RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 INO80Q9ULG1 1556 aaPredicted RBP17.09■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 CHRNA2Q15822 529 aa17.09■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 TOMM22Q9NS69 142 aa17.09■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 TET3O43151 1660 aa17.09■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 PTPRCP08575 1304 aa17.08■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 ZNF853P0CG23 659 aa17.08■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 KCNA6P17658 529 aa17.08■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.33
GTF2IRD2B-202ENST00000418185 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ABCA9Q8IUA7 1624 aa17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SNRKQ9NRH2 765 aa17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 CCDC39Q9UFE4 941 aa17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 STX6O43752 255 aa17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 LRSAM1Q6UWE0 723 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 NEURL4Q96JN8 1562 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 DDX46Q7L014 1031 aaKnown RBP17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 MYOM1P52179 1685 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 CHGBP05060 677 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ATP2B1P20020 1258 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SYT1P21579 422 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 CBX1P83916 185 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 MYD88Q99836 296 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SF3A1Q15459 793 aaKnown RBP17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 MROH1Q8NDA8 1641 aa17.06■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 PTH1RQ03431 593 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 MYOM2P54296 1465 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 LARGE1O95461 756 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 PKNOX2Q96KN3 472 aa17.05■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 BECN2A8MW95 431 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 APPP05067 770 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 LIMCH1Q9UPQ0 1083 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 HAND2P61296 217 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 C16orf45Q96MC5 204 aaPredicted RBP17.03■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 ATP6V1DQ9Y5K8 247 aa17.02■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.02■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 V9GYY5 206 aaPredicted RBP17.02■□□□□ 0.32
GTF2IRD2B-202ENST00000418185 KIF1BO60333 1816 aa17.02■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 HOXC9P31274 260 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 MCM2P49736 904 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 RBM8AQ9Y5S9 174 aaKnown RBP17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 GOLGA6L19H0YKK7 550 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 RRP9O43818 475 aaKnown RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 ORAI2Q96SN7 254 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 PHF8Q9UPP1 1060 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 ZMYM3Q14202 1370 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 BIN1O00499 593 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 ZSCAN22P10073 491 aaPredicted RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 SASS6Q6UVJ0 657 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 ISY1Q9ULR0 285 aaKnown RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 IQSEC2Q5JU85 1478 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 FAM135BQ49AJ0 1406 aa17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
GTF2IRD2B-202ENST00000418185 SEC62Q99442 399 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms