RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 SERTAD1Q9UHV2 236 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
NIFKP3-201ENST00000417799 DISP1Q96F81 1524 aa9.12□□□□□ -0.95
NIFKP3-201ENST00000417799 TIMP2P16035 220 aa9.12□□□□□ -0.95
NIFKP3-201ENST00000417799 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
NIFKP3-201ENST00000417799 IVNS1ABPQ9Y6Y0 642 aa9.12□□□□□ -0.95
NIFKP3-201ENST00000417799 SHROOM2Q13796 1616 aa9.12□□□□□ -0.95
NIFKP3-201ENST00000417799 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
NIFKP3-201ENST00000417799 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 OCLNQ16625 522 aa9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 HPS1Q92902 700 aa9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 SLC4A9Q96Q91 983 aa9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 CXXC1Q9P0U4 656 aaPredicted RBP9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 FHOD3Q2V2M9 1422 aa9.11□□□□□ -0.95
NIFKP3-201ENST00000417799 GFRA3O60609 400 aa9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 WEE1P30291 646 aa9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 KDF1Q8NAX2 398 aaPredicted RBP9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 XAGE2Q96GT9 111 aa9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 GNEQ9Y223 722 aaKnown RBP9.1□□□□□ -0.95
NIFKP3-201ENST00000417799 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 A0A1W2PRU2 124 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 IL2RAP01589 272 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 PTGIRP43119 386 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 TXNDC2Q86VQ3 553 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 AGBL1Q96MI9 1066 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
NIFKP3-201ENST00000417799 SMTNP53814 917 aa9.08□□□□□ -0.96
NIFKP3-201ENST00000417799 EPHA4P54764 986 aa9.08□□□□□ -0.96
NIFKP3-201ENST00000417799 RELBQ01201 579 aa9.08□□□□□ -0.96
NIFKP3-201ENST00000417799 ESYT1Q9BSJ8 1104 aa9.08□□□□□ -0.96
NIFKP3-201ENST00000417799 FMN1Q68DA7 1419 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 VPS8Q8N3P4 1428 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 A6NJY4 79 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 IGFBP4P22692 258 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 CLN3Q13286 438 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 TAS1R3Q7RTX0 852 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 SCG3Q8WXD2 468 aaKnown RBP9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
NIFKP3-201ENST00000417799 TTBK1Q5TCY1 1321 aaPredicted RBP9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 PTPRGP23470 1445 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 MEN1O00255 615 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 SCNN1AP37088 669 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 MTFR1Q15390 333 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 TLR1Q15399 786 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 MEIOBQ8N635 442 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 TSPAN10Q9H1Z9 355 aaPredicted RBP9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 ZNF395Q9H8N7 513 aaPredicted RBP9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 HRH3Q9Y5N1 445 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 ATAD2Q6PL18 1390 aa9.06□□□□□ -0.96
NIFKP3-201ENST00000417799 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
NIFKP3-201ENST00000417799 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
NIFKP3-201ENST00000417799 GAS2L2Q8NHY3 880 aa9.05□□□□□ -0.96
NIFKP3-201ENST00000417799 SCHIP1Q9P0W5 487 aaPredicted RBP9.05□□□□□ -0.96
NIFKP3-201ENST00000417799 NRG2O14511 850 aaPredicted RBP9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 FOXO3O43524 673 aa9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 FOXK2Q01167 660 aa9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 CENPCQ03188 943 aa9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 TMCO4Q5TGY1 634 aa9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 SLC9A9Q8IVB4 645 aa9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 MKNK1Q9BUB5 465 aa9.04□□□□□ -0.96
NIFKP3-201ENST00000417799 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 CDK2AP1O14519 115 aa9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 C21orf2O43822 256 aa9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 TBCELQ5QJ74 424 aa9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 CCDC9Q9Y3X0 531 aaKnown RBP9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 CASKIN1Q8WXD9 1431 aa9.03□□□□□ -0.96
NIFKP3-201ENST00000417799 ARHGEF11O15085 1522 aa9.02□□□□□ -0.97
NIFKP3-201ENST00000417799 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
NIFKP3-201ENST00000417799 SERPINB4P48594 390 aa9.02□□□□□ -0.97
NIFKP3-201ENST00000417799 FHDC1Q9C0D6 1143 aaPredicted RBP9.02□□□□□ -0.97
NIFKP3-201ENST00000417799 UPP2O95045 317 aa9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 NBPF15Q8N660 670 aa9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 COL26A1Q96A83 441 aa9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 VTI1AQ96AJ9 217 aa9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 IQSEC3Q9UPP2 1182 aaPredicted RBP9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 USP3Q9Y6I4 520 aa9.01□□□□□ -0.97
NIFKP3-201ENST00000417799 UACAQ9BZF9 1416 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 PSMA6P60900 246 aaKnown RBP9□□□□□ -0.97
NIFKP3-201ENST00000417799 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 SND1Q7KZF4 910 aaKnown RBP eCLIP9□□□□□ -0.97
NIFKP3-201ENST00000417799 STAG2Q8N3U4 1231 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 ZSCAN10Q96SZ4 725 aaPredicted RBP9□□□□□ -0.97
NIFKP3-201ENST00000417799 SEPT3Q9UH03 358 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 CHMP3Q9Y3E7 222 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 PLB1Q6P1J6 1458 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
NIFKP3-201ENST00000417799 SPINT1O43278 529 aa8.99□□□□□ -0.97
NIFKP3-201ENST00000417799 ABL1P00519 1130 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms