RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DBF4Q9UBU7 674 aaPredicted RBP18.21■□□□□ 0.51
SHMT1P1-201ENST00000419974 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
SHMT1P1-201ENST00000419974 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
SHMT1P1-201ENST00000419974 ITGB4P16144 1822 aa18.19■□□□□ 0.5
SHMT1P1-201ENST00000419974 RREB1Q92766 1687 aa18.19■□□□□ 0.5
SHMT1P1-201ENST00000419974 DZIP1LQ8IYY4 767 aaKnown RBP18.19■□□□□ 0.5
SHMT1P1-201ENST00000419974 ABCC4O15439 1325 aa18.19■□□□□ 0.5
SHMT1P1-201ENST00000419974 RGPD3A6NKT7 1758 aaPredicted RBP18.19■□□□□ 0.5
SHMT1P1-201ENST00000419974 RGPD4Q7Z3J3 1758 aa18.19■□□□□ 0.5
SHMT1P1-201ENST00000419974 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHMT1P1-201ENST00000419974 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
SHMT1P1-201ENST00000419974 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
SHMT1P1-201ENST00000419974 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
SHMT1P1-201ENST00000419974 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
SHMT1P1-201ENST00000419974 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
SHMT1P1-201ENST00000419974 ZNF831Q5JPB2 1677 aa18.17■□□□□ 0.5
SHMT1P1-201ENST00000419974 PDIA6Q15084 440 aa18.16■□□□□ 0.5
SHMT1P1-201ENST00000419974 LRP5O75197 1615 aa18.15■□□□□ 0.5
SHMT1P1-201ENST00000419974 FLIIQ13045 1269 aa18.15■□□□□ 0.5
SHMT1P1-201ENST00000419974 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
SHMT1P1-201ENST00000419974 LRP10Q7Z4F1 713 aa18.15■□□□□ 0.5
SHMT1P1-201ENST00000419974 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
SHMT1P1-201ENST00000419974 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.5
SHMT1P1-201ENST00000419974 RLBP1P12271 317 aa18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 MVPQ14764 893 aaKnown RBP18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 PTF1AQ7RTS3 328 aa18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 PPP4R2Q9NY27 417 aa18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 NUP188Q5SRE5 1749 aa18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
SHMT1P1-201ENST00000419974 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
SHMT1P1-201ENST00000419974 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
SHMT1P1-201ENST00000419974 EIF2S2P20042 333 aaKnown RBP18.13■□□□□ 0.49
SHMT1P1-201ENST00000419974 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
SHMT1P1-201ENST00000419974 DDX19BQ9UMR2 479 aa18.13■□□□□ 0.49
SHMT1P1-201ENST00000419974 C5P01031 1676 aa18.12■□□□□ 0.49
SHMT1P1-201ENST00000419974 PROM2Q8N271 834 aa18.12■□□□□ 0.49
SHMT1P1-201ENST00000419974 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
SHMT1P1-201ENST00000419974 STARD3NLO95772 234 aa18.11■□□□□ 0.49
SHMT1P1-201ENST00000419974 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
SHMT1P1-201ENST00000419974 G2E3Q7L622 706 aa18.11■□□□□ 0.49
SHMT1P1-201ENST00000419974 EXOC6Q8TAG9 804 aa18.11■□□□□ 0.49
SHMT1P1-201ENST00000419974 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
SHMT1P1-201ENST00000419974 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
SHMT1P1-201ENST00000419974 KCNQ2O43526 872 aa18.1■□□□□ 0.49
SHMT1P1-201ENST00000419974 PTCD1O75127 700 aaKnown RBP18.1■□□□□ 0.49
SHMT1P1-201ENST00000419974 HMGB2P26583 209 aaKnown RBP18.1■□□□□ 0.49
SHMT1P1-201ENST00000419974 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
SHMT1P1-201ENST00000419974 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
SHMT1P1-201ENST00000419974 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
SHMT1P1-201ENST00000419974 CCT4P50991 539 aaKnown RBP18.09■□□□□ 0.49
SHMT1P1-201ENST00000419974 ACSBG1Q96GR2 724 aa18.09■□□□□ 0.49
SHMT1P1-201ENST00000419974 ATP10DQ9P241 1426 aa18.09■□□□□ 0.49
SHMT1P1-201ENST00000419974 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.49
SHMT1P1-201ENST00000419974 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.49
SHMT1P1-201ENST00000419974 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.49
SHMT1P1-201ENST00000419974 SIK1P57059 783 aa18.08■□□□□ 0.49
SHMT1P1-201ENST00000419974 TMEM57Q8N5G2 664 aa18.08■□□□□ 0.49
SHMT1P1-201ENST00000419974 COG6Q9Y2V7 657 aa18.08■□□□□ 0.49
SHMT1P1-201ENST00000419974 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 TXNRD1Q16881 649 aa18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 KSR2Q6VAB6 950 aa18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 PHAXQ9H814 394 aaKnown RBP18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 TNNQ9UQP3 1299 aa18.07■□□□□ 0.48
SHMT1P1-201ENST00000419974 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
SHMT1P1-201ENST00000419974 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
SHMT1P1-201ENST00000419974 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
SHMT1P1-201ENST00000419974 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
SHMT1P1-201ENST00000419974 NECTIN2Q92692 538 aa18.06■□□□□ 0.48
SHMT1P1-201ENST00000419974 ZBTB40Q9NUA8 1239 aa18.06■□□□□ 0.48
SHMT1P1-201ENST00000419974 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
SHMT1P1-201ENST00000419974 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
SHMT1P1-201ENST00000419974 TJP1Q07157 1748 aa18.04■□□□□ 0.48
SHMT1P1-201ENST00000419974 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
SHMT1P1-201ENST00000419974 ADCY9O60503 1353 aa18.04■□□□□ 0.48
SHMT1P1-201ENST00000419974 N4BP2Q86UW6 1770 aaPredicted RBP18.03■□□□□ 0.48
SHMT1P1-201ENST00000419974 RGL2O15211 777 aa18.03■□□□□ 0.48
SHMT1P1-201ENST00000419974 IL6STP40189 918 aaPredicted RBP18.03■□□□□ 0.48
SHMT1P1-201ENST00000419974 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
SHMT1P1-201ENST00000419974 PI4KAP2A4QPH2 592 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 A1BGP04217 495 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 ATP6V1AP38606 617 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 PI4KAP1Q8N8J0 262 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
SHMT1P1-201ENST00000419974 BTAF1O14981 1849 aa18.02■□□□□ 0.47
SHMT1P1-201ENST00000419974 ALDH1L1O75891 902 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms