RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NLGN2Q8NFZ4 835 aa26.85■■□□□ 1.89
GTF3A-202ENST00000419181 KDM3BQ7LBC6 1761 aa26.84■■□□□ 1.89
GTF3A-202ENST00000419181 MMP10P09238 476 aa26.84■■□□□ 1.89
GTF3A-202ENST00000419181 CD2APQ9Y5K6 639 aa26.84■■□□□ 1.89
GTF3A-202ENST00000419181 COL15A1P39059 1388 aa26.84■■□□□ 1.89
GTF3A-202ENST00000419181 SRP68Q9UHB9 627 aaKnown RBP26.83■■□□□ 1.89
GTF3A-202ENST00000419181 THUMPD2Q9BTF0 503 aaKnown RBP26.82■■□□□ 1.88
GTF3A-202ENST00000419181 ADAMTS8Q9UP79 889 aa26.82■■□□□ 1.88
GTF3A-202ENST00000419181 UTRNP46939 3433 aa26.81■■□□□ 1.88
GTF3A-202ENST00000419181 TMPOP42166 694 aaKnown RBP26.81■■□□□ 1.88
GTF3A-202ENST00000419181 CCDC146Q8IYE0 955 aa26.81■■□□□ 1.88
GTF3A-202ENST00000419181 CANXP27824 592 aaKnown RBP26.8■■□□□ 1.88
GTF3A-202ENST00000419181 RIPK4P57078 832 aa26.8■■□□□ 1.88
GTF3A-202ENST00000419181 GPR162Q16538 588 aa26.8■■□□□ 1.88
GTF3A-202ENST00000419181 KIF13BQ9NQT8 1826 aa26.79■■□□□ 1.88
GTF3A-202ENST00000419181 PELP1Q8IZL8 1130 aaKnown RBP26.79■■□□□ 1.88
GTF3A-202ENST00000419181 PNISRQ8TF01 805 aaKnown RBP26.79■■□□□ 1.88
GTF3A-202ENST00000419181 RUNDC1Q96C34 613 aa26.79■■□□□ 1.88
GTF3A-202ENST00000419181 MIS18AQ9NYP9 233 aa26.79■■□□□ 1.88
GTF3A-202ENST00000419181 GOLGB1Q14789 3259 aaKnown RBP26.78■■□□□ 1.88
GTF3A-202ENST00000419181 EIF5P55010 431 aaKnown RBP26.78■■□□□ 1.88
GTF3A-202ENST00000419181 FKBP8Q14318 412 aa26.78■■□□□ 1.88
GTF3A-202ENST00000419181 ZPR1O75312 459 aa26.77■■□□□ 1.88
GTF3A-202ENST00000419181 SNRPA1P09661 255 aaKnown RBP26.77■■□□□ 1.88
GTF3A-202ENST00000419181 USPL1Q5W0Q7 1092 aa26.77■■□□□ 1.88
GTF3A-202ENST00000419181 NARFQ9UHQ1 456 aa26.77■■□□□ 1.88
GTF3A-202ENST00000419181 USP16Q9Y5T5 823 aa26.77■■□□□ 1.88
GTF3A-202ENST00000419181 LAMB4A4D0S4 1761 aa26.76■■□□□ 1.88
GTF3A-202ENST00000419181 PRAMEF22A3QJZ6 481 aa26.76■■□□□ 1.87
GTF3A-202ENST00000419181 LMOD3Q0VAK6 560 aa26.76■■□□□ 1.87
GTF3A-202ENST00000419181 A1BGP04217 495 aa26.75■■□□□ 1.87
GTF3A-202ENST00000419181 RRP7AQ9Y3A4 280 aaKnown RBP26.75■■□□□ 1.87
GTF3A-202ENST00000419181 C10orf71Q711Q0 1435 aa26.74■■□□□ 1.87
GTF3A-202ENST00000419181 SCN7AQ01118 1682 aa26.74■■□□□ 1.87
GTF3A-202ENST00000419181 IL6STP40189 918 aaPredicted RBP26.74■■□□□ 1.87
GTF3A-202ENST00000419181 A0A087WZG4 1122 aa26.73■■□□□ 1.87
GTF3A-202ENST00000419181 PARP3Q9Y6F1 533 aa26.73■■□□□ 1.87
GTF3A-202ENST00000419181 KIAA1551Q9HCM1 1747 aa26.73■■□□□ 1.87
GTF3A-202ENST00000419181 DDR1Q08345 913 aa26.72■■□□□ 1.87
GTF3A-202ENST00000419181 BCL2L12Q9HB09 334 aa26.72■■□□□ 1.87
GTF3A-202ENST00000419181 TM4SF1P30408 202 aa26.71■■□□□ 1.87
GTF3A-202ENST00000419181 EIF4A1P60842 406 aaKnown RBP26.71■■□□□ 1.87
GTF3A-202ENST00000419181 NEUROD2Q15784 382 aa26.71■■□□□ 1.87
GTF3A-202ENST00000419181 CCDC184Q52MB2 194 aa26.71■■□□□ 1.87
GTF3A-202ENST00000419181 ZNF330Q9Y3S2 320 aaPredicted RBP26.7■■□□□ 1.86
GTF3A-202ENST00000419181 ANP32CO43423 234 aa26.69■■□□□ 1.86
GTF3A-202ENST00000419181 TRIM35Q9UPQ4 493 aa26.69■■□□□ 1.86
GTF3A-202ENST00000419181 BCORQ6W2J9 1755 aa26.69■■□□□ 1.86
GTF3A-202ENST00000419181 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
GTF3A-202ENST00000419181 POLRMTO00411 1230 aaKnown RBP26.68■■□□□ 1.86
GTF3A-202ENST00000419181 GIGYF1O75420 1035 aaPredicted RBP26.68■■□□□ 1.86
GTF3A-202ENST00000419181 YBX3P16989 372 aaKnown RBP eCLIP26.68■■□□□ 1.862e-8■■□□□ 14.4
GTF3A-202ENST00000419181 BABAM1Q9NWV8 329 aa26.68■■□□□ 1.86
GTF3A-202ENST00000419181 CHD4Q14839 1912 aa26.68■■□□□ 1.86
GTF3A-202ENST00000419181 PIP4K2AP48426 406 aaPredicted RBP26.67■■□□□ 1.86
GTF3A-202ENST00000419181 NFIXQ14938 502 aa26.67■■□□□ 1.86
GTF3A-202ENST00000419181 TSPYL4Q9UJ04 414 aa26.67■■□□□ 1.86
GTF3A-202ENST00000419181 TBC1D2BQ9UPU7 963 aa26.67■■□□□ 1.86
GTF3A-202ENST00000419181 NRXN2Q9P2S2 1712 aa26.67■■□□□ 1.86
GTF3A-202ENST00000419181 AFDNP55196 1824 aaKnown RBP26.67■■□□□ 1.86
GTF3A-202ENST00000419181 N4BP2Q86UW6 1770 aaPredicted RBP26.66■■□□□ 1.86
GTF3A-202ENST00000419181 NBPF26B4DH59 902 aa26.66■■□□□ 1.86
GTF3A-202ENST00000419181 NBPF10Q6P3W6 841 aaKnown RBP26.66■■□□□ 1.86
GTF3A-202ENST00000419181 NBPF15Q8N660 670 aa26.66■■□□□ 1.86
GTF3A-202ENST00000419181 TGFB2P61812 414 aa26.65■■□□□ 1.86
GTF3A-202ENST00000419181 NPM2Q86SE8 214 aaKnown RBP26.65■■□□□ 1.86
GTF3A-202ENST00000419181 GRIN3BO60391 1043 aa26.63■■□□□ 1.85
GTF3A-202ENST00000419181 CAMTA2O94983 1202 aa26.63■■□□□ 1.85
GTF3A-202ENST00000419181 DZIP3Q86Y13 1208 aaKnown RBP26.63■■□□□ 1.85
GTF3A-202ENST00000419181 APAF1O14727 1248 aa26.62■■□□□ 1.85
GTF3A-202ENST00000419181 BRCA1P38398 1863 aaKnown RBP26.62■■□□□ 1.85
GTF3A-202ENST00000419181 CHL1O00533 1208 aa26.6■■□□□ 1.85
GTF3A-202ENST00000419181 TBC1D9BQ66K14 1250 aa26.6■■□□□ 1.85
GTF3A-202ENST00000419181 MRS2Q9HD23 443 aa26.6■■□□□ 1.85
GTF3A-202ENST00000419181 A0A0G2JLW4 131 aa26.59■■□□□ 1.85
GTF3A-202ENST00000419181 SERPINB2P05120 415 aa26.59■■□□□ 1.85
GTF3A-202ENST00000419181 BICDL1Q6ZP65 573 aa26.58■■□□□ 1.85
GTF3A-202ENST00000419181 WWC3Q9ULE0 1092 aa26.58■■□□□ 1.85
GTF3A-202ENST00000419181 DPEP1P16444 411 aa26.57■■□□□ 1.84
GTF3A-202ENST00000419181 ZNF784Q8NCA9 323 aaPredicted RBP26.56■■□□□ 1.84
GTF3A-202ENST00000419181 CARMIL3Q8ND23 1372 aa26.56■■□□□ 1.84
GTF3A-202ENST00000419181 RGL2O15211 777 aa26.55■■□□□ 1.84
GTF3A-202ENST00000419181 KCNA3P22001 575 aa26.55■■□□□ 1.84
GTF3A-202ENST00000419181 CLEC4GQ6UXB4 293 aa26.55■■□□□ 1.84
GTF3A-202ENST00000419181 LAS1LQ9Y4W2 734 aaKnown RBP26.55■■□□□ 1.84
GTF3A-202ENST00000419181 ERBB4Q15303 1308 aa26.55■■□□□ 1.84
GTF3A-202ENST00000419181 CFAP44Q96MT7 982 aa26.54■■□□□ 1.84
GTF3A-202ENST00000419181 ZNF652Q9Y2D9 606 aa26.53■■□□□ 1.84
GTF3A-202ENST00000419181 SETDB2Q96T68 719 aa26.52■■□□□ 1.84
GTF3A-202ENST00000419181 ANKRD31Q8N7Z5 1873 aa26.51■■□□□ 1.83
GTF3A-202ENST00000419181 DLEC1Q9Y238 1755 aa26.51■■□□□ 1.83
GTF3A-202ENST00000419181 ZNF853P0CG23 659 aa26.51■■□□□ 1.83
GTF3A-202ENST00000419181 ARFGEF1Q9Y6D6 1849 aa26.51■■□□□ 1.83
GTF3A-202ENST00000419181 MYL6BP14649 208 aa26.5■■□□□ 1.83
GTF3A-202ENST00000419181 CHRNA5P30532 468 aa26.5■■□□□ 1.83
GTF3A-202ENST00000419181 CALD1Q05682 793 aaKnown RBP26.5■■□□□ 1.83
GTF3A-202ENST00000419181 PDIA6Q15084 440 aa26.5■■□□□ 1.83
GTF3A-202ENST00000419181 KRT24Q2M2I5 525 aa26.5■■□□□ 1.83
GTF3A-202ENST00000419181 EIF2S2P20042 333 aaKnown RBP26.49■■□□□ 1.83
GTF3A-202ENST00000419181 PRR5LQ6MZQ0 368 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms