZA7 1347 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 PCDH11YQ9BZA8 1340 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 CCT4P50991 539 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 GIMAP7Q8NHV1 300 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-207ENST00000420987 POLR3GO15318 223 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-207ENST00000420987 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms