RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 PIM2Q9P1W9 311 aa17.29■□□□□ 0.36
PDLIM4-203ENST00000418373 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-203ENST00000418373 COL15A1P39059 1388 aa17.28■□□□□ 0.36
PDLIM4-203ENST00000418373 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.36
PDLIM4-203ENST00000418373 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
PDLIM4-203ENST00000418373 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
PDLIM4-203ENST00000418373 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
PDLIM4-203ENST00000418373 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
PDLIM4-203ENST00000418373 ZPR1O75312 459 aa17.26■□□□□ 0.35
PDLIM4-203ENST00000418373 CHRNA5P30532 468 aa17.26■□□□□ 0.35
PDLIM4-203ENST00000418373 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-203ENST00000418373 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
PDLIM4-203ENST00000418373 TOMM70O94826 608 aa17.25■□□□□ 0.35
PDLIM4-203ENST00000418373 NFIXQ14938 502 aa17.25■□□□□ 0.35
PDLIM4-203ENST00000418373 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
PDLIM4-203ENST00000418373 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
PDLIM4-203ENST00000418373 TNRC6CQ9HCJ0 1690 aaKnown RBP17.25■□□□□ 0.35
PDLIM4-203ENST00000418373 ANKRD31Q8N7Z5 1873 aa17.24■□□□□ 0.35
PDLIM4-203ENST00000418373 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
PDLIM4-203ENST00000418373 WDR90Q96KV7 1748 aa17.22■□□□□ 0.35
PDLIM4-203ENST00000418373 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
PDLIM4-203ENST00000418373 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
PDLIM4-203ENST00000418373 EIF5P55010 431 aaKnown RBP17.21■□□□□ 0.35
PDLIM4-203ENST00000418373 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-203ENST00000418373 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
PDLIM4-203ENST00000418373 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
PDLIM4-203ENST00000418373 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
PDLIM4-203ENST00000418373 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
PDLIM4-203ENST00000418373 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
PDLIM4-203ENST00000418373 PCNTO95613 3336 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 GNAT3A8MTJ3 354 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 SERPINB2P05120 415 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 CANXP27824 592 aaKnown RBP17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 APLP1P51693 650 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
PDLIM4-203ENST00000418373 U2SURPO15042 1029 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-203ENST00000418373 STARD3NLO95772 234 aa17.18■□□□□ 0.34
PDLIM4-203ENST00000418373 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
PDLIM4-203ENST00000418373 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
PDLIM4-203ENST00000418373 TEFQ10587 303 aa17.17■□□□□ 0.34
PDLIM4-203ENST00000418373 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
PDLIM4-203ENST00000418373 DNAJC5GQ8N7S2 189 aa17.17■□□□□ 0.34
PDLIM4-203ENST00000418373 DICER1Q9UPY3 1922 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-203ENST00000418373 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
PDLIM4-203ENST00000418373 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
PDLIM4-203ENST00000418373 PRELPP51888 382 aa17.16■□□□□ 0.34
PDLIM4-203ENST00000418373 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
PDLIM4-203ENST00000418373 A0A087WZG4 1122 aa17.15■□□□□ 0.34
PDLIM4-203ENST00000418373 RASSF7Q02833 373 aa17.15■□□□□ 0.34
PDLIM4-203ENST00000418373 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
PDLIM4-203ENST00000418373 TEX13AQ9BXU3 409 aaPredicted RBP17.15■□□□□ 0.34
PDLIM4-203ENST00000418373 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
PDLIM4-203ENST00000418373 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
PDLIM4-203ENST00000418373 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-203ENST00000418373 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
PDLIM4-203ENST00000418373 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
PDLIM4-203ENST00000418373 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
PDLIM4-203ENST00000418373 FSTL1Q12841 308 aa17.13■□□□□ 0.33
PDLIM4-203ENST00000418373 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-203ENST00000418373 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
PDLIM4-203ENST00000418373 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
PDLIM4-203ENST00000418373 H0YIN7 160 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 NFKBIEO00221 500 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 KCNQ3O43525 872 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 LMNB1P20700 586 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 BICDL1Q6ZP65 573 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 RRAGCQ9HB90 399 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
PDLIM4-203ENST00000418373 A1BGP04217 495 aa17.11■□□□□ 0.33
PDLIM4-203ENST00000418373 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
PDLIM4-203ENST00000418373 C16orf71Q8IYS4 520 aaPredicted RBP17.11■□□□□ 0.33
PDLIM4-203ENST00000418373 SLX4Q8IY92 1834 aa17.11■□□□□ 0.33
PDLIM4-203ENST00000418373 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
PDLIM4-203ENST00000418373 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
PDLIM4-203ENST00000418373 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
PDLIM4-203ENST00000418373 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
PDLIM4-203ENST00000418373 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
PDLIM4-203ENST00000418373 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
PDLIM4-203ENST00000418373 LAMB4A4D0S4 1761 aa17.09■□□□□ 0.33
PDLIM4-203ENST00000418373 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
PDLIM4-203ENST00000418373 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
PDLIM4-203ENST00000418373 PDE6BP35913 854 aa17.08■□□□□ 0.32
PDLIM4-203ENST00000418373 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.32
PDLIM4-203ENST00000418373 HTRA3P83110 453 aa17.07■□□□□ 0.32
PDLIM4-203ENST00000418373 CCDC24Q8N4L8 307 aa17.07■□□□□ 0.32
PDLIM4-203ENST00000418373 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
PDLIM4-203ENST00000418373 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
PDLIM4-203ENST00000418373 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
PDLIM4-203ENST00000418373 KLRG1Q96E93 195 aa17.06■□□□□ 0.32
PDLIM4-203ENST00000418373 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
PDLIM4-203ENST00000418373 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
PDLIM4-203ENST00000418373 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
PDLIM4-203ENST00000418373 U2AF1L5P0DN76 240 aaPredicted RBP17.05■□□□□ 0.32
PDLIM4-203ENST00000418373 U2AF1Q01081 240 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDLIM4-203ENST00000418373 MCM10Q7L590 875 aa17.05■□□□□ 0.32
PDLIM4-203ENST00000418373 DZIP3Q86Y13 1208 aaKnown RBP17.05■□□□□ 0.32
PDLIM4-203ENST00000418373 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms