RNA–Protein interactions for RNA: ENST00000417231.5

UBE2F-207, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 984 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-207ENST00000417231 TM4SF1P30408 202 aa26.4■■□□□ 1.82
UBE2F-207ENST00000417231 NARFQ9UHQ1 456 aa26.4■■□□□ 1.82
UBE2F-207ENST00000417231 HEG1Q9ULI3 1381 aa26.4■■□□□ 1.82
UBE2F-207ENST00000417231 FMNL2Q96PY5 1086 aa26.39■■□□□ 1.82
UBE2F-207ENST00000417231 PXDNLA1KZ92 1463 aa26.38■■□□□ 1.81
UBE2F-207ENST00000417231 COL15A1P39059 1388 aa26.38■■□□□ 1.81
UBE2F-207ENST00000417231 BCL2L12Q9HB09 334 aa26.38■■□□□ 1.81
UBE2F-207ENST00000417231 BCS1LQ9Y276 419 aa26.38■■□□□ 1.81
UBE2F-207ENST00000417231 ZNF330Q9Y3S2 320 aaPredicted RBP26.38■■□□□ 1.81
UBE2F-207ENST00000417231 C10orf71Q711Q0 1435 aa26.38■■□□□ 1.81
UBE2F-207ENST00000417231 C4AP0C0L4 1744 aa26.37■■□□□ 1.81
UBE2F-207ENST00000417231 POLRMTO00411 1230 aaKnown RBP26.37■■□□□ 1.81
UBE2F-207ENST00000417231 A1BGP04217 495 aa26.37■■□□□ 1.81
UBE2F-207ENST00000417231 TEX13AQ9BXU3 409 aaPredicted RBP26.37■■□□□ 1.81
UBE2F-207ENST00000417231 CHD4Q14839 1912 aa26.36■■□□□ 1.81
UBE2F-207ENST00000417231 EIF5P55010 431 aaKnown RBP26.36■■□□□ 1.81
UBE2F-207ENST00000417231 NFIXQ14938 502 aa26.36■■□□□ 1.81
UBE2F-207ENST00000417231 VIRMAQ69YN4 1812 aaKnown RBP26.35■■□□□ 1.81
UBE2F-207ENST00000417231 PRAMEF22A3QJZ6 481 aa26.35■■□□□ 1.81
UBE2F-207ENST00000417231 KCNA3P22001 575 aa26.34■■□□□ 1.81
UBE2F-207ENST00000417231 MIS18AQ9NYP9 233 aa26.34■■□□□ 1.81
UBE2F-207ENST00000417231 USP16Q9Y5T5 823 aa26.34■■□□□ 1.81
UBE2F-207ENST00000417231 HTATSF1O43719 755 aaKnown RBP26.33■■□□□ 1.81
UBE2F-207ENST00000417231 NEFMP07197 916 aa26.33■■□□□ 1.81
UBE2F-207ENST00000417231 BICDL1Q6ZP65 573 aa26.33■■□□□ 1.81
UBE2F-207ENST00000417231 PLEKHF1Q96S99 279 aa26.33■■□□□ 1.81
UBE2F-207ENST00000417231 TBC1D2BQ9UPU7 963 aa26.33■■□□□ 1.81
UBE2F-207ENST00000417231 CHRNA5P30532 468 aa26.32■■□□□ 1.8
UBE2F-207ENST00000417231 PIP4K2AP48426 406 aaPredicted RBP26.32■■□□□ 1.8
UBE2F-207ENST00000417231 UBR2Q8IWV8 1755 aa26.31■■□□□ 1.8
UBE2F-207ENST00000417231 RALBP1Q15311 655 aa26.31■■□□□ 1.8
UBE2F-207ENST00000417231 A0A087WZG4 1122 aa26.3■■□□□ 1.8
UBE2F-207ENST00000417231 TAF7Q15545 349 aaPredicted RBP26.3■■□□□ 1.8
UBE2F-207ENST00000417231 SERPINB2P05120 415 aa26.29■■□□□ 1.8
UBE2F-207ENST00000417231 ARHGAP27Q6ZUM4 889 aa26.29■■□□□ 1.8
UBE2F-207ENST00000417231 IL6STP40189 918 aaPredicted RBP26.28■■□□□ 1.8
UBE2F-207ENST00000417231 ZNF526Q8TF50 670 aaPredicted RBP26.28■■□□□ 1.8
UBE2F-207ENST00000417231 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
UBE2F-207ENST00000417231 PIM2Q9P1W9 311 aa26.28■■□□□ 1.8
UBE2F-207ENST00000417231 SIPA1L3O60292 1781 aaPredicted RBP26.28■■□□□ 1.8
UBE2F-207ENST00000417231 SNRPA1P09661 255 aaKnown RBP26.27■■□□□ 1.8
UBE2F-207ENST00000417231 NFE2L2Q16236 605 aa26.27■■□□□ 1.8
UBE2F-207ENST00000417231 TBC1D9BQ66K14 1250 aa26.27■■□□□ 1.8
UBE2F-207ENST00000417231 ATP10DQ9P241 1426 aa26.27■■□□□ 1.8
UBE2F-207ENST00000417231 N4BP2Q86UW6 1770 aaPredicted RBP26.27■■□□□ 1.8
UBE2F-207ENST00000417231 NPM2Q86SE8 214 aaKnown RBP26.26■■□□□ 1.79
UBE2F-207ENST00000417231 KIF13BQ9NQT8 1826 aa26.25■■□□□ 1.79
UBE2F-207ENST00000417231 KIAA1551Q9HCM1 1747 aa26.25■■□□□ 1.79
UBE2F-207ENST00000417231 GIGYF1O75420 1035 aaPredicted RBP26.25■■□□□ 1.79
UBE2F-207ENST00000417231 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
UBE2F-207ENST00000417231 C1QTNF8P60827 252 aa26.24■■□□□ 1.79
UBE2F-207ENST00000417231 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
UBE2F-207ENST00000417231 PNNQ9H307 717 aaKnown RBP26.24■■□□□ 1.79
UBE2F-207ENST00000417231 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
UBE2F-207ENST00000417231 CAMTA2O94983 1202 aa26.22■■□□□ 1.79
UBE2F-207ENST00000417231 DZIP3Q86Y13 1208 aaKnown RBP26.22■■□□□ 1.79
UBE2F-207ENST00000417231 GPBP1L1Q9HC44 474 aaPredicted RBP26.21■■□□□ 1.79
UBE2F-207ENST00000417231 NBPF26B4DH59 902 aa26.2■■□□□ 1.78
UBE2F-207ENST00000417231 NBPF10Q6P3W6 841 aaKnown RBP26.2■■□□□ 1.78
UBE2F-207ENST00000417231 NBPF15Q8N660 670 aa26.2■■□□□ 1.78
UBE2F-207ENST00000417231 ADCY9O60503 1353 aa26.2■■□□□ 1.78
UBE2F-207ENST00000417231 MYBBP1AQ9BQG0 1328 aaKnown RBP26.19■■□□□ 1.78
UBE2F-207ENST00000417231 C2CD5Q86YS7 1000 aa26.18■■□□□ 1.78
UBE2F-207ENST00000417231 CARMIL3Q8ND23 1372 aa26.18■■□□□ 1.78
UBE2F-207ENST00000417231 RIPK4P57078 832 aa26.17■■□□□ 1.78
UBE2F-207ENST00000417231 PNISRQ8TF01 805 aaKnown RBP26.17■■□□□ 1.78
UBE2F-207ENST00000417231 SETDB2Q96T68 719 aa26.17■■□□□ 1.78
UBE2F-207ENST00000417231 CCDC146Q8IYE0 955 aa26.16■■□□□ 1.78
UBE2F-207ENST00000417231 EIF4A1P60842 406 aaKnown RBP26.15■■□□□ 1.78
UBE2F-207ENST00000417231 PRR5LQ6MZQ0 368 aa26.15■■□□□ 1.78
UBE2F-207ENST00000417231 NGEFQ8N5V2 710 aa26.15■■□□□ 1.78
UBE2F-207ENST00000417231 RRP7AQ9Y3A4 280 aaKnown RBP26.15■■□□□ 1.78
UBE2F-207ENST00000417231 H0YIN7 160 aa26.14■■□□□ 1.78
UBE2F-207ENST00000417231 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
UBE2F-207ENST00000417231 NEUROD2Q15784 382 aa26.13■■□□□ 1.77
UBE2F-207ENST00000417231 C9orf131Q5VYM1 1079 aa26.13■■□□□ 1.77
UBE2F-207ENST00000417231 NPHP1O15259 732 aa26.12■■□□□ 1.77
UBE2F-207ENST00000417231 SENP3-EIF4A1A0A087X0R7 540 aa26.11■■□□□ 1.77
UBE2F-207ENST00000417231 TTLL6Q8N841 843 aa26.11■■□□□ 1.77
UBE2F-207ENST00000417231 BRIP1Q9BX63 1249 aa26.11■■□□□ 1.77
UBE2F-207ENST00000417231 CNBD1Q8NA66 436 aa26.1■■□□□ 1.77
UBE2F-207ENST00000417231 ZNF622Q969S3 477 aaKnown RBP eCLIP26.1■■□□□ 1.77
UBE2F-207ENST00000417231 PRKRIP1Q9H875 184 aaPredicted RBP26.1■■□□□ 1.77
UBE2F-207ENST00000417231 TSPYL4Q9UJ04 414 aa26.1■■□□□ 1.77
UBE2F-207ENST00000417231 AFDNP55196 1824 aaKnown RBP26.09■■□□□ 1.77
UBE2F-207ENST00000417231 NRXN2Q9P2S2 1712 aa26.09■■□□□ 1.77
UBE2F-207ENST00000417231 PDE6BP35913 854 aa26.09■■□□□ 1.77
UBE2F-207ENST00000417231 WDR43Q15061 677 aaKnown RBP eCLIP26.09■■□□□ 1.77
UBE2F-207ENST00000417231 HLFQ16534 295 aa26.09■■□□□ 1.77
UBE2F-207ENST00000417231 CLEC4GQ6UXB4 293 aa26.09■■□□□ 1.77
UBE2F-207ENST00000417231 ADAMTS8Q9UP79 889 aa26.09■■□□□ 1.77
UBE2F-207ENST00000417231 FAM177BA6PVY3 158 aa26.08■■□□□ 1.77
UBE2F-207ENST00000417231 MYL6BP14649 208 aa26.08■■□□□ 1.77
UBE2F-207ENST00000417231 ZNF219Q9P2Y4 722 aaPredicted RBP26.08■■□□□ 1.77
UBE2F-207ENST00000417231 RASSF7Q02833 373 aa26.07■■□□□ 1.76
UBE2F-207ENST00000417231 RNF181Q9P0P0 153 aa26.07■■□□□ 1.76
UBE2F-207ENST00000417231 NIP7Q9Y221 180 aaKnown RBP eCLIP26.07■■□□□ 1.76
UBE2F-207ENST00000417231 ZNF652Q9Y2D9 606 aa26.07■■□□□ 1.76
UBE2F-207ENST00000417231 BRCA1P38398 1863 aaKnown RBP26.06■■□□□ 1.76
UBE2F-207ENST00000417231 DLG5Q8TDM6 1919 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms