RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SLC52A2Q9HAB3 445 aa10.88□□□□□ -0.67
SNCA-206ENST00000420646 KDM6AO15550 1401 aaPredicted RBP10.88□□□□□ -0.67
SNCA-206ENST00000420646 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
SNCA-206ENST00000420646 UNC5CLQ8IV45 518 aa10.88□□□□□ -0.67
SNCA-206ENST00000420646 DDX54Q8TDD1 881 aaKnown RBP10.88□□□□□ -0.67
SNCA-206ENST00000420646 FAM208AQ9UK61 1670 aaKnown RBP10.88□□□□□ -0.67
SNCA-206ENST00000420646 SOS1Q07889 1333 aaPredicted RBP10.88□□□□□ -0.67
SNCA-206ENST00000420646 TNS3Q68CZ2 1445 aa10.87□□□□□ -0.67
SNCA-206ENST00000420646 PDIA6Q15084 440 aa10.87□□□□□ -0.67
SNCA-206ENST00000420646 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
SNCA-206ENST00000420646 PA2G4Q9UQ80 394 aaKnown RBP10.87□□□□□ -0.67
SNCA-206ENST00000420646 C9orf78Q9NZ63 289 aaPredicted RBP10.87□□□□□ -0.67
SNCA-206ENST00000420646 IFNL2Q8IZJ0 200 aa10.87□□□□□ -0.67
SNCA-206ENST00000420646 SPG7Q9UQ90 795 aa10.87□□□□□ -0.67
SNCA-206ENST00000420646 ALS2Q96Q42 1657 aa10.86□□□□□ -0.67
SNCA-206ENST00000420646 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
SNCA-206ENST00000420646 NCAPD2Q15021 1401 aa10.86□□□□□ -0.67
SNCA-206ENST00000420646 MX1P20591 662 aa10.86□□□□□ -0.67
SNCA-206ENST00000420646 COPS6Q7L5N1 327 aa10.86□□□□□ -0.67
SNCA-206ENST00000420646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.86□□□□□ -0.67
SNCA-206ENST00000420646 LARP1Q6PKG0 1096 aaKnown RBP10.85□□□□□ -0.67
SNCA-206ENST00000420646 KLHDC4Q8TBB5 520 aa10.85□□□□□ -0.67
SNCA-206ENST00000420646 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
SNCA-206ENST00000420646 KSR2Q6VAB6 950 aa10.85□□□□□ -0.67
SNCA-206ENST00000420646 HSCBQ8IWL3 235 aa10.85□□□□□ -0.67
SNCA-206ENST00000420646 SSH3Q8TE77 659 aa10.85□□□□□ -0.67
SNCA-206ENST00000420646 XAGE3Q8WTP9 111 aa10.85□□□□□ -0.67
SNCA-206ENST00000420646 IBTKQ9P2D0 1353 aaPredicted RBP10.85□□□□□ -0.67
SNCA-206ENST00000420646 PHRF1Q9P1Y6 1649 aaKnown RBP10.85□□□□□ -0.67
SNCA-206ENST00000420646 HOXB7P09629 217 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 CABP4P57796 275 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 KIF1AQ12756 1690 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 IL25Q9H293 177 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 HEG1Q9ULI3 1381 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 IGKV5-2P06315 115 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 HSPA1LP34931 641 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 SIL1Q9H173 461 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 DDX21Q9NR30 783 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNCA-206ENST00000420646 LMO7Q8WWI1 1683 aa10.84□□□□□ -0.67
SNCA-206ENST00000420646 KAZALD1Q96I82 304 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 KDM3BQ7LBC6 1761 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 OS9Q13438 667 aaPredicted RBP10.83□□□□□ -0.68
SNCA-206ENST00000420646 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 SUCLG2Q96I99 432 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 DCAF5Q96JK2 942 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 SALL3Q9BXA9 1300 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 DCCP43146 1447 aa10.83□□□□□ -0.68
SNCA-206ENST00000420646 EVA1CP58658 441 aa10.82□□□□□ -0.68
SNCA-206ENST00000420646 MYD88Q99836 296 aa10.82□□□□□ -0.68
SNCA-206ENST00000420646 HSP90AB1P08238 724 aaKnown RBP10.82□□□□□ -0.68
SNCA-206ENST00000420646 BICC1Q9H694 974 aaKnown RBP10.82□□□□□ -0.68
SNCA-206ENST00000420646 HYPKQ9NX55 129 aa10.82□□□□□ -0.68
SNCA-206ENST00000420646 CAMTA1Q9Y6Y1 1673 aa10.82□□□□□ -0.68
SNCA-206ENST00000420646 XIRP1Q702N8 1843 aaKnown RBP10.82□□□□□ -0.68
SNCA-206ENST00000420646 SOS2Q07890 1332 aaPredicted RBP10.82□□□□□ -0.68
SNCA-206ENST00000420646 POLA2Q14181 598 aa10.82□□□□□ -0.68
SNCA-206ENST00000420646 ZCRB1Q8TBF4 217 aaKnown RBP10.82□□□□□ -0.68
SNCA-206ENST00000420646 STRCQ7RTU9 1775 aa10.81□□□□□ -0.68
SNCA-206ENST00000420646 HSP90AA1P07900 732 aaKnown RBP10.81□□□□□ -0.68
SNCA-206ENST00000420646 EPHA10Q5JZY3 1008 aa10.81□□□□□ -0.68
SNCA-206ENST00000420646 ZNF330Q9Y3S2 320 aaPredicted RBP10.81□□□□□ -0.68
SNCA-206ENST00000420646 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
SNCA-206ENST00000420646 COL18A1P39060 1754 aa10.81□□□□□ -0.68
SNCA-206ENST00000420646 WDR17Q8IZU2 1322 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 GRM8O00222 908 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 A1BGP04217 495 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 ARXQ96QS3 562 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 SNRPA1P09661 255 aaKnown RBP10.8□□□□□ -0.68
SNCA-206ENST00000420646 NOL8Q76FK4 1167 aaKnown RBP10.8□□□□□ -0.68
SNCA-206ENST00000420646 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 LINS1Q8NG48 757 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 ANO2Q9NQ90 1003 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 PALD1Q9ULE6 856 aa10.8□□□□□ -0.68
SNCA-206ENST00000420646 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 ERC2O15083 957 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 NBPF14Q5TI25 921 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
SNCA-206ENST00000420646 CASC1Q6TDU7 716 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 LRP10Q7Z4F1 713 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 BTG4Q9NY30 223 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNCA-206ENST00000420646 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 NEURL1BA8MQ27 555 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 CHMLP26374 656 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 TTLL7Q6ZT98 887 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
SNCA-206ENST00000420646 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
SNCA-206ENST00000420646 CPDO75976 1380 aa10.79□□□□□ -0.68
SNCA-206ENST00000420646 GOLGB1Q14789 3259 aaKnown RBP10.79□□□□□ -0.68
SNCA-206ENST00000420646 DDX58O95786 925 aaKnown RBP10.78□□□□□ -0.68
SNCA-206ENST00000420646 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 PI4K2BQ8TCG2 481 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 KIF1BPQ96EK5 621 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms