RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 SMC4Q9NTJ3 1288 aa13.71□□□□□ -0.21
NPHP1-205ENST00000418527 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.21
NPHP1-205ENST00000418527 VIRMAQ69YN4 1812 aaKnown RBP13.7□□□□□ -0.22
NPHP1-205ENST00000418527 CYP27B1O15528 508 aa13.7□□□□□ -0.22
NPHP1-205ENST00000418527 CABP4P57796 275 aa13.7□□□□□ -0.22
NPHP1-205ENST00000418527 IRX6P78412 446 aaPredicted RBP13.7□□□□□ -0.22
NPHP1-205ENST00000418527 VPS72Q15906 364 aa13.7□□□□□ -0.22
NPHP1-205ENST00000418527 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
NPHP1-205ENST00000418527 LRP6O75581 1613 aa13.7□□□□□ -0.22
NPHP1-205ENST00000418527 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
NPHP1-205ENST00000418527 ALDH1L2Q3SY69 923 aa13.69□□□□□ -0.22
NPHP1-205ENST00000418527 ERICH6BQ5W0A0 696 aa13.69□□□□□ -0.22
NPHP1-205ENST00000418527 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
NPHP1-205ENST00000418527 AFF2P51816 1311 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
NPHP1-205ENST00000418527 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 A0A0G2JS52 829 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 RIOK3O14730 519 aaKnown RBP13.68□□□□□ -0.22
NPHP1-205ENST00000418527 BCAR3O75815 825 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 MS4A1P11836 297 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 MYT1Q01538 1121 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 DDB1Q16531 1140 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 FRAT1Q92837 279 aaPredicted RBP13.68□□□□□ -0.22
NPHP1-205ENST00000418527 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
NPHP1-205ENST00000418527 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
NPHP1-205ENST00000418527 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
NPHP1-205ENST00000418527 IPO8O15397 1037 aaKnown RBP13.67□□□□□ -0.22
NPHP1-205ENST00000418527 ST18O60284 1047 aa13.67□□□□□ -0.22
NPHP1-205ENST00000418527 VAMP4O75379 141 aa13.67□□□□□ -0.22
NPHP1-205ENST00000418527 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
NPHP1-205ENST00000418527 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
NPHP1-205ENST00000418527 BCL2L13Q9BXK5 485 aa13.67□□□□□ -0.22
NPHP1-205ENST00000418527 WNK3Q9BYP7 1800 aa13.67□□□□□ -0.22
NPHP1-205ENST00000418527 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
NPHP1-205ENST00000418527 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
NPHP1-205ENST00000418527 PLIN1O60240 522 aa13.66□□□□□ -0.22
NPHP1-205ENST00000418527 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
NPHP1-205ENST00000418527 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
NPHP1-205ENST00000418527 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.66□□□□□ -0.22
NPHP1-205ENST00000418527 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
NPHP1-205ENST00000418527 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
NPHP1-205ENST00000418527 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 STK31Q9BXU1 1019 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
NPHP1-205ENST00000418527 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
NPHP1-205ENST00000418527 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
NPHP1-205ENST00000418527 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
NPHP1-205ENST00000418527 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
NPHP1-205ENST00000418527 HOXB7P09629 217 aa13.63□□□□□ -0.23
NPHP1-205ENST00000418527 PDAP1Q13442 181 aaKnown RBP13.63□□□□□ -0.23
NPHP1-205ENST00000418527 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
NPHP1-205ENST00000418527 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
NPHP1-205ENST00000418527 FTSJ3Q8IY81 847 aaKnown RBP13.63□□□□□ -0.23
NPHP1-205ENST00000418527 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
NPHP1-205ENST00000418527 KDM3BQ7LBC6 1761 aa13.63□□□□□ -0.23
NPHP1-205ENST00000418527 MRC1P22897 1456 aa13.62□□□□□ -0.23
NPHP1-205ENST00000418527 SHANK3Q9BYB0 1731 aa13.62□□□□□ -0.23
NPHP1-205ENST00000418527 RGL2O15211 777 aa13.62□□□□□ -0.23
NPHP1-205ENST00000418527 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
NPHP1-205ENST00000418527 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
NPHP1-205ENST00000418527 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
NPHP1-205ENST00000418527 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
NPHP1-205ENST00000418527 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
NPHP1-205ENST00000418527 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
NPHP1-205ENST00000418527 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
NPHP1-205ENST00000418527 NOB1Q9ULX3 412 aaKnown RBP13.61□□□□□ -0.23
NPHP1-205ENST00000418527 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
NPHP1-205ENST00000418527 KCNQ3O43525 872 aa13.6□□□□□ -0.23
NPHP1-205ENST00000418527 EIF2S2P20042 333 aaKnown RBP13.6□□□□□ -0.23
NPHP1-205ENST00000418527 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
NPHP1-205ENST00000418527 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
NPHP1-205ENST00000418527 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
NPHP1-205ENST00000418527 API5Q9BZZ5 524 aaKnown RBP13.6□□□□□ -0.23
NPHP1-205ENST00000418527 QTRT2Q9H974 415 aaKnown RBP13.6□□□□□ -0.23
NPHP1-205ENST00000418527 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
NPHP1-205ENST00000418527 ATRNO75882 1429 aa13.59□□□□□ -0.23
NPHP1-205ENST00000418527 PSEN1P49768 467 aa13.59□□□□□ -0.23
NPHP1-205ENST00000418527 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
NPHP1-205ENST00000418527 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
NPHP1-205ENST00000418527 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
NPHP1-205ENST00000418527 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
NPHP1-205ENST00000418527 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
NPHP1-205ENST00000418527 NECTIN2Q92692 538 aa13.58□□□□□ -0.24
NPHP1-205ENST00000418527 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
NPHP1-205ENST00000418527 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
NPHP1-205ENST00000418527 MARCH10Q8NA82 808 aaPredicted RBP13.57□□□□□ -0.24
NPHP1-205ENST00000418527 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
NPHP1-205ENST00000418527 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
NPHP1-205ENST00000418527 CACNA1FO60840 1977 aa13.57□□□□□ -0.24
NPHP1-205ENST00000418527 PTPRCP08575 1304 aa13.57□□□□□ -0.24
NPHP1-205ENST00000418527 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms