RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 ZNF831Q5JPB2 1677 aa17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 RPS6KA4O75676 772 aa17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 CABP4P57796 275 aa17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 PARP3Q9Y6F1 533 aa17.14■□□□□ 0.33
HLA-DMB-258ENST00000418107 ZNF521Q96K83 1311 aa17.12■□□□□ 0.33
HLA-DMB-258ENST00000418107 E9PSI1 815 aa17.12■□□□□ 0.33
HLA-DMB-258ENST00000418107 TOMM70O94826 608 aa17.12■□□□□ 0.33
HLA-DMB-258ENST00000418107 RIPK4P57078 832 aa17.12■□□□□ 0.33
HLA-DMB-258ENST00000418107 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
HLA-DMB-258ENST00000418107 NMRK2Q9NPI5 230 aa17.12■□□□□ 0.33
HLA-DMB-258ENST00000418107 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
HLA-DMB-258ENST00000418107 APLP1P51693 650 aa17.11■□□□□ 0.33
HLA-DMB-258ENST00000418107 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
HLA-DMB-258ENST00000418107 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
HLA-DMB-258ENST00000418107 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 KCNA3P22001 575 aa17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 SLFN5Q08AF3 891 aa17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 FKBP8Q14318 412 aa17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
HLA-DMB-258ENST00000418107 CRKLP46109 303 aaKnown RBP17.09■□□□□ 0.33
HLA-DMB-258ENST00000418107 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
HLA-DMB-258ENST00000418107 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
HLA-DMB-258ENST00000418107 C1orf141Q5JVX7 400 aa17.08■□□□□ 0.32
HLA-DMB-258ENST00000418107 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.32
HLA-DMB-258ENST00000418107 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
HLA-DMB-258ENST00000418107 DDR1Q08345 913 aa17.07■□□□□ 0.32
HLA-DMB-258ENST00000418107 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
HLA-DMB-258ENST00000418107 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
HLA-DMB-258ENST00000418107 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
HLA-DMB-258ENST00000418107 DLG5Q8TDM6 1919 aa17.07■□□□□ 0.32
HLA-DMB-258ENST00000418107 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
HLA-DMB-258ENST00000418107 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
HLA-DMB-258ENST00000418107 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
HLA-DMB-258ENST00000418107 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
HLA-DMB-258ENST00000418107 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
HLA-DMB-258ENST00000418107 TJP1Q07157 1748 aa17.05■□□□□ 0.32
HLA-DMB-258ENST00000418107 ARFGEF1Q9Y6D6 1849 aa17.04■□□□□ 0.32
HLA-DMB-258ENST00000418107 CHRNA5P30532 468 aa17.04■□□□□ 0.32
HLA-DMB-258ENST00000418107 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMB-258ENST00000418107 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
HLA-DMB-258ENST00000418107 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
HLA-DMB-258ENST00000418107 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
HLA-DMB-258ENST00000418107 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
HLA-DMB-258ENST00000418107 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
HLA-DMB-258ENST00000418107 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
HLA-DMB-258ENST00000418107 KCPQ6ZWJ8 1503 aa17.02■□□□□ 0.32
HLA-DMB-258ENST00000418107 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
HLA-DMB-258ENST00000418107 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
HLA-DMB-258ENST00000418107 VIRMAQ69YN4 1812 aaKnown RBP17.02■□□□□ 0.31
HLA-DMB-258ENST00000418107 POLRMTO00411 1230 aaKnown RBP17.02■□□□□ 0.31
HLA-DMB-258ENST00000418107 HTRA3P83110 453 aa17.02■□□□□ 0.31
HLA-DMB-258ENST00000418107 IL16Q14005 1332 aa17.01■□□□□ 0.31
HLA-DMB-258ENST00000418107 TM4SF1P30408 202 aa17.01■□□□□ 0.31
HLA-DMB-258ENST00000418107 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
HLA-DMB-258ENST00000418107 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
HLA-DMB-258ENST00000418107 WDR90Q96KV7 1748 aa17■□□□□ 0.31
HLA-DMB-258ENST00000418107 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
HLA-DMB-258ENST00000418107 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
HLA-DMB-258ENST00000418107 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
HLA-DMB-258ENST00000418107 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
HLA-DMB-258ENST00000418107 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
HLA-DMB-258ENST00000418107 SOS1Q07889 1333 aaPredicted RBP16.99■□□□□ 0.31
HLA-DMB-258ENST00000418107 ZPR1O75312 459 aa16.99■□□□□ 0.31
HLA-DMB-258ENST00000418107 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
HLA-DMB-258ENST00000418107 FSTL1Q12841 308 aa16.98■□□□□ 0.31
HLA-DMB-258ENST00000418107 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
HLA-DMB-258ENST00000418107 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
HLA-DMB-258ENST00000418107 SLC52A2Q9HAB3 445 aa16.98■□□□□ 0.31
HLA-DMB-258ENST00000418107 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
HLA-DMB-258ENST00000418107 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
HLA-DMB-258ENST00000418107 RASSF7Q02833 373 aa16.97■□□□□ 0.31
HLA-DMB-258ENST00000418107 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
HLA-DMB-258ENST00000418107 KLRG1Q96E93 195 aa16.97■□□□□ 0.31
HLA-DMB-258ENST00000418107 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
HLA-DMB-258ENST00000418107 GNAI1P63096 354 aa16.96■□□□□ 0.31
HLA-DMB-258ENST00000418107 NFIXQ14938 502 aa16.96■□□□□ 0.31
HLA-DMB-258ENST00000418107 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
HLA-DMB-258ENST00000418107 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
HLA-DMB-258ENST00000418107 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
HLA-DMB-258ENST00000418107 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
HLA-DMB-258ENST00000418107 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
HLA-DMB-258ENST00000418107 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
HLA-DMB-258ENST00000418107 ZBTB1Q9Y2K1 713 aa16.95■□□□□ 0.3
HLA-DMB-258ENST00000418107 COL15A1P39059 1388 aa16.95■□□□□ 0.3
HLA-DMB-258ENST00000418107 MRC1P22897 1456 aa16.94■□□□□ 0.3
HLA-DMB-258ENST00000418107 RNF123Q5XPI4 1314 aa16.94■□□□□ 0.3
HLA-DMB-258ENST00000418107 FANCIQ9NVI1 1328 aa16.94■□□□□ 0.3
HLA-DMB-258ENST00000418107 SBF1O95248 1867 aa16.94■□□□□ 0.3
HLA-DMB-258ENST00000418107 DCTN1Q14203 1278 aa16.94■□□□□ 0.3
HLA-DMB-258ENST00000418107 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms