RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
HMGN1P4-201ENST00000419500 NLGN2Q8NFZ4 835 aa16.83■□□□□ 0.28
HMGN1P4-201ENST00000419500 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
HMGN1P4-201ENST00000419500 COL15A1P39059 1388 aa16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 USP42Q9H9J4 1324 aaKnown RBP16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 GYS1P13807 737 aa16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 TEX13AQ9BXU3 409 aaPredicted RBP16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 CD2APQ9Y5K6 639 aa16.82■□□□□ 0.28
HMGN1P4-201ENST00000419500 ZPR1O75312 459 aa16.81■□□□□ 0.28
HMGN1P4-201ENST00000419500 GPR162Q16538 588 aa16.81■□□□□ 0.28
HMGN1P4-201ENST00000419500 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
HMGN1P4-201ENST00000419500 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
HMGN1P4-201ENST00000419500 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
HMGN1P4-201ENST00000419500 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
HMGN1P4-201ENST00000419500 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
HMGN1P4-201ENST00000419500 KCNQ3O43525 872 aa16.78■□□□□ 0.28
HMGN1P4-201ENST00000419500 YY1P25490 414 aa16.78■□□□□ 0.28
HMGN1P4-201ENST00000419500 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
HMGN1P4-201ENST00000419500 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
HMGN1P4-201ENST00000419500 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
HMGN1P4-201ENST00000419500 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.28
HMGN1P4-201ENST00000419500 CCDC146Q8IYE0 955 aa16.77■□□□□ 0.28
HMGN1P4-201ENST00000419500 PNISRQ8TF01 805 aaKnown RBP16.77■□□□□ 0.28
HMGN1P4-201ENST00000419500 SNRPA1P09661 255 aaKnown RBP16.76■□□□□ 0.27
HMGN1P4-201ENST00000419500 RIPK4P57078 832 aa16.76■□□□□ 0.27
HMGN1P4-201ENST00000419500 FKBP8Q14318 412 aa16.76■□□□□ 0.27
HMGN1P4-201ENST00000419500 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
HMGN1P4-201ENST00000419500 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
HMGN1P4-201ENST00000419500 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
HMGN1P4-201ENST00000419500 A0A087WZG4 1122 aa16.75■□□□□ 0.27
HMGN1P4-201ENST00000419500 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
HMGN1P4-201ENST00000419500 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
HMGN1P4-201ENST00000419500 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 RUNDC1Q96C34 613 aa16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 KIF13BQ9NQT8 1826 aa16.74■□□□□ 0.27
HMGN1P4-201ENST00000419500 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
HMGN1P4-201ENST00000419500 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
HMGN1P4-201ENST00000419500 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 A1BGP04217 495 aa16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 YBX3P16989 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 PXDNLA1KZ92 1463 aa16.72■□□□□ 0.27
HMGN1P4-201ENST00000419500 DDR1Q08345 913 aa16.71■□□□□ 0.27
HMGN1P4-201ENST00000419500 TSPYL4Q9UJ04 414 aa16.71■□□□□ 0.27
HMGN1P4-201ENST00000419500 WWC3Q9ULE0 1092 aa16.71■□□□□ 0.27
HMGN1P4-201ENST00000419500 CHD4Q14839 1912 aa16.7■□□□□ 0.26
HMGN1P4-201ENST00000419500 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
HMGN1P4-201ENST00000419500 ANP32CO43423 234 aa16.7■□□□□ 0.26
HMGN1P4-201ENST00000419500 TGFB2P61812 414 aa16.7■□□□□ 0.26
HMGN1P4-201ENST00000419500 TBC1D2BQ9UPU7 963 aa16.7■□□□□ 0.26
HMGN1P4-201ENST00000419500 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
HMGN1P4-201ENST00000419500 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
HMGN1P4-201ENST00000419500 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
HMGN1P4-201ENST00000419500 TM4SF1P30408 202 aa16.69■□□□□ 0.26
HMGN1P4-201ENST00000419500 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
HMGN1P4-201ENST00000419500 NFIXQ14938 502 aa16.69■□□□□ 0.26
HMGN1P4-201ENST00000419500 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
HMGN1P4-201ENST00000419500 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
HMGN1P4-201ENST00000419500 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
HMGN1P4-201ENST00000419500 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
HMGN1P4-201ENST00000419500 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
HMGN1P4-201ENST00000419500 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
HMGN1P4-201ENST00000419500 CARMIL3Q8ND23 1372 aa16.66■□□□□ 0.26
HMGN1P4-201ENST00000419500 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
HMGN1P4-201ENST00000419500 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
HMGN1P4-201ENST00000419500 NRXN2Q9P2S2 1712 aa16.66■□□□□ 0.26
HMGN1P4-201ENST00000419500 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
HMGN1P4-201ENST00000419500 SERPINB2P05120 415 aa16.65■□□□□ 0.26
HMGN1P4-201ENST00000419500 DPEP1P16444 411 aa16.65■□□□□ 0.26
HMGN1P4-201ENST00000419500 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
HMGN1P4-201ENST00000419500 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
HMGN1P4-201ENST00000419500 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 NPHP1O15259 732 aa16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.25
HMGN1P4-201ENST00000419500 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
HMGN1P4-201ENST00000419500 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
HMGN1P4-201ENST00000419500 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
HMGN1P4-201ENST00000419500 APAF1O14727 1248 aa16.62■□□□□ 0.25
HMGN1P4-201ENST00000419500 MYL6BP14649 208 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 CHRNA5P30532 468 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
HMGN1P4-201ENST00000419500 CALD1Q05682 793 aaKnown RBP16.6■□□□□ 0.25
HMGN1P4-201ENST00000419500 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
HMGN1P4-201ENST00000419500 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms